Guide to the Human Genome
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Name: ESYT1 Sequence: fasta or formatted (1104aa) NCBI GI: 14149680
Description:

extended synaptotagmin-like protein 1

Referenced in:

ER, Golgi, and the Secretory Pathway

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.8         64           3
 C cysteine            0.8          9           1
 D aspartate           6.4         71           2
 E glutamate           6.8         75           2
 F phenylalanine       3.0         33           2
 G glycine             6.8         75           2
 H histidine           2.1         23           1
 I isoleucine          3.2         35           2
 K lysine              4.8         53           2
 L leucine            14.0        155           4
 M methionine          1.5         17           1
 N asparagine          2.0         22           1
 P proline             7.1         78           2
 Q glutamine           4.9         54           1
 R arginine            6.2         69           2
 S serine              8.5         94           4
 T threonine           4.3         47           2
 V valine              8.1         89           2
 W tryptophan          1.8         20           1
 Y tyrosine            1.9         21           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   extended synaptotagmin-like protein 1 
ESYT2                 0.260   family with sequence similarity 62 (C2 domain contai...
ESYT3                 0.201   family with sequence similarity 62 (C2 domain conta...
MCTP2                 0.035   multiple C2 domains, transmembrane 2 isoform 2 [Hom...
MCTP2                 0.035   multiple C2 domains, transmembrane 2 isoform 1 [Hom...
MCTP1                 0.030   multiple C2 domains, transmembrane 1 isoform S [Homo...
MCTP1                 0.030   multiple C2 domains, transmembrane 1 isoform L [Hom...
PIK3C2B               0.025   phosphoinositide-3-kinase, class 2 beta polypeptide...
RIMS2                 0.023   regulating synaptic membrane exocytosis 2 isoform b...
RIMS2                 0.021   regulating synaptic membrane exocytosis 2 isoform a...
RIMS1                 0.020   regulating synaptic membrane exocytosis 1 
LOC100132214          0.020   PREDICTED: similar to calcium-promoted Ras inactiva...
LOC100132214          0.020   PREDICTED: similar to calcium-promoted Ras inactiva...
RPH3A                 0.020   rabphilin 3A homolog isoform 1 
RPH3A                 0.020   rabphilin 3A homolog isoform 2 
RASA4                 0.020   RAS p21 protein activator 4 isoform 2 
RASA4                 0.020   RAS p21 protein activator 4 isoform 1 
DOC2B                 0.020   double C2-like domains, beta 
MCTP2                 0.019   multiple C2 domains, transmembrane 2 isoform 3 [Hom...
PIK3C2A               0.018   phosphoinositide-3-kinase, class 2 alpha polypeptid...
LOC100132214          0.018   PREDICTED: similar to calcium-promoted Ras inactiva...
LOC100132214          0.018   PREDICTED: similar to calcium-promoted Ras inactiva...
SYT6                  0.018   synaptotagmin VI 
SYT3                  0.017   synaptotagmin III 
SYT3                  0.017   synaptotagmin III 
SYT3                  0.017   synaptotagmin III 
SYT10                 0.017   synaptotagmin X 
ITSN2                 0.017   intersectin 2 isoform 3 
ITSN2                 0.017   intersectin 2 isoform 1 
DOC2A                 0.016   double C2-like domains, alpha 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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