CDR1 28186

Name: CDR1	Sequence: fasta or formatted (262aa)		NCBI GI: 44889483
Description: cerebellar degeneration-related protein 1, 34kDa		Referenced in: Cerebellum Protein Composition and Structure
Composition: Amino acid Percentage Count Longest homopolymer A alanine 2.3 6 1 C cysteine 0.8 2 1 D aspartate 13.7 36 1 E glutamate 8.8 23 1 F phenylalanine 8.0 21 2 G glycine 7.6 20 2 H histidine 0.4 1 1 I isoleucine 5.3 14 1 K lysine 5.3 14 1 L leucine 15.3 40 2 M methionine 2.7 7 1 N asparagine 0.4 1 1 P proline 2.7 7 1 Q glutamine 0.0 0 0 R arginine 7.3 19 3 S serine 4.2 11 1 T threonine 5.7 15 1 V valine 2.3 6 1 W tryptophan 6.5 17 1 Y tyrosine 0.8 2 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 cerebellar degeneration-related protein 1, 34kDa [Ho... FLJ32682 0.052 hypothetical protein LOC220081 MTMR8 0.019 myotubularin related protein 8 MPHOSPH10 0.017 M-phase phosphoprotein 10 PELP1 0.017 proline, glutamic acid and leucine rich protein 1 [... COL6A2 0.015 alpha 2 type VI collagen isoform 2C2a' precursor [H... COL6A2 0.015 alpha 2 type VI collagen isoform 2C2a precursor [Ho... COL6A2 0.015 alpha 2 type VI collagen isoform 2C2 precursor [Hom... CCNB3 0.015 cyclin B3 isoform 3 COL21A1 0.015 collagen, type XXI, alpha 1 precursor COL9A3 0.015 alpha 3 type IX collagen COL7A1 0.013 alpha 1 type VII collagen precursor CA9 0.013 carbonic anhydrase IX precursor EZH2 0.013 enhancer of zeste 2 isoform a COL16A1 0.013 alpha 1 type XVI collagen precursor COL4A2 0.013 alpha 2 type IV collagen preproprotein MYT1L 0.013 myelin transcription factor 1-like ASXL3 0.013 additional sex combs like 3 NCL 0.013 nucleolin COL4A6 0.011 type IV alpha 6 collagen isoform A precursor COL27A1 0.011 collagen, type XXVII, alpha 1 COL4A6 0.011 type IV alpha 6 collagen isoform B precursor COL24A1 0.011 collagen, type XXIV, alpha 1 COL29A1 0.011 collagen, type XXIX, alpha 1 COL3A1 0.011 collagen type III alpha 1 preproprotein COL4A5 0.011 type IV collagen alpha 5 isoform 2 precursor COL4A5 0.011 type IV collagen alpha 5 isoform 1 precursor COL4A5 0.011 type IV collagen alpha 5 isoform 3 precursor KIAA1751 0.009 hypothetical protein LOC85452 COL2A1 0.009 collagen, type II, alpha 1 isoform 1 precursor [Hom... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.