Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: FOS Sequence: fasta or formatted (380aa) NCBI GI: 4885241
Description:

v-fos FBJ murine osteosarcoma viral oncogene homolog

Referenced in:

Ets Family
Jun / Fos Complexes
Retroviral Oncogene Homologs
RNA Metabolism

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            10.5         40           3
 C cysteine            2.1          8           1
 D aspartate           5.3         20           2
 E glutamate           8.2         31           4
 F phenylalanine       4.2         16           1
 G glycine             5.0         19           2
 H histidine           1.3          5           1
 I isoleucine          2.1          8           1
 K lysine              3.7         14           1
 L leucine             8.4         32           2
 M methionine          2.6         10           2
 N asparagine          2.1          8           1
 P proline             9.2         35           1
 Q glutamine           2.4          9           1
 R arginine            5.0         19           3
 S serine             14.5         55           3
 T threonine           6.3         24           1
 V valine              4.7         18           2
 W tryptophan          0.5          2           1
 Y tyrosine            1.8          7           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   v-fos FBJ murine osteosarcoma viral oncogene homolog ... 
FOSL2                 0.295   FOS-like antigen 2 
FOSB                  0.265   FBJ murine osteosarcoma viral oncogene homolog B is...
FOSB                  0.176   FBJ murine osteosarcoma viral oncogene homolog B is...
FOSL1                 0.168   FOS-like antigen 1 
ATF3                  0.075   activating transcription factor 3 isoform 1 
ATF3                  0.075   activating transcription factor 3 isoform 1 
JDP2                  0.071   Jun dimerization protein 2 isoform b 
JDP2                  0.071   Jun dimerization protein 2 isoform a 
JDP2                  0.071   Jun dimerization protein 2 isoform a 
JDP2                  0.071   Jun dimerization protein 2 isoform a 
BATF                  0.042   basic leucine zipper transcription factor, ATF-like [...
BATF3                 0.041   basic leucine zipper transcription factor, ATF-like 3...
ATF3                  0.037   activating transcription factor 3 isoform 2 
ATF2                  0.037   activating transcription factor 2 
ATF7                  0.033   activating transcription factor 7 isoform 3 
ATF7                  0.033   activating transcription factor 7 isoform 2 
ATF7                  0.033   activating transcription factor 7 isoform 1 
CREB5                 0.031   cAMP responsive element binding protein 5 isoform de...
CREB5                 0.031   cAMP responsive element binding protein 5 isoform be...
CREB5                 0.031   cAMP responsive element binding protein 5 isoform ga...
CREB5                 0.031   cAMP responsive element binding protein 5 isoform al...
HLF                   0.026   hepatic leukemia factor 
CEBPG                 0.026   CCAAT/enhancer binding protein gamma 
TEF                   0.025   thyrotrophic embryonic factor isoform 2 
TEF                   0.025   thyrotrophic embryonic factor isoform 1 
CEBPA                 0.025   CCAAT/enhancer binding protein alpha 
CREM                  0.021   cAMP responsive element modulator isoform v 
CREM                  0.021   cAMP responsive element modulator isoform p 
CREM                  0.021   cAMP responsive element modulator isoform n 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press