Guide to the Human Genome
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Name: DBP Sequence: fasta or formatted (325aa) NCBI GI: 31542493
Description:

D site of albumin promoter (albumin D-box) binding protein

Referenced in:

Pituitary

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            12.0         39           2
 C cysteine            0.6          2           1
 D aspartate           4.0         13           1
 E glutamate           7.1         23           3
 F phenylalanine       1.8          6           1
 G glycine             9.5         31           3
 H histidine           2.2          7           1
 I isoleucine          1.2          4           1
 K lysine              4.6         15           2
 L leucine            10.5         34           3
 M methionine          0.9          3           1
 N asparagine          1.2          4           2
 P proline            14.5         47           4
 Q glutamine           2.8          9           1
 R arginine            8.3         27           2
 S serine              7.7         25           2
 T threonine           4.3         14           2
 V valine              4.6         15           2
 W tryptophan          0.6          2           1
 Y tyrosine            1.5          5           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   D site of albumin promoter (albumin D-box) binding p... 
HLF                   0.350   hepatic leukemia factor 
TEF                   0.308   thyrotrophic embryonic factor isoform 2 
TEF                   0.308   thyrotrophic embryonic factor isoform 1 
LOC100291212          0.064   PREDICTED: hypothetical protein XP_002347943 
NFIL3                 0.053   nuclear factor, interleukin 3 regulated 
UNCX                  0.050   UNC homeobox 
CEBPB                 0.049   CCAAT/enhancer binding protein beta 
TPRX1                 0.047   tetra-peptide repeat homeobox 
HCN2                  0.046   hyperpolarization activated cyclic nucleotide-gated...
EMID1                 0.046   EMI domain containing 1 
SFPQ                  0.042   splicing factor proline/glutamine rich (polypyrimidin...
CDKN1C                0.042   cyclin-dependent kinase inhibitor 1C isoform b [Hom...
CDKN1C                0.042   cyclin-dependent kinase inhibitor 1C isoform b [Hom...
CDKN1C                0.042   cyclin-dependent kinase inhibitor 1C isoform a 
CPSF6                 0.041   cleavage and polyadenylation specific factor 6, 68 ...
SGIP1                 0.041   SH3-domain GRB2-like (endophilin) interacting prote...
LOC440829             0.039   PREDICTED: transmembrane protein 46-like 
NACA                  0.039   nascent polypeptide-associated complex alpha subuni...
TAF4                  0.038   TBP-associated factor 4 
COL12A1               0.038   collagen, type XII, alpha 1 short isoform precursor ...
COL12A1               0.038   collagen, type XII, alpha 1 long isoform precursor [...
OGFR                  0.038   opioid growth factor receptor 
PRG4                  0.038   proteoglycan 4 isoform D 
PRG4                  0.038   proteoglycan 4 isoform C 
PRG4                  0.038   proteoglycan 4 isoform B 
PRG4                  0.038   proteoglycan 4 isoform A 
SMARCC2               0.038   SWI/SNF-related matrix-associated actin-dependent r...
SH3BP1                0.038   SH3-domain binding protein 1 
KAT2A                 0.036   general control of amino acid synthesis 5-like 2 [H...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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