Guide to the Human Genome
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Name: CA9 Sequence: fasta or formatted (459aa) NCBI GI: 169636420
Description:

carbonic anhydrase IX precursor

Referenced in:

Carbonic Anhydrases

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.5         39           2
 C cysteine            1.1          5           1
 D aspartate           5.0         23           2
 E glutamate           9.8         45           3
 F phenylalanine       3.1         14           1
 G glycine             9.2         42           3
 H histidine           2.6         12           1
 I isoleucine          1.7          8           1
 K lysine              1.3          6           1
 L leucine            13.9         64           4
 M methionine          1.1          5           1
 N asparagine          2.0          9           2
 P proline            11.3         52           2
 Q glutamine           4.8         22           1
 R arginine            6.1         28           2
 S serine              6.8         31           2
 T threonine           3.5         16           2
 V valine              5.7         26           2
 W tryptophan          1.3          6           1
 Y tyrosine            1.3          6           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   carbonic anhydrase IX precursor 
CA14                  0.206   carbonic anhydrase XIV precursor 
CA12                  0.193   carbonic anhydrase XII isoform 1 precursor 
CA12                  0.189   carbonic anhydrase XII isoform 2 precursor 
CA6                   0.183   carbonic anhydrase VI precursor 
CA7                   0.143   carbonic anhydrase VII isoform 1 
CA8                   0.143   carbonic anhydrase VIII 
CA2                   0.132   carbonic anhydrase II 
CA13                  0.129   carbonic anhydrase XIII 
CA1                   0.122   carbonic anhydrase I 
CA1                   0.122   carbonic anhydrase I 
CA1                   0.122   carbonic anhydrase I 
CA1                   0.122   carbonic anhydrase I 
CA7                   0.115   carbonic anhydrase VII isoform 2 
CA3                   0.115   carbonic anhydrase III 
CA5B                  0.115   carbonic anhydrase VB, mitochondrial precursor 
CA5A                  0.110   carbonic anhydrase VA, mitochondrial precursor 
PTPRG                 0.109   protein tyrosine phosphatase, receptor type, G prec...
PTPRZ1                0.099   protein tyrosine phosphatase, receptor-type, zeta1 p...
CA4                   0.094   carbonic anhydrase IV precursor 
CA10                  0.081   carbonic anhydrase X 
CA10                  0.081   carbonic anhydrase X 
CA10                  0.081   carbonic anhydrase X 
CA11                  0.077   carbonic anhydrase XI precursor 
LOC647020             0.027   PREDICTED: similar to acidic (leucine-rich) nuclear...
LOC647020             0.027   PREDICTED: similar to acidic (leucine-rich) nuclear...
FSCB                  0.024   fibrous sheath CABYR binding protein 
TTN                   0.024   titin isoform N2-A 
MYST4                 0.022   MYST histone acetyltransferase (monocytic leukemia)...
AP3D1                 0.022   adaptor-related protein complex 3, delta 1 subunit ...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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