Guide to the Human Genome
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Name: CCNB3 Sequence: fasta or formatted (1395aa) NCBI GI: 90669307
Description:

cyclin B3 isoform 3

Referenced in:

Cyclins and Related Functions
Spindle, M phase, and Meiosis

Other entries for this name:
alt prot [291aa] cyclin B3 isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.4         75           3
 C cysteine            1.5         21           1
 D aspartate           2.9         41           2
 E glutamate          11.8        165           3
 F phenylalanine       3.9         55           2
 G glycine             1.9         27           1
 H histidine           2.1         29           2
 I isoleucine          4.9         69           1
 K lysine             12.3        171           3
 L leucine            11.6        162           3
 M methionine          2.9         40           2
 N asparagine          2.7         37           1
 P proline             5.7         80           2
 Q glutamine           4.3         60           1
 R arginine            1.6         23           2
 S serine             10.0        140           2
 T threonine           8.1        113           3
 V valine              4.2         58           2
 W tryptophan          0.3          4           1
 Y tyrosine            1.8         25           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   cyclin B3 isoform 3 
CCNB3                 0.158   cyclin B3 isoform 1 
CCNB1                 0.059   cyclin B1 
CCNB2                 0.052   cyclin B2 
CCNA1                 0.050   cyclin A1 isoform c 
CCNA1                 0.050   cyclin A1 isoform c 
CCNA1                 0.050   cyclin A1 isoform b 
CCNA1                 0.050   cyclin A1 isoform a 
CCNA2                 0.044   cyclin A 
GOLGA4                0.026   golgi autoantigen, golgin subfamily a, 4 
CCNF                  0.024   cyclin F 
CCNO                  0.023   cyclin domain containing 
WDR87                 0.022   NYD-SP11 protein 
CNTD2                 0.021   cyclin N-terminal domain containing 2 isoform 2 [Ho...
CCNE1                 0.020   cyclin E1 isoform 1 
CCNE1                 0.020   cyclin E1 isoform 2 
CCNE2                 0.019   cyclin E2 
FHAD1                 0.019   forkhead-associated (FHA) phosphopeptide binding do...
CROCC                 0.015   ciliary rootlet coiled-coil 
CCND1                 0.015   cyclin D1 
PPL                   0.013   periplakin 
BOD1L                 0.013   biorientation of chromosomes in cell division 1-like...
ZAN                   0.013   zonadhesin isoform 3 
ZAN                   0.013   zonadhesin isoform 6 
EEA1                  0.013   early endosome antigen 1, 162kD 
FLJ32682              0.013   hypothetical protein LOC220081 
CCDC88A               0.013   coiled-coil domain containing 88A isoform 2 
SLK                   0.012   serine/threonine kinase 2 
NEFH                  0.012   neurofilament, heavy polypeptide 200kDa 
CCDC88A               0.012   coiled-coil domain containing 88A isoform 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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