Guide to the Human Genome
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Name: ATF3 Sequence: fasta or formatted (181aa) NCBI GI: 71902536
Description:

activating transcription factor 3 isoform 1

Referenced in:

CREB / ATF Family
Jun / Fos Complexes

Other entries for this name:
alt mRNA [181aa] activating transcription factor 3 isoform 1
alt prot [135aa] activating transcription factor 3 isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.7         14           3
 C cysteine            2.8          5           1
 D aspartate           2.2          4           1
 E glutamate          12.2         22           2
 F phenylalanine       2.8          5           1
 G glycine             2.8          5           1
 H histidine           2.8          5           1
 I isoleucine          5.0          9           1
 K lysine              9.4         17           3
 L leucine             9.4         17           1
 M methionine          2.2          4           2
 N asparagine          5.0          9           1
 P proline             5.0          9           2
 Q glutamine           5.5         10           2
 R arginine            7.2         13           3
 S serine              7.7         14           2
 T threonine           3.9          7           1
 V valine              6.1         11           1
 W tryptophan          0.0          0           0
 Y tyrosine            0.6          1           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   activating transcription factor 3 isoform 1 
ATF3                  1.000   activating transcription factor 3 isoform 1 
ATF3                  0.619   activating transcription factor 3 isoform 2 
JDP2                  0.327   Jun dimerization protein 2 isoform b 
JDP2                  0.327   Jun dimerization protein 2 isoform a 
JDP2                  0.327   Jun dimerization protein 2 isoform a 
JDP2                  0.327   Jun dimerization protein 2 isoform a 
FOSL1                 0.189   FOS-like antigen 1 
FOSL2                 0.186   FOS-like antigen 2 
FOSB                  0.186   FBJ murine osteosarcoma viral oncogene homolog B is...
FOS                   0.165   v-fos FBJ murine osteosarcoma viral oncogene homolog ...
BATF                  0.123   basic leucine zipper transcription factor, ATF-like [...
BATF3                 0.117   basic leucine zipper transcription factor, ATF-like 3...
ATF2                  0.096   activating transcription factor 2 
ATF7                  0.090   activating transcription factor 7 isoform 3 
ATF7                  0.090   activating transcription factor 7 isoform 2 
ATF7                  0.090   activating transcription factor 7 isoform 1 
CREB3L1               0.090   cAMP responsive element binding protein 3-like 1 [Ho...
CREB5                 0.090   cAMP responsive element binding protein 5 isoform de...
CREB5                 0.090   cAMP responsive element binding protein 5 isoform be...
CREB5                 0.090   cAMP responsive element binding protein 5 isoform ga...
CREB5                 0.090   cAMP responsive element binding protein 5 isoform al...
ATF4                  0.072   activating transcription factor 4 
ATF4                  0.072   activating transcription factor 4 
CREB3L2               0.072   cAMP responsive element binding protein 3-like 2 [Ho...
ATF5                  0.066   activating transcription factor 5 
JUND                  0.057   jun D proto-oncogene 
JUN                   0.057   jun oncogene 
CREM                  0.051   cAMP responsive element modulator isoform j 
CREM                  0.051   cAMP responsive element modulator isoform i 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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