Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: KIAA1751 Sequence: fasta or formatted (762aa) NCBI GI: 122937416
Description:

hypothetical protein LOC85452

Not currently referenced in the text

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.9         60           3
 C cysteine            1.4         11           1
 D aspartate           6.3         48           2
 E glutamate          12.9         98           3
 F phenylalanine       3.3         25           1
 G glycine             5.6         43           2
 H histidine           2.0         15           1
 I isoleucine          3.1         24           2
 K lysine              7.9         60           3
 L leucine            10.5         80           3
 M methionine          1.7         13           1
 N asparagine          2.2         17           1
 P proline             3.4         26           2
 Q glutamine           5.4         41           2
 R arginine            8.1         62           3
 S serine              5.9         45           3
 T threonine           5.1         39           2
 V valine              4.9         37           2
 W tryptophan          0.8          6           1
 Y tyrosine            1.6         12           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   hypothetical protein LOC85452 
TCHH                  0.033   trichohyalin 
MYH14                 0.029   myosin, heavy chain 14 isoform 1 
MYH14                 0.029   myosin, heavy chain 14 isoform 2 
MYH14                 0.029   myosin, heavy chain 14 isoform 3 
PLEC1                 0.026   plectin 1 isoform 11 
PLEC1                 0.026   plectin 1 isoform 10 
PLEC1                 0.026   plectin 1 isoform 8 
PLEC1                 0.026   plectin 1 isoform 7 
PLEC1                 0.026   plectin 1 isoform 6 
PLEC1                 0.026   plectin 1 isoform 3 
PLEC1                 0.026   plectin 1 isoform 2 
PLEC1                 0.026   plectin 1 isoform 1 
MYH11                 0.026   smooth muscle myosin heavy chain 11 isoform SM1A [Ho...
MYH11                 0.026   smooth muscle myosin heavy chain 11 isoform SM1B [Ho...
MYH11                 0.026   smooth muscle myosin heavy chain 11 isoform SM2B [Ho...
MYH11                 0.026   smooth muscle myosin heavy chain 11 isoform SM2A [Ho...
LOC283767             0.026   golgi autoantigen, golgin subfamily a-like 
LOC727832             0.026   golgi autoantigen, golgin subfamily a-like 
ITSN1                 0.026   intersectin 1 isoform ITSN-s 
ITSN1                 0.026   intersectin 1 isoform ITSN-l 
MYH8                  0.026   myosin, heavy chain 8, skeletal muscle, perinatal [...
LOC440243             0.025   PREDICTED: Putative golgin subfamily A member 6-lik...
MNS1                  0.025   meiosis-specific nuclear structural 1 
LOC400352             0.024   PREDICTED: similar to Putative golgin subfamily A m...
LOC100132816          0.024   PREDICTED: similar to Putative golgin subfamily A m...
LOC645202             0.024   PREDICTED: hypothetical protein LOC645202 
MYH7                  0.024   myosin, heavy chain 7, cardiac muscle, beta 
CCDC46                0.022   coiled-coil domain containing 46 isoform a 
GIGYF2                0.022   GRB10 interacting GYF protein 2 isoform c 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press