Guide to the Human Genome
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Name: ASXL3 Sequence: fasta or formatted (2248aa) NCBI GI: 149944526
Description:

additional sex combs like 3

Referenced in:

Stem Cells and Early Development

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.1        160           6
 C cysteine            2.0         45           1
 D aspartate           3.4         77           2
 E glutamate           8.3        186           2
 F phenylalanine       2.2         50           2
 G glycine             5.0        113           2
 H histidine           2.3         51           1
 I isoleucine          4.3         96           2
 K lysine              6.5        147           3
 L leucine             8.1        181           5
 M methionine          2.3         52           2
 N asparagine          4.4        100           2
 P proline             8.8        197          12
 Q glutamine           5.2        117           5
 R arginine            3.4         76           2
 S serine             13.6        306           4
 T threonine           6.9        156           3
 V valine              5.1        114           2
 W tryptophan          0.3          7           1
 Y tyrosine            0.8         17           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   additional sex combs like 3 
ASXL2                 0.075   additional sex combs like 2 
ASXL1                 0.070   additional sex combs like 1 
MUC17                 0.024   mucin 17 
MUC12                 0.014   PREDICTED: mucin 12 
TCOF1                 0.013   Treacher Collins-Franceschetti syndrome 1 isoform e...
TCOF1                 0.013   Treacher Collins-Franceschetti syndrome 1 isoform a ...
TCOF1                 0.013   Treacher Collins-Franceschetti syndrome 1 isoform d...
MUC4                  0.012   mucin 4 isoform a 
TCOF1                 0.012   Treacher Collins-Franceschetti syndrome 1 isoform f...
TCOF1                 0.012   Treacher Collins-Franceschetti syndrome 1 isoform b ...
DSPP                  0.012   dentin sialophosphoprotein preproprotein 
MUC16                 0.012   mucin 16 
LOC100294236          0.012   PREDICTED: similar to diffuse panbronchiolitis crit...
MUC12                 0.012   PREDICTED: mucin 12, cell surface associated 
TCOF1                 0.012   Treacher Collins-Franceschetti syndrome 1 isoform c ...
LOC729792             0.010   PREDICTED: hypothetical protein 
LOC100294249          0.010   PREDICTED: hypothetical protein XP_002344067 
LOC100294136          0.010   PREDICTED: hypothetical protein 
LOC100294091          0.010   PREDICTED: hypothetical protein 
LOC729792             0.010   PREDICTED: hypothetical protein 
LOC730401             0.010   PREDICTED: hypothetical protein 
LOC729792             0.010   PREDICTED: hypothetical protein 
LOC100294501          0.010   PREDICTED: hypothetical protein 
LOC100294238          0.010   PREDICTED: hypothetical protein 
LOC100294204          0.010   PREDICTED: hypothetical protein 
MDC1                  0.010   mediator of DNA-damage checkpoint 1 
MUC12                 0.009   PREDICTED: mucin 12 
FMNL2                 0.009   formin-like 2 
WASF2                 0.009   WAS protein family, member 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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