BLASTP 2.2.11 [Jun-05-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= gi|33620745 pre-mRNA cleavage complex II protein Pcf11 [Homo sapiens] (1555 letters) Database: hs.faa 37,866 sequences; 18,247,518 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|33620745 pre-mRNA cleavage complex II protein Pcf11 [Homo sap... 3179 0.0 gi|4502955 type IV collagen alpha 5 isoform 1 precursor [Homo sa... 104 8e-22 gi|15890088 type IV collagen alpha 5 isoform 3 precursor [Homo s... 104 8e-22 gi|15890086 type IV collagen alpha 5 isoform 2 precursor [Homo s... 103 1e-21 gi|154759255 collagen, type XXVIII precursor [Homo sapiens] 102 3e-21 gi|89276751 alpha 1 type V collagen preproprotein [Homo sapiens] 102 4e-21 gi|111118976 collagen, type II, alpha 1 isoform 1 precursor [Hom... 101 5e-21 gi|111118974 collagen, type II, alpha 1 isoform 2 precursor [Hom... 101 5e-21 gi|111118972 collagen, type XI, alpha 2 isoform 2 preproprotein ... 101 6e-21 gi|111118968 collagen, type XI, alpha 2 isoform 3 preproprotein ... 101 6e-21 gi|111118970 collagen, type XI, alpha 2 isoform 1 preproprotein ... 101 6e-21 gi|148536825 alpha 1 type IV collagen preproprotein [Homo sapiens] 100 8e-21 gi|32895368 alpha 1 type VIII collagen precursor [Homo sapiens] 100 8e-21 gi|17738302 alpha 1 type VIII collagen precursor [Homo sapiens] 100 8e-21 gi|110735435 collagen, type V, alpha 3 preproprotein [Homo sapiens] 100 1e-20 gi|110349772 alpha 1 type I collagen preproprotein [Homo sapiens] 99 4e-20 gi|98985810 alpha 1 type XI collagen isoform B preproprotein [Ho... 99 4e-20 gi|98985808 alpha 1 type XI collagen isoform C preproprotein [Ho... 99 4e-20 gi|98985806 alpha 1 type XI collagen isoform A preproprotein [Ho... 99 4e-20 gi|40805823 collagen, type XXII, alpha 1 [Homo sapiens] 98 5e-20 gi|89363017 alpha 2 type V collagen preproprotein [Homo sapiens] 97 9e-20 gi|119508426 alpha 3 type IX collagen [Homo sapiens] 97 9e-20 gi|116089325 splicing factor, arginine/serine-rich 12 isoform a ... 97 1e-19 gi|21040255 splicing factor, arginine/serine-rich 12 isoform b [... 97 1e-19 gi|32140760 collagen, type XXVII, alpha 1 [Homo sapiens] 97 2e-19 gi|4502951 collagen type III alpha 1 preproprotein [Homo sapiens] 96 4e-19 gi|239754955 PREDICTED: similar to COL22A1 protein [Homo sapiens] 95 5e-19 gi|116256356 alpha 4 type IV collagen precursor [Homo sapiens] 94 8e-19 gi|4502961 alpha 1 type VII collagen precursor [Homo sapiens] 94 1e-18 gi|89142737 alpha 3 type IV collagen isoform 5 precursor [Homo s... 94 1e-18 >gi|33620745 pre-mRNA cleavage complex II protein Pcf11 [Homo sapiens] Length = 1555 Score = 3179 bits (8242), Expect = 0.0 Identities = 1555/1555 (100%), Positives = 1555/1555 (100%) Query: 1 MSEQTPAEAGAAGAREDACRDYQSSLEDLTFNSKPHINMLTILAEENLPFAKEIVSLIEA 60 MSEQTPAEAGAAGAREDACRDYQSSLEDLTFNSKPHINMLTILAEENLPFAKEIVSLIEA Sbjct: 1 MSEQTPAEAGAAGAREDACRDYQSSLEDLTFNSKPHINMLTILAEENLPFAKEIVSLIEA 60 Query: 61 QTAKAPSSEKLPVMYLMDSIVKNVGREYLTAFTKNLVATFICVFEKVDENTRKSLFKLRS 120 QTAKAPSSEKLPVMYLMDSIVKNVGREYLTAFTKNLVATFICVFEKVDENTRKSLFKLRS Sbjct: 61 QTAKAPSSEKLPVMYLMDSIVKNVGREYLTAFTKNLVATFICVFEKVDENTRKSLFKLRS 120 Query: 121 TWDEIFPLKKLYALDVRVNSLDPAWPIKPLPPNVNTSSIHVNPKFLNKSPEEPSTPGTVV 180 TWDEIFPLKKLYALDVRVNSLDPAWPIKPLPPNVNTSSIHVNPKFLNKSPEEPSTPGTVV Sbjct: 121 TWDEIFPLKKLYALDVRVNSLDPAWPIKPLPPNVNTSSIHVNPKFLNKSPEEPSTPGTVV 180 Query: 181 SSPSISTPPIVPDIQKNLTQEQLIRQQLLAKQKQLLELQQKKLELELEQAKAQLAVSLSV 240 SSPSISTPPIVPDIQKNLTQEQLIRQQLLAKQKQLLELQQKKLELELEQAKAQLAVSLSV Sbjct: 181 SSPSISTPPIVPDIQKNLTQEQLIRQQLLAKQKQLLELQQKKLELELEQAKAQLAVSLSV 240 Query: 241 QQETSNLGPGSAPSKLHVSQIPPMAVKAPHQVPVQSEKSRPGPSLQIQDLKGTNRDPRLN 300 QQETSNLGPGSAPSKLHVSQIPPMAVKAPHQVPVQSEKSRPGPSLQIQDLKGTNRDPRLN Sbjct: 241 QQETSNLGPGSAPSKLHVSQIPPMAVKAPHQVPVQSEKSRPGPSLQIQDLKGTNRDPRLN 300 Query: 301 RISQHSHGKDQSHRKEFLMNTLNQSDTKTSKTIPSEKLNSSKQEKSKSGEKITKKELDQL 360 RISQHSHGKDQSHRKEFLMNTLNQSDTKTSKTIPSEKLNSSKQEKSKSGEKITKKELDQL Sbjct: 301 RISQHSHGKDQSHRKEFLMNTLNQSDTKTSKTIPSEKLNSSKQEKSKSGEKITKKELDQL 360 Query: 361 DSKSKSKSKSPSPLKNKLSHTKDLKNQESESMRLSDMNKRDPRLKKHLQDKTDGKDDDVK 420 DSKSKSKSKSPSPLKNKLSHTKDLKNQESESMRLSDMNKRDPRLKKHLQDKTDGKDDDVK Sbjct: 361 DSKSKSKSKSPSPLKNKLSHTKDLKNQESESMRLSDMNKRDPRLKKHLQDKTDGKDDDVK 420 Query: 421 EKRKTAEKKDKDEHMKSSEHRLAGSRNKIINGIVQKQDTITEESEKQGTKPGRSSTRKRS 480 EKRKTAEKKDKDEHMKSSEHRLAGSRNKIINGIVQKQDTITEESEKQGTKPGRSSTRKRS Sbjct: 421 EKRKTAEKKDKDEHMKSSEHRLAGSRNKIINGIVQKQDTITEESEKQGTKPGRSSTRKRS 480 Query: 481 RSRSPKSRSPIIHSPKRRDRRSPKRRQRSMSPTSTPKAGKIRQSGAKQSHMEEFTPPSRE 540 RSRSPKSRSPIIHSPKRRDRRSPKRRQRSMSPTSTPKAGKIRQSGAKQSHMEEFTPPSRE Sbjct: 481 RSRSPKSRSPIIHSPKRRDRRSPKRRQRSMSPTSTPKAGKIRQSGAKQSHMEEFTPPSRE 540 Query: 541 DRNAKRSTKQDIRDPRRMKKTEEERPQETTNQHSTKSGTEPKENVENWQSSKSAKRWKSG 600 DRNAKRSTKQDIRDPRRMKKTEEERPQETTNQHSTKSGTEPKENVENWQSSKSAKRWKSG Sbjct: 541 DRNAKRSTKQDIRDPRRMKKTEEERPQETTNQHSTKSGTEPKENVENWQSSKSAKRWKSG 600 Query: 601 WEENKSLQQVDEHSKPPHLRHRESWSSTKGILSPRAPKQQQHRLSVDANLQIPKELTLAS 660 WEENKSLQQVDEHSKPPHLRHRESWSSTKGILSPRAPKQQQHRLSVDANLQIPKELTLAS Sbjct: 601 WEENKSLQQVDEHSKPPHLRHRESWSSTKGILSPRAPKQQQHRLSVDANLQIPKELTLAS 660 Query: 661 KRELLQKTSERLASGEITQDDFLVVVHQIRQLFQYQEGVREEQRSPFNDRFPLKRPRYED 720 KRELLQKTSERLASGEITQDDFLVVVHQIRQLFQYQEGVREEQRSPFNDRFPLKRPRYED Sbjct: 661 KRELLQKTSERLASGEITQDDFLVVVHQIRQLFQYQEGVREEQRSPFNDRFPLKRPRYED 720 Query: 721 SDKPFVDSPASRFAGLDTNQRLTALAEDRPLFDGPSRPSVARDGPTKMIFEGPNKLSPRI 780 SDKPFVDSPASRFAGLDTNQRLTALAEDRPLFDGPSRPSVARDGPTKMIFEGPNKLSPRI Sbjct: 721 SDKPFVDSPASRFAGLDTNQRLTALAEDRPLFDGPSRPSVARDGPTKMIFEGPNKLSPRI 780 Query: 781 DGPPTPASLRFDGSPGQMGGGGPLRFEGPQGQLGGGCPLRFEGPPGPVGTPLRFEGPIGQ 840 DGPPTPASLRFDGSPGQMGGGGPLRFEGPQGQLGGGCPLRFEGPPGPVGTPLRFEGPIGQ Sbjct: 781 DGPPTPASLRFDGSPGQMGGGGPLRFEGPQGQLGGGCPLRFEGPPGPVGTPLRFEGPIGQ 840 Query: 841 AGGGGFRFEGSPGLRFEGSPGGLRFEGPGGQPVGGLRFEGHRGQPVGGLRFEGPHGQPVG 900 AGGGGFRFEGSPGLRFEGSPGGLRFEGPGGQPVGGLRFEGHRGQPVGGLRFEGPHGQPVG Sbjct: 841 AGGGGFRFEGSPGLRFEGSPGGLRFEGPGGQPVGGLRFEGHRGQPVGGLRFEGPHGQPVG 900 Query: 901 GLRFDNPRGQPVGGLRFEGGHGPSGAAIRFDGPHGQPGGGIRFEGPLLQQGVGMRFEGPH 960 GLRFDNPRGQPVGGLRFEGGHGPSGAAIRFDGPHGQPGGGIRFEGPLLQQGVGMRFEGPH Sbjct: 901 GLRFDNPRGQPVGGLRFEGGHGPSGAAIRFDGPHGQPGGGIRFEGPLLQQGVGMRFEGPH 960 Query: 961 GQSVAGLRFEGQHNQLGGNLRFEGPHGQPGVGIRFEGPLVQQGGGMRFEGPSVPGGGLRI 1020 GQSVAGLRFEGQHNQLGGNLRFEGPHGQPGVGIRFEGPLVQQGGGMRFEGPSVPGGGLRI Sbjct: 961 GQSVAGLRFEGQHNQLGGNLRFEGPHGQPGVGIRFEGPLVQQGGGMRFEGPSVPGGGLRI 1020 Query: 1021 EGPLGQGGPRFEGCHALRFDGQPGQPSLLPRFDGLHGQPGPRFERTPGQPGPQRFDGPPG 1080 EGPLGQGGPRFEGCHALRFDGQPGQPSLLPRFDGLHGQPGPRFERTPGQPGPQRFDGPPG Sbjct: 1021 EGPLGQGGPRFEGCHALRFDGQPGQPSLLPRFDGLHGQPGPRFERTPGQPGPQRFDGPPG 1080 Query: 1081 QQVQPRFDGVPQRFDGPQHQQASRFDIPLGLQGTRFDNHPSQRLESVSFNQTGPYNDPPG 1140 QQVQPRFDGVPQRFDGPQHQQASRFDIPLGLQGTRFDNHPSQRLESVSFNQTGPYNDPPG Sbjct: 1081 QQVQPRFDGVPQRFDGPQHQQASRFDIPLGLQGTRFDNHPSQRLESVSFNQTGPYNDPPG 1140 Query: 1141 NAFNAPSQGLQFQRHEQIFDSPQGPNFNGPHGPGNQSFSNPLNRASGHYFDEKNLQSSQF 1200 NAFNAPSQGLQFQRHEQIFDSPQGPNFNGPHGPGNQSFSNPLNRASGHYFDEKNLQSSQF Sbjct: 1141 NAFNAPSQGLQFQRHEQIFDSPQGPNFNGPHGPGNQSFSNPLNRASGHYFDEKNLQSSQF 1200 Query: 1201 GNFGNIPAPMTVGNIQASQQVLSGVAQPVAFGQGQQFLPVHPQNPGFVQNPSGALPKAYP 1260 GNFGNIPAPMTVGNIQASQQVLSGVAQPVAFGQGQQFLPVHPQNPGFVQNPSGALPKAYP Sbjct: 1201 GNFGNIPAPMTVGNIQASQQVLSGVAQPVAFGQGQQFLPVHPQNPGFVQNPSGALPKAYP 1260 Query: 1261 DNHLSQVDVNELFSKLLKTGILKLSQTDSATTQVSEVTAQPPPEEEEDQNEDQDVPDLTN 1320 DNHLSQVDVNELFSKLLKTGILKLSQTDSATTQVSEVTAQPPPEEEEDQNEDQDVPDLTN Sbjct: 1261 DNHLSQVDVNELFSKLLKTGILKLSQTDSATTQVSEVTAQPPPEEEEDQNEDQDVPDLTN 1320 Query: 1321 FTVEELKQRYDSVINRLYTGIQCYSCGMRFTTSQTDVYADHLDWHYRQNRTEKDVSRKVT 1380 FTVEELKQRYDSVINRLYTGIQCYSCGMRFTTSQTDVYADHLDWHYRQNRTEKDVSRKVT Sbjct: 1321 FTVEELKQRYDSVINRLYTGIQCYSCGMRFTTSQTDVYADHLDWHYRQNRTEKDVSRKVT 1380 Query: 1381 HRRWYYSLTDWIEFEEIADLEERAKSQFFEKVHEEVVLKTQEAAKEKEFQSVPAGPAGAV 1440 HRRWYYSLTDWIEFEEIADLEERAKSQFFEKVHEEVVLKTQEAAKEKEFQSVPAGPAGAV Sbjct: 1381 HRRWYYSLTDWIEFEEIADLEERAKSQFFEKVHEEVVLKTQEAAKEKEFQSVPAGPAGAV 1440 Query: 1441 ESCEICQEQFEQYWDEEEEEWHLKNAIRVDGKIYHPSCYEDYQNTSSFDCTPSPSKTPVE 1500 ESCEICQEQFEQYWDEEEEEWHLKNAIRVDGKIYHPSCYEDYQNTSSFDCTPSPSKTPVE Sbjct: 1441 ESCEICQEQFEQYWDEEEEEWHLKNAIRVDGKIYHPSCYEDYQNTSSFDCTPSPSKTPVE 1500 Query: 1501 NPLNIMLNIVKNELQEPCDSPKVKEERIDTPPACTEESIATPSEIKTENDTVESV 1555 NPLNIMLNIVKNELQEPCDSPKVKEERIDTPPACTEESIATPSEIKTENDTVESV Sbjct: 1501 NPLNIMLNIVKNELQEPCDSPKVKEERIDTPPACTEESIATPSEIKTENDTVESV 1555 >gi|4502955 type IV collagen alpha 5 isoform 1 precursor [Homo sapiens] Length = 1685 Score = 104 bits (259), Expect = 8e-22 Identities = 146/474 (30%), Positives = 176/474 (37%), Gaps = 90/474 (18%) Query: 778 PRIDGPPTPASLRFDGSPGQMGGGGPLRFEGPQGQLGGGCPLRFEGPPGPVGTPLR---- 833 P + GPP P G PGQ G GP +G G +G P EGPPGP G P + Sbjct: 999 PGLPGPPGPKGN--PGLPGQPGLIGPPGLKGTIGDMGFPGPQGVEGPPGPSGVPGQPGSP 1056 Query: 834 -FEGPIGQAGGGGFRFEGSPGL-------RFEGSPGGLRFEGPGGQP-VGGL-RFEGHRG 883 G G G G G PGL G PG +G G P + GL G +G Sbjct: 1057 GLPGQKGDKGDPGISSIGLPGLPGPKGEPGLPGYPGNPGIKGSVGDPGLPGLPGTPGAKG 1116 Query: 884 QPVGGLRFEGPHGQPVGGLRFDNPRGQPVGGLRFEGGHGPSGAAIRFDGPHGQPG--GGI 941 QP G F G G P G P G P GL E G G GP G+ G G Sbjct: 1117 QP-GLPGFPGTPGPP-GPKGISGPPGNP--GLPGEPGPVGGGGHPGQPGPPGEKGKPGQD 1172 Query: 942 RFEGPLLQQG----VGMRFEGPHG-QSVAGLRFEGQHNQLGGNLRFEGPHGQPGV----G 992 GP Q+G G GP G ++G + +G + GN GP G+PG G Sbjct: 1173 GIPGPAGQKGEPGQPGFGNPGPPGLPGLSGQKGDGGLPGIPGNPGLPGPKGEPGFHGFPG 1232 Query: 993 IR-------FEGPLVQQGGGMRFEGPSVPGGGLRIEGPLGQGGPRFEGCHALRFD-GQPG 1044 ++ GP ++ G GP P G + GP +G P G ++ + G PG Sbjct: 1233 VQGPPGPPGSPGPALE--GPKGNPGPQGPPGRPGLPGP--EGPPGLPGNGGIKGEKGNPG 1288 Query: 1045 QPSLLPRFDGLHGQPG-PRFERTPGQPGPQRFDGPPGQQVQPRFDGV------------- 1090 QP LP GL G G P + PG+PG G PG P F G+ Sbjct: 1289 QPG-LPGLPGLKGDQGPPGLQGNPGRPGLNGMKGDPGLPGVPGFPGMKGPSGVPGSAGPE 1347 Query: 1091 ----------PQRFDGPQHQ------QASRFDIP--LGLQGTRFDNHPSQRLESVSFNQT 1132 P GP Q A IP GL+G P Q L T Sbjct: 1348 GEPGLIGPPGPPGLPGPSGQSIIIKGDAGPPGIPGQPGLKGLPGPQGP-QGLP----GPT 1402 Query: 1133 GPYNDPPGNAF--------NAPSQGLQFQRHEQIFDSPQGPN-FNGPHGPGNQS 1177 GP DP N GL Q + D P GP+ GP GP S Sbjct: 1403 GPPGDPGRNGLPGFDGAGGRKGDPGLPGQPGTRGLDGPPGPDGLQGPPGPPGTS 1456 Score = 98.6 bits (244), Expect = 4e-20 Identities = 132/383 (34%), Positives = 156/383 (40%), Gaps = 73/383 (19%) Query: 755 PSRPSVARDGPTKMIFEGPNKLSPRIDGPP----TPASLRFDGSPGQMGGGGPLRFEGPQ 810 P P + GP GP K P I GPP TP + +G PG G F GP+ Sbjct: 701 PGIPGIGLPGPP-----GP-KGFPGIPGPPGAPGTPGRIGLEGPPGPPG------FPGPK 748 Query: 811 GQLGGGCPLRFEGPPGPVGTPLRFEGPIGQAGGGGFRFEGSPG----LRFEGSPGGLRFE 866 G+ G P GPPGP G P F+G +G G GF G PG +G PG Sbjct: 749 GEPGFALP----GPPGPPGLP-GFKGALGPKGDRGF--PGPPGPPGRTGLDGLPGPKGDV 801 Query: 867 GPGGQP----VGGLRFEGHRGQPVGGLRFEGPHGQP----VGGLRFD-NPRGQPVGGLRF 917 GP GQP GL G +G P G GP GQP + G + D P G V G Sbjct: 802 GPNGQPGPMGPPGLPGIGVQGPP-GPPGIPGPIGQPGLHGIPGEKGDPGPPGLDVPGPPG 860 Query: 918 EGGHGPSGAAIRFDGPHGQPG-----GGIRFEGPLLQQGVGMRFEGPHG-------QSVA 965 E G A GP G PG G F G + G+ M GP G V Sbjct: 861 ERGSPGIPGAPGPIGPPGSPGLPGKAGASGFPGTKGEMGM-MGPPGPPGPLGIPGRSGVP 919 Query: 966 GLR----FEGQHNQLG--GNLRFEGPHGQPGVGIRFEGPLVQQGGGMRFEG-PSVPGGGL 1018 GL+ +GQ G G +G G PG + L+ G G P +PG Sbjct: 920 GLKGDDGLQGQPGLPGPTGEKGSKGEPGLPGPPGPMDPNLLGSKGEKGEPGLPGIPG--- 976 Query: 1019 RIEGPLG-QGGPRFEGCHALRFDGQPGQPSLL-PRFD-GLHGQPG----PRFERTPGQ-- 1069 + GP G QG P G L GQPG P P+ + GL GQPG P + T G Sbjct: 977 -VSGPKGYQGLPGDPGQPGL--SGQPGLPGPPGPKGNPGLPGQPGLIGPPGLKGTIGDMG 1033 Query: 1070 -PGPQRFDGPPGQQVQPRFDGVP 1091 PGPQ +GPPG P G P Sbjct: 1034 FPGPQGVEGPPGPSGVPGQPGSP 1056 Score = 97.4 bits (241), Expect = 9e-20 Identities = 150/489 (30%), Positives = 180/489 (36%), Gaps = 103/489 (21%) Query: 711 FPLKRPRYEDSDKPFVDSPASRFAGLDTNQRLTALAEDRPLFDGPSRPSVARDGPTKMIF 770 FP +R + D P + P GLD P GP P+ P+ I Sbjct: 401 FPGERGQKGDEGPPGISIPGP--PGLDGQP-------GAPGLPGPPGPAGPHIPPSDEIC 451 Query: 771 EGPNKLSPRIDGPP-TPASLRFDGSPGQMGGGGPLRFE-------GPQGQLG-GGCPLRF 821 E P GPP +P G G G G F GP GQ G G P Sbjct: 452 E------PGPPGPPGSPGDKGLQGEQGVKGDKGDTCFNCIGTGISGPPGQPGLPGLP--- 502 Query: 822 EGPPGPVGTPLRFEGPIGQAGGGGFRFEGSPGLRFEGSPGGLRFEGPGGQPVGGLRFEGH 881 GPPG +G P + +G GQAG G + G PG+ G+PG F G G+P L F G Sbjct: 503 -GPPGSLGFPGQ-KGEKGQAGATGPK--GLPGI--PGAPGAPGFPGSKGEPGDILTFPGM 556 Query: 882 RGQPVGGLRFEGPHGQPV--------GGLRFDNPRGQPVGGLRFEGGHGPSGAAIRFDGP 933 +G G L G G P G P+G+P GG+ F+G GP G G Sbjct: 557 KGDK-GELGSPGAPGLPGLPGTPGQDGLPGLPGPKGEP-GGITFKGERGPPGNP----GL 610 Query: 934 HGQPGGGIRFEGPLLQQGVGMRFEGPHGQS-VAGLRFEGQHNQLGGNLRFEGPHGQPGVG 992 G PG GP+ G G GP G+ + G+ G Q G GP G PG Sbjct: 611 PGLPGN----IGPMGPPGFGP--PGPVGEKGIQGVA--GNPGQPG----IPGPKGDPGQT 658 Query: 993 IRFEGPLVQQGGGMRFEGPSVPGGGLRIEGPLGQGGPRFEGCHALRFDGQPGQPSLLPRF 1052 I G P +PG R +G +G G G PGQP L P Sbjct: 659 ITQPGK------------PGLPGNPGR-DGDVGLPGD----------PGLPGQPGL-PGI 694 Query: 1053 DGLHGQPGPRFERTPGQPGPQRFDGPPGQQVQPRFDGVPQR--FDGPQHQQASRFDIPLG 1110 G G+PG PG PGP+ F G PG P G P R +GP F P G Sbjct: 695 PGSKGEPGIPGIGLPGPPGPKGFPGIPG---PPGAPGTPGRIGLEGPPGPPG--FPGPKG 749 Query: 1111 LQGTRFDNHPSQRLESVSFNQTGPYND-----PPGNAFNAPSQGLQFQRHEQIFDSPQGP 1165 G P GP D PPG GL + + GP Sbjct: 750 EPGFALPGPPGPPGLPGFKGALGPKGDRGFPGPPGPPGRTGLDGLPGPKGD------VGP 803 Query: 1166 NFN-GPHGP 1173 N GP GP Sbjct: 804 NGQPGPMGP 812 Score = 94.0 bits (232), Expect = 1e-18 Identities = 123/379 (32%), Positives = 151/379 (39%), Gaps = 77/379 (20%) Query: 780 IDGPPTPASLRFDGSPGQMGGGGPLRFEGPQGQLGGGCPLRFEGPPGPVGTPLRFEGPIG 839 I GPP L G PG +GGGG GP G+ G +G PGP G +G G Sbjct: 1135 ISGPPGNPGL--PGEPGPVGGGGHPGQPGPPGEKGKPGQ---DGIPGPAGQ----KGEPG 1185 Query: 840 QAGGGGFRFEGSPGLRFE-------GSPGGLRFEGPGGQPVGGLRFEGHRGQPVGGLRFE 892 Q G G G PGL + G PG GP G+P G F G +G P Sbjct: 1186 QPGFGNPGPPGLPGLSGQKGDGGLPGIPGNPGLPGPKGEP-GFHGFPGVQGPP------- 1237 Query: 893 GPHGQPVGGLRFDNPRGQPVGGLRFEGGHGPSGAAIRFDGPHGQPG----GGIRFE-GPL 947 GP G P G + P+G P G GP G GP G PG GGI+ E G Sbjct: 1238 GPPGSP--GPALEGPKGNP-------GPQGPPGRP-GLPGPEGPPGLPGNGGIKGEKGNP 1287 Query: 948 LQQGV----GMRFE-GPHG-------QSVAGLRFEGQHNQLGGNLRFEGPHGQPG-VGIR 994 Q G+ G++ + GP G + G++ + + G +GP G PG G Sbjct: 1288 GQPGLPGLPGLKGDQGPPGLQGNPGRPGLNGMKGDPGLPGVPGFPGMKGPSGVPGSAGPE 1347 Query: 995 FEGPLVQQGGGMRFEGPSVPGGGLRIEGPLGQGG----------PRFEGCHALRFD-GQP 1043 E L+ G GPS G + I+G G G P +G L G P Sbjct: 1348 GEPGLIGPPGPPGLPGPS--GQSIIIKGDAGPPGIPGQPGLKGLPGPQGPQGLPGPTGPP 1405 Query: 1044 GQPSL--LPRFDGLHGQPGPRFERTPGQPGPQRFDGPPGQQ------VQPRFDGVPQRFD 1095 G P LP FDG G+ G PGQPG + DGPPG P V F Sbjct: 1406 GDPGRNGLPGFDGAGGRKGD--PGLPGQPGTRGLDGPPGPDGLQGPPGPPGTSSVAHGFL 1463 Query: 1096 GPQHQQASRFDIPLGLQGT 1114 +H Q + D P QGT Sbjct: 1464 ITRHSQTT--DAPQCPQGT 1480 Score = 92.4 bits (228), Expect = 3e-18 Identities = 131/406 (32%), Positives = 158/406 (38%), Gaps = 64/406 (15%) Query: 778 PRIDGPPTPASLRFDGSPGQMGGGGPLRFEGPQGQLGGGCPLRFEGPPGPVGTPLRFEGP 837 P G P + G PG G G GP G G + EGPPGP G F GP Sbjct: 695 PGSKGEPGIPGIGLPGPPGPKGFPG---IPGPPGAPGTPGRIGLEGPPGPPG----FPGP 747 Query: 838 IGQAGGGGFRFEGSPGL-RFEGS--PGGLR-FEGPGGQPVGGLRFEGHRGQPVGGLRFEG 893 G+ G G PGL F+G+ P G R F GP G P G +G G P G + G Sbjct: 748 KGEPGFALPGPPGPPGLPGFKGALGPKGDRGFPGPPGPP-GRTGLDGLPG-PKGDV---G 802 Query: 894 PHGQPVGGLRFDNPRGQP-VGGLRFEGGHGPSGAAIRFDGPHGQPGGGIRFEGPLLQQGV 952 P+GQP P G P + G+ +G GP G GP GQPG G ++G Sbjct: 803 PNGQP-------GPMGPPGLPGIGVQGPPGPPG----IPGPIGQPG----LHGIPGEKG- 846 Query: 953 GMRFEGPHGQSVAGLRFEGQHNQLGGNLRFEGPHGQPGV-GIRFEGPLVQQGGGMRFEGP 1011 GP G V G E + G GP G PG+ G G M GP Sbjct: 847 ---DPGPPGLDVPGPPGERGSPGIPGAPGPIGPPGSPGLPGKAGASGFPGTKGEMGMMGP 903 Query: 1012 SVPGGGLRIEGPLGQGGPRFEGCHALRFDGQPGQPSLLPRFDGLHGQPGPRFERTPGQPG 1071 P G L I G G P +G L+ GQPG P G G+PG PG PG Sbjct: 904 PGPPGPLGIPG--RSGVPGLKGDDGLQ--GQPGLPGPTGE-KGSKGEPG-----LPGPPG 953 Query: 1072 PQ--RFDGPPGQQVQPRFDGVPQRFDGPQHQQASRFDIPLGLQGTRFDNHPSQRLESVSF 1129 P G G++ +P G+P GP+ Q GL G P + Sbjct: 954 PMDPNLLGSKGEKGEPGLPGIP-GVSGPKGYQ--------GLPGD--PGQPGLSGQPGLP 1002 Query: 1130 NQTGPYNDP--PGNAFNAPSQGLQFQRHEQIFDSPQGPNFNGPHGP 1173 GP +P PG GL+ + F PQG GP GP Sbjct: 1003 GPPGPKGNPGLPGQPGLIGPPGLKGTIGDMGFPGPQG--VEGPPGP 1046 Score = 92.0 bits (227), Expect = 4e-18 Identities = 132/438 (30%), Positives = 167/438 (38%), Gaps = 91/438 (20%) Query: 792 DGSPGQMGGGGPLRFEGPQGQLGG-GCPLRFEGPPGPVGTPLRFEGPIGQAGGGGFRFEG 850 +G PG G GP GP+GQ G G P GPPGP G GP G G F G Sbjct: 56 EGHPGLPGFPGPEGPPGPRGQKGDDGIP----GPPGPKG----IRGPPGLPG-----FPG 102 Query: 851 SPGLRFEGSPGGLRFEGPGGQPVGGLRFEGHRGQP--VGGLRFEGPHGQP-VGGLR---- 903 +PGL G PG GP G P G +G RG P G +GP G P + G++ Sbjct: 103 TPGL--PGMPGHDGAPGPQGIP-GCNGTKGERGFPGSPGFPGLQGPPGPPGIPGMKGEPG 159 Query: 904 ------FDNPRGQP--VGGLRFEGGHGPSGAAIRFDGPHGQPG--------GGIRFEGPL 947 P+G P G +G GP+G GP G PG G GP Sbjct: 160 SIIMSSLPGPKGNPGYPGPPGIQGLPGPTG----IPGPIGPPGPPGLMGPPGPPGLPGP- 214 Query: 948 LQQGVGMRFEGPHGQSVAGLRFEGQHNQLGGNLRFEGPHGQPGVGIRFEGPL--VQQGGG 1005 + +G+ F+GP G+ G +GP G PG + P+ Q G Sbjct: 215 -KGNMGLNFQGPKGEK--------------GEQGLQGPPGPPGQISEQKRPIDVEFQKGD 259 Query: 1006 MRFEGPSVPGGGLRIEGPLG-QGGPRFEGCHALRFDGQPGQPSLLPRFDGLHGQPG-PRF 1063 G P G I GP G GG + E G+PG+ P DG +GQPG P Sbjct: 260 QGLPGDRGPPGPPGIRGPPGPPGGEKGEKGE----QGEPGKRG-KPGKDGENGQPGIPGL 314 Query: 1064 ERTPGQPGPQRFDGPPGQQVQPRFDG-----VPQRFDGPQHQQASRFDIPLGLQGTRFDN 1118 PG PG DG GQ+ G +P+ G + +P GL Sbjct: 315 PGDPGYPGEPGRDGEKGQKGDTGPPGPPGLVIPRPGTGITIGEKGNIGLP-GL------- 366 Query: 1119 HPSQRLESVSFNQTGP--YNDPPGNAFNAP--SQGLQFQRHEQIFDSPQGPNFNGPHG-- 1172 P ++ E GP PPG A P G +R ++ + P G + GP G Sbjct: 367 -PGEKGERGFPGIQGPPGLPGPPGAAVMGPPGPPGFPGERGQKGDEGPPGISIPGPPGLD 425 Query: 1173 --PGNQSFSNPLNRASGH 1188 PG P A H Sbjct: 426 GQPGAPGLPGPPGPAGPH 443 Score = 91.3 bits (225), Expect = 7e-18 Identities = 127/410 (30%), Positives = 158/410 (38%), Gaps = 94/410 (22%) Query: 777 SPRIDGPPTPASLRFDGSPGQMGGGGPLRFEGPQGQLGGGCPLRFEGPPGPVGTPLRFEG 836 +P + G P P G G G GP +G GQ +G PGP G +G Sbjct: 1141 NPGLPGEPGPV-----GGGGHPGQPGPPGEKGKPGQ---------DGIPGPAGQ----KG 1182 Query: 837 PIGQAGGGGFRFEGSPGLR-------FEGSPGGLRFEGPGGQPVGGLRFEGHRGQPVGGL 889 GQ G G G PGL G PG GP G+P G F G +G P Sbjct: 1183 EPGQPGFGNPGPPGLPGLSGQKGDGGLPGIPGNPGLPGPKGEP-GFHGFPGVQGPP---- 1237 Query: 890 RFEGPHGQPVGGLRFDNPRGQPVGGLRFEGGHGPSGAAIRFDGPHGQPG----GGIRFEG 945 GP G P G + P+G P G GP G GP G PG GGI+ E Sbjct: 1238 ---GPPGSP--GPALEGPKGNP-------GPQGPPGRP-GLPGPEGPPGLPGNGGIKGE- 1283 Query: 946 PLLQQGVGMRFEGPHGQ-SVAGL-RFEGQHNQLGGNLRFEGPHGQPGV-GIRFEGPLVQQ 1002 +G GQ + GL +G G +G G+PG+ G++ + L Sbjct: 1284 -----------KGNPGQPGLPGLPGLKGDQGPPG----LQGNPGRPGLNGMKGDPGLPGV 1328 Query: 1003 GGGMRFEGPS-VPG-----GGLRIEGPLGQGGPRFEGCHALRFDGQPGQPSLLPRFDGLH 1056 G +GPS VPG G + GP G G ++ G G P +P GL Sbjct: 1329 PGFPGMKGPSGVPGSAGPEGEPGLIGPPGPPGLPGPSGQSIIIKGDAGPPG-IPGQPGLK 1387 Query: 1057 GQPGPRFERTPGQPGPQRFDGPPGQQVQPRFDGVPQRFDGPQHQQASRFDIPLGLQGTR- 1115 G PGP + G PGP G PG+ P FDG R P +P G GTR Sbjct: 1388 GLPGP--QGPQGLPGPTGPPGDPGRNGLPGFDGAGGRKGDP--------GLP-GQPGTRG 1436 Query: 1116 FDNHPSQRLESVSFNQTGPYNDPPGNAFNAPSQGLQFQRHEQIFDSPQGP 1165 D P GP PPG ++ + G RH Q D+PQ P Sbjct: 1437 LDGPPGPD------GLQGP-PGPPGT--SSVAHGFLITRHSQTTDAPQCP 1477 Score = 87.8 bits (216), Expect = 7e-17 Identities = 134/414 (32%), Positives = 155/414 (37%), Gaps = 103/414 (24%) Query: 750 PLFDGPS-RPSVARDGPTKMIFEGP-------NKLSPRID----GPP-TPASLRFDGSPG 796 P F GP P A GP GP L P+ D GPP P DG PG Sbjct: 742 PGFPGPKGEPGFALPGPP-----GPPGLPGFKGALGPKGDRGFPGPPGPPGRTGLDGLPG 796 Query: 797 QMGGGGPLRFEGPQGQLGGGCP-LRFEGPPGPVGTPLRFEGPIGQAGGGGFRFE----GS 851 G GP GP G G P + +GPPGP G P GPIGQ G G E G Sbjct: 797 PKGDVGPNGQPGPMGP--PGLPGIGVQGPPGPPGIP----GPIGQPGLHGIPGEKGDPGP 850 Query: 852 PGLRFEGSPGGLRFEGPGGQP--------------VGGLRFEGHRGQ--------PVGGL 889 PGL G PG G G P G F G +G+ P G L Sbjct: 851 PGLDVPGPPGERGSPGIPGAPGPIGPPGSPGLPGKAGASGFPGTKGEMGMMGPPGPPGPL 910 Query: 890 RFEGPHGQPVGGLRFDNP-RGQP--------VGGLRFEGGHGPSGAA----IRFDGPHGQ 936 G G P GL+ D+ +GQP G G GP G + G G+ Sbjct: 911 GIPGRSGVP--GLKGDDGLQGQPGLPGPTGEKGSKGEPGLPGPPGPMDPNLLGSKGEKGE 968 Query: 937 PG--GGIRFEGPLLQQGVGMRFEGPHGQSVAGLRFEGQHNQLGGNLRFEGPHGQPGVGIR 994 PG G GP QG+ G GQ GL GQ G GP G PG+ + Sbjct: 969 PGLPGIPGVSGPKGYQGL----PGDPGQP--GL--SGQPGLPGP----PGPKGNPGLPGQ 1016 Query: 995 --FEGPLVQQG--GGMRFEGPSVPGGGLRIEGPLGQGG----PRFEGCHALRFD-GQPGQ 1045 GP +G G M F GP +EGP G G P G + D G PG Sbjct: 1017 PGLIGPPGLKGTIGDMGFPGPQ------GVEGPPGPSGVPGQPGSPGLPGQKGDKGDPGI 1070 Query: 1046 PSL-LPRFDGLHGQPG-------PRFERTPGQPGPQRFDGPPGQQVQPRFDGVP 1091 S+ LP G G+PG P + + G PG G PG + QP G P Sbjct: 1071 SSIGLPGLPGPKGEPGLPGYPGNPGIKGSVGDPGLPGLPGTPGAKGQPGLPGFP 1124 Score = 81.3 bits (199), Expect = 7e-15 Identities = 147/513 (28%), Positives = 182/513 (35%), Gaps = 112/513 (21%) Query: 750 PLFDGPSRPSVAR-----DG----PTKMIFEGPNKLSPRIDGPPTPASLRFDGSPGQMGG 800 P F GP P R DG P GP L P P DG+PG G Sbjct: 62 PGFPGPEGPPGPRGQKGDDGIPGPPGPKGIRGPPGLPGFPGTPGLPGMPGHDGAPGPQGI 121 Query: 801 GGPLRFEGPQGQLGGGCPLRFEGPPGPVGTP-----------LRFEGPIGQAGGGGFRFE 849 G +G +G G +GPPGP G P GP G G + Sbjct: 122 PGCNGTKGERGFPGSPGFPGLQGPPGPPGIPGMKGEPGSIIMSSLPGPKGNPG-----YP 176 Query: 850 GSPGLRFEGSPGGLRFEGPGGQPVGGLRFEGHRGQP-------VGGLRFEGPHGQPVGGL 902 G PG+ +G PG GP G P G G G P GL F+GP G+ G Sbjct: 177 GPPGI--QGLPGPTGIPGPIGPP-GPPGLMGPPGPPGLPGPKGNMGLNFQGPKGEK-GEQ 232 Query: 903 RFDNPRGQP---------------VGGLRFEGGHGPSG-AAIRFDGPHGQPGGGIRFEGP 946 P G P G G GP G IR GP G PGG +G Sbjct: 233 GLQGPPGPPGQISEQKRPIDVEFQKGDQGLPGDRGPPGPPGIR--GPPGPPGGEKGEKGE 290 Query: 947 LLQQGVGMR--FEGPHGQ-SVAGL----RFEGQHNQLG--GNLRFEGPHGQPGVGIRFEG 997 + G + +G +GQ + GL + G+ + G G GP G PG+ I G Sbjct: 291 QGEPGKRGKPGKDGENGQPGIPGLPGDPGYPGEPGRDGEKGQKGDTGPPGPPGLVIPRPG 350 Query: 998 PLVQQGGGMRFEGPSVPG-----GGLRIEGPLGQGGPRFEGCHALRFDGQPGQPS----- 1047 + G P +PG G I+GP G GP G + G PG P Sbjct: 351 TGITIGEKGNIGLPGLPGEKGERGFPGIQGPPGLPGP--PGAAVMGPPGPPGFPGERGQK 408 Query: 1048 --------LLPRFDGLHGQPGPRFERTPGQPGPQRFDGPPGQQVQPRFDGVPQRFDGPQH 1099 +P GL GQPG PG PGP GP G + P D + + GP Sbjct: 409 GDEGPPGISIPGPPGLDGQPG-----APGLPGP---PGPAGPHIPPS-DEICE--PGPPG 457 Query: 1100 QQASRFDIPL-GLQGTRFDNHPSQRLESVSFNQTGPYNDP--PGNAFNAPSQGLQFQRHE 1156 S D L G QG + D + + +GP P PG S G Q+ E Sbjct: 458 PPGSPGDKGLQGEQGVKGDKGDT-CFNCIGTGISGPPGQPGLPGLPGPPGSLGFPGQKGE 516 Query: 1157 Q-------------IFDSPQGPNFNGPHG-PGN 1175 + I +P P F G G PG+ Sbjct: 517 KGQAGATGPKGLPGIPGAPGAPGFPGSKGEPGD 549 Score = 33.9 bits (76), Expect = 1.3 Identities = 39/125 (31%), Positives = 47/125 (37%), Gaps = 23/125 (18%) Query: 1054 GLHGQPG----PRFERTPGQPGPQRFDGPPGQQVQPRFDGVPQRFDGPQHQQASRFDIPL 1109 G+ G+ G P E PG PG +GPPG + Q DG+P GP + R P Sbjct: 42 GIKGEKGERGFPGLEGHPGLPGFPGPEGPPGPRGQKGDDGIP----GPPGPKGIRG--PP 95 Query: 1110 GLQGTRFDNHPSQRLESVSFNQTGPYNDPPGNAFNAPSQGLQFQRHEQIF-DSPQGPNFN 1168 GL G F P GP P G + E+ F SP P Sbjct: 96 GLPG--FPGTPGLPGMPGHDGAPGPQGIP----------GCNGTKGERGFPGSPGFPGLQ 143 Query: 1169 GPHGP 1173 GP GP Sbjct: 144 GPPGP 148 Score = 33.5 bits (75), Expect = 1.6 Identities = 24/64 (37%), Positives = 29/64 (45%), Gaps = 5/64 (7%) Query: 771 EGPNKLSPRIDGPPTPASLR----FDGSPGQMGGGGPLRFEGPQGQLGGGCPLRFEGPPG 826 +GP L P GPP FDG+ G+ G G G +G G P +GPPG Sbjct: 1393 QGPQGL-PGPTGPPGDPGRNGLPGFDGAGGRKGDPGLPGQPGTRGLDGPPGPDGLQGPPG 1451 Query: 827 PVGT 830 P GT Sbjct: 1452 PPGT 1455 >gi|15890088 type IV collagen alpha 5 isoform 3 precursor [Homo sapiens] Length = 1688 Score = 104 bits (259), Expect = 8e-22 Identities = 149/477 (31%), Positives = 176/477 (36%), Gaps = 93/477 (19%) Query: 778 PRIDGPPTPASLRFDGSPGQMGGGGPLRFEGPQGQLGGGCPLRFEGPPGPVGTPLR---- 833 P + GPP P G PGQ G GP +G G +G P EGPPGP G P + Sbjct: 999 PGLPGPPGPKGN--PGLPGQPGLIGPPGLKGTIGDMGFPGPQGVEGPPGPSGVPGQPGSP 1056 Query: 834 -FEGPIGQAGGGGFRFEGSPGL-------RFEGSPGGLRFEGPGGQP-VGGL-RFEGHRG 883 G G G G G PGL G PG +G G P + GL G +G Sbjct: 1057 GLPGQKGDKGDPGISSIGLPGLPGPKGEPGLPGYPGNPGIKGSVGDPGLPGLPGTPGAKG 1116 Query: 884 QPVGGLRFEGPHGQPVGGLRFDNPRGQPVGGLRFEGGHGPSGAAIRFDGPHGQPG--GGI 941 QP G F G G P G P G P GL E G G GP G+ G G Sbjct: 1117 QP-GLPGFPGTPGPP-GPKGISGPPGNP--GLPGEPGPVGGGGHPGQPGPPGEKGKPGQD 1172 Query: 942 RFEGPLLQQG----VGMRFEGPHG-QSVAGLRFEGQHNQLGGNLRFEGPHGQPGV----- 991 GP Q+G G GP G ++G + +G + GN GP G+PG Sbjct: 1173 GIPGPAGQKGEPGQPGFGNPGPPGLPGLSGQKGDGGLPGIPGNPGLPGPKGEPGFHGFPG 1232 Query: 992 -----------GIRFEGPLVQQG-----GGMRFEG-------PSVPGGGLRIEGPLGQ-G 1027 G EGP G G F+G P +PG G I+G G G Sbjct: 1233 VQGPPGPPGSPGPALEGPKGNPGPQGPPGRPGFQGLPGPEGPPGLPGNG-GIKGEKGNPG 1291 Query: 1028 GPRFEGCHALRFD-------GQPGQPSLLPRFDGLHGQPG-PRFERTPGQPGPQRFDGPP 1079 P G L+ D G PG+P L +G+ G PG P PG GP G Sbjct: 1292 QPGLPGLPGLKGDQGPPGLQGNPGRPGL----NGMKGDPGLPGVPGFPGMKGPSGVPGSA 1347 Query: 1080 GQQVQPRFDGV--PQRFDGPQHQ------QASRFDIP--LGLQGTRFDNHPSQRLESVSF 1129 G + +P G P GP Q A IP GL+G P Q L Sbjct: 1348 GPEGEPGLIGPPGPPGLPGPSGQSIIIKGDAGPPGIPGQPGLKGLPGPQGP-QGLP---- 1402 Query: 1130 NQTGPYNDPPGNAF--------NAPSQGLQFQRHEQIFDSPQGPN-FNGPHGPGNQS 1177 TGP DP N GL Q + D P GP+ GP GP S Sbjct: 1403 GPTGPPGDPGRNGLPGFDGAGGRKGDPGLPGQPGTRGLDGPPGPDGLQGPPGPPGTS 1459 Score = 97.4 bits (241), Expect = 9e-20 Identities = 150/489 (30%), Positives = 180/489 (36%), Gaps = 103/489 (21%) Query: 711 FPLKRPRYEDSDKPFVDSPASRFAGLDTNQRLTALAEDRPLFDGPSRPSVARDGPTKMIF 770 FP +R + D P + P GLD P GP P+ P+ I Sbjct: 401 FPGERGQKGDEGPPGISIPGP--PGLDGQP-------GAPGLPGPPGPAGPHIPPSDEIC 451 Query: 771 EGPNKLSPRIDGPP-TPASLRFDGSPGQMGGGGPLRFE-------GPQGQLG-GGCPLRF 821 E P GPP +P G G G G F GP GQ G G P Sbjct: 452 E------PGPPGPPGSPGDKGLQGEQGVKGDKGDTCFNCIGTGISGPPGQPGLPGLP--- 502 Query: 822 EGPPGPVGTPLRFEGPIGQAGGGGFRFEGSPGLRFEGSPGGLRFEGPGGQPVGGLRFEGH 881 GPPG +G P + +G GQAG G + G PG+ G+PG F G G+P L F G Sbjct: 503 -GPPGSLGFPGQ-KGEKGQAGATGPK--GLPGI--PGAPGAPGFPGSKGEPGDILTFPGM 556 Query: 882 RGQPVGGLRFEGPHGQPV--------GGLRFDNPRGQPVGGLRFEGGHGPSGAAIRFDGP 933 +G G L G G P G P+G+P GG+ F+G GP G G Sbjct: 557 KGDK-GELGSPGAPGLPGLPGTPGQDGLPGLPGPKGEP-GGITFKGERGPPGNP----GL 610 Query: 934 HGQPGGGIRFEGPLLQQGVGMRFEGPHGQS-VAGLRFEGQHNQLGGNLRFEGPHGQPGVG 992 G PG GP+ G G GP G+ + G+ G Q G GP G PG Sbjct: 611 PGLPGN----IGPMGPPGFGP--PGPVGEKGIQGVA--GNPGQPG----IPGPKGDPGQT 658 Query: 993 IRFEGPLVQQGGGMRFEGPSVPGGGLRIEGPLGQGGPRFEGCHALRFDGQPGQPSLLPRF 1052 I G P +PG R +G +G G G PGQP L P Sbjct: 659 ITQPGK------------PGLPGNPGR-DGDVGLPGD----------PGLPGQPGL-PGI 694 Query: 1053 DGLHGQPGPRFERTPGQPGPQRFDGPPGQQVQPRFDGVPQR--FDGPQHQQASRFDIPLG 1110 G G+PG PG PGP+ F G PG P G P R +GP F P G Sbjct: 695 PGSKGEPGIPGIGLPGPPGPKGFPGIPG---PPGAPGTPGRIGLEGPPGPPG--FPGPKG 749 Query: 1111 LQGTRFDNHPSQRLESVSFNQTGPYND-----PPGNAFNAPSQGLQFQRHEQIFDSPQGP 1165 G P GP D PPG GL + + GP Sbjct: 750 EPGFALPGPPGPPGLPGFKGALGPKGDRGFPGPPGPPGRTGLDGLPGPKGD------VGP 803 Query: 1166 NFN-GPHGP 1173 N GP GP Sbjct: 804 NGQPGPMGP 812 Score = 94.4 bits (233), Expect = 8e-19 Identities = 125/380 (32%), Positives = 154/380 (40%), Gaps = 76/380 (20%) Query: 780 IDGPPTPASLRFDGSPGQMGGGGPLRFEGPQGQLGGGCPLRFEGPPGPVGTPLRFEGPIG 839 I GPP L G PG +GGGG GP G+ G +G PGP G +G G Sbjct: 1135 ISGPPGNPGL--PGEPGPVGGGGHPGQPGPPGEKGKPGQ---DGIPGPAGQ----KGEPG 1185 Query: 840 QAGGGGFRFEGSPGLRFE-------GSPGGLRFEGPGGQPVGGLRFEGHRGQP----VGG 888 Q G G G PGL + G PG GP G+P G F G +G P G Sbjct: 1186 QPGFGNPGPPGLPGLSGQKGDGGLPGIPGNPGLPGPKGEP-GFHGFPGVQGPPGPPGSPG 1244 Query: 889 LRFEGPHGQPVGGLRFDNPRGQPVGGLRFEGGHGPSGAAIRFDGPHGQPG-GGIRFE-GP 946 EGP G P P+G P G F+G GP +GP G PG GGI+ E G Sbjct: 1245 PALEGPKGNP-------GPQGPP-GRPGFQGLPGP-------EGPPGLPGNGGIKGEKGN 1289 Query: 947 LLQQGV----GMRFE-GPHG-------QSVAGLRFEGQHNQLGGNLRFEGPHGQPG-VGI 993 Q G+ G++ + GP G + G++ + + G +GP G PG G Sbjct: 1290 PGQPGLPGLPGLKGDQGPPGLQGNPGRPGLNGMKGDPGLPGVPGFPGMKGPSGVPGSAGP 1349 Query: 994 RFEGPLVQQGGGMRFEGPSVPGGGLRIEGPLGQGG----------PRFEGCHALRFD-GQ 1042 E L+ G GPS G + I+G G G P +G L G Sbjct: 1350 EGEPGLIGPPGPPGLPGPS--GQSIIIKGDAGPPGIPGQPGLKGLPGPQGPQGLPGPTGP 1407 Query: 1043 PGQPSL--LPRFDGLHGQPGPRFERTPGQPGPQRFDGPPGQQ------VQPRFDGVPQRF 1094 PG P LP FDG G+ G PGQPG + DGPPG P V F Sbjct: 1408 PGDPGRNGLPGFDGAGGRKGD--PGLPGQPGTRGLDGPPGPDGLQGPPGPPGTSSVAHGF 1465 Query: 1095 DGPQHQQASRFDIPLGLQGT 1114 +H Q + D P QGT Sbjct: 1466 LITRHSQTT--DAPQCPQGT 1483 Score = 92.8 bits (229), Expect = 2e-18 Identities = 130/406 (32%), Positives = 161/406 (39%), Gaps = 83/406 (20%) Query: 777 SPRIDGPPTPASLRFDGSPGQMGGGGPLRFEGPQGQLGGGCPLRFEGPPGPVG----TPL 832 +P + G P P G G G GP +G GQ G P +G PG G P Sbjct: 1141 NPGLPGEPGPV-----GGGGHPGQPGPPGEKGKPGQDGIPGPAGQKGEPGQPGFGNPGPP 1195 Query: 833 RFEGPIGQAGGGGF-RFEGSPGLRF-EGSPGGLRFEGPGGQPVGGLRFEGHRGQPVGGLR 890 G GQ G GG G+PGL +G PG F G G P G G P G Sbjct: 1196 GLPGLSGQKGDGGLPGIPGNPGLPGPKGEPGFHGFPGVQGPP-------GPPGSP--GPA 1246 Query: 891 FEGPHGQPVGGLRFDNPRGQPVGGLRFEGGHGPSGAAIRFDGPHGQPG-GGIRFEGPLLQ 949 EGP G P P+G P G F+G GP +GP G PG GGI+ E Sbjct: 1247 LEGPKGNP-------GPQGPP-GRPGFQGLPGP-------EGPPGLPGNGGIKGE----- 1286 Query: 950 QGVGMRFEGPHGQ-SVAGL-RFEGQHNQLGGNLRFEGPHGQPGV-GIRFEGPLVQQGGGM 1006 +G GQ + GL +G G +G G+PG+ G++ + L G Sbjct: 1287 -------KGNPGQPGLPGLPGLKGDQGPPG----LQGNPGRPGLNGMKGDPGLPGVPGFP 1335 Query: 1007 RFEGPS-VPG-----GGLRIEGPLGQGGPRFEGCHALRFDGQPGQPSLLPRFDGLHGQPG 1060 +GPS VPG G + GP G G ++ G G P +P GL G PG Sbjct: 1336 GMKGPSGVPGSAGPEGEPGLIGPPGPPGLPGPSGQSIIIKGDAGPPG-IPGQPGLKGLPG 1394 Query: 1061 PRFERTPGQPGPQRFDGPPGQQVQPRFDGVPQRFDGPQHQQASRFDIPLGLQGTR-FDNH 1119 P + G PGP G PG+ P FDG R P +P G GTR D Sbjct: 1395 P--QGPQGLPGPTGPPGDPGRNGLPGFDGAGGRKGDP--------GLP-GQPGTRGLDGP 1443 Query: 1120 PSQRLESVSFNQTGPYNDPPGNAFNAPSQGLQFQRHEQIFDSPQGP 1165 P GP PPG ++ + G RH Q D+PQ P Sbjct: 1444 PGPD------GLQGP-PGPPGT--SSVAHGFLITRHSQTTDAPQCP 1480 Score = 92.4 bits (228), Expect = 3e-18 Identities = 131/406 (32%), Positives = 158/406 (38%), Gaps = 64/406 (15%) Query: 778 PRIDGPPTPASLRFDGSPGQMGGGGPLRFEGPQGQLGGGCPLRFEGPPGPVGTPLRFEGP 837 P G P + G PG G G GP G G + EGPPGP G F GP Sbjct: 695 PGSKGEPGIPGIGLPGPPGPKGFPG---IPGPPGAPGTPGRIGLEGPPGPPG----FPGP 747 Query: 838 IGQAGGGGFRFEGSPGL-RFEGS--PGGLR-FEGPGGQPVGGLRFEGHRGQPVGGLRFEG 893 G+ G G PGL F+G+ P G R F GP G P G +G G P G + G Sbjct: 748 KGEPGFALPGPPGPPGLPGFKGALGPKGDRGFPGPPGPP-GRTGLDGLPG-PKGDV---G 802 Query: 894 PHGQPVGGLRFDNPRGQP-VGGLRFEGGHGPSGAAIRFDGPHGQPGGGIRFEGPLLQQGV 952 P+GQP P G P + G+ +G GP G GP GQPG G ++G Sbjct: 803 PNGQP-------GPMGPPGLPGIGVQGPPGPPG----IPGPIGQPG----LHGIPGEKG- 846 Query: 953 GMRFEGPHGQSVAGLRFEGQHNQLGGNLRFEGPHGQPGV-GIRFEGPLVQQGGGMRFEGP 1011 GP G V G E + G GP G PG+ G G M GP Sbjct: 847 ---DPGPPGLDVPGPPGERGSPGIPGAPGPIGPPGSPGLPGKAGASGFPGTKGEMGMMGP 903 Query: 1012 SVPGGGLRIEGPLGQGGPRFEGCHALRFDGQPGQPSLLPRFDGLHGQPGPRFERTPGQPG 1071 P G L I G G P +G L+ GQPG P G G+PG PG PG Sbjct: 904 PGPPGPLGIPG--RSGVPGLKGDDGLQ--GQPGLPGPTGE-KGSKGEPG-----LPGPPG 953 Query: 1072 PQ--RFDGPPGQQVQPRFDGVPQRFDGPQHQQASRFDIPLGLQGTRFDNHPSQRLESVSF 1129 P G G++ +P G+P GP+ Q GL G P + Sbjct: 954 PMDPNLLGSKGEKGEPGLPGIP-GVSGPKGYQ--------GLPGD--PGQPGLSGQPGLP 1002 Query: 1130 NQTGPYNDP--PGNAFNAPSQGLQFQRHEQIFDSPQGPNFNGPHGP 1173 GP +P PG GL+ + F PQG GP GP Sbjct: 1003 GPPGPKGNPGLPGQPGLIGPPGLKGTIGDMGFPGPQG--VEGPPGP 1046 Score = 92.0 bits (227), Expect = 4e-18 Identities = 132/438 (30%), Positives = 167/438 (38%), Gaps = 91/438 (20%) Query: 792 DGSPGQMGGGGPLRFEGPQGQLGG-GCPLRFEGPPGPVGTPLRFEGPIGQAGGGGFRFEG 850 +G PG G GP GP+GQ G G P GPPGP G GP G G F G Sbjct: 56 EGHPGLPGFPGPEGPPGPRGQKGDDGIP----GPPGPKG----IRGPPGLPG-----FPG 102 Query: 851 SPGLRFEGSPGGLRFEGPGGQPVGGLRFEGHRGQP--VGGLRFEGPHGQP-VGGLR---- 903 +PGL G PG GP G P G +G RG P G +GP G P + G++ Sbjct: 103 TPGL--PGMPGHDGAPGPQGIP-GCNGTKGERGFPGSPGFPGLQGPPGPPGIPGMKGEPG 159 Query: 904 ------FDNPRGQP--VGGLRFEGGHGPSGAAIRFDGPHGQPG--------GGIRFEGPL 947 P+G P G +G GP+G GP G PG G GP Sbjct: 160 SIIMSSLPGPKGNPGYPGPPGIQGLPGPTG----IPGPIGPPGPPGLMGPPGPPGLPGP- 214 Query: 948 LQQGVGMRFEGPHGQSVAGLRFEGQHNQLGGNLRFEGPHGQPGVGIRFEGPL--VQQGGG 1005 + +G+ F+GP G+ G +GP G PG + P+ Q G Sbjct: 215 -KGNMGLNFQGPKGEK--------------GEQGLQGPPGPPGQISEQKRPIDVEFQKGD 259 Query: 1006 MRFEGPSVPGGGLRIEGPLG-QGGPRFEGCHALRFDGQPGQPSLLPRFDGLHGQPG-PRF 1063 G P G I GP G GG + E G+PG+ P DG +GQPG P Sbjct: 260 QGLPGDRGPPGPPGIRGPPGPPGGEKGEKGE----QGEPGKRG-KPGKDGENGQPGIPGL 314 Query: 1064 ERTPGQPGPQRFDGPPGQQVQPRFDG-----VPQRFDGPQHQQASRFDIPLGLQGTRFDN 1118 PG PG DG GQ+ G +P+ G + +P GL Sbjct: 315 PGDPGYPGEPGRDGEKGQKGDTGPPGPPGLVIPRPGTGITIGEKGNIGLP-GL------- 366 Query: 1119 HPSQRLESVSFNQTGP--YNDPPGNAFNAP--SQGLQFQRHEQIFDSPQGPNFNGPHG-- 1172 P ++ E GP PPG A P G +R ++ + P G + GP G Sbjct: 367 -PGEKGERGFPGIQGPPGLPGPPGAAVMGPPGPPGFPGERGQKGDEGPPGISIPGPPGLD 425 Query: 1173 --PGNQSFSNPLNRASGH 1188 PG P A H Sbjct: 426 GQPGAPGLPGPPGPAGPH 443 Score = 81.3 bits (199), Expect = 7e-15 Identities = 147/513 (28%), Positives = 182/513 (35%), Gaps = 112/513 (21%) Query: 750 PLFDGPSRPSVAR-----DG----PTKMIFEGPNKLSPRIDGPPTPASLRFDGSPGQMGG 800 P F GP P R DG P GP L P P DG+PG G Sbjct: 62 PGFPGPEGPPGPRGQKGDDGIPGPPGPKGIRGPPGLPGFPGTPGLPGMPGHDGAPGPQGI 121 Query: 801 GGPLRFEGPQGQLGGGCPLRFEGPPGPVGTP-----------LRFEGPIGQAGGGGFRFE 849 G +G +G G +GPPGP G P GP G G + Sbjct: 122 PGCNGTKGERGFPGSPGFPGLQGPPGPPGIPGMKGEPGSIIMSSLPGPKGNPG-----YP 176 Query: 850 GSPGLRFEGSPGGLRFEGPGGQPVGGLRFEGHRGQP-------VGGLRFEGPHGQPVGGL 902 G PG+ +G PG GP G P G G G P GL F+GP G+ G Sbjct: 177 GPPGI--QGLPGPTGIPGPIGPP-GPPGLMGPPGPPGLPGPKGNMGLNFQGPKGEK-GEQ 232 Query: 903 RFDNPRGQP---------------VGGLRFEGGHGPSG-AAIRFDGPHGQPGGGIRFEGP 946 P G P G G GP G IR GP G PGG +G Sbjct: 233 GLQGPPGPPGQISEQKRPIDVEFQKGDQGLPGDRGPPGPPGIR--GPPGPPGGEKGEKGE 290 Query: 947 LLQQGVGMR--FEGPHGQ-SVAGL----RFEGQHNQLG--GNLRFEGPHGQPGVGIRFEG 997 + G + +G +GQ + GL + G+ + G G GP G PG+ I G Sbjct: 291 QGEPGKRGKPGKDGENGQPGIPGLPGDPGYPGEPGRDGEKGQKGDTGPPGPPGLVIPRPG 350 Query: 998 PLVQQGGGMRFEGPSVPG-----GGLRIEGPLGQGGPRFEGCHALRFDGQPGQPS----- 1047 + G P +PG G I+GP G GP G + G PG P Sbjct: 351 TGITIGEKGNIGLPGLPGEKGERGFPGIQGPPGLPGP--PGAAVMGPPGPPGFPGERGQK 408 Query: 1048 --------LLPRFDGLHGQPGPRFERTPGQPGPQRFDGPPGQQVQPRFDGVPQRFDGPQH 1099 +P GL GQPG PG PGP GP G + P D + + GP Sbjct: 409 GDEGPPGISIPGPPGLDGQPG-----APGLPGP---PGPAGPHIPPS-DEICE--PGPPG 457 Query: 1100 QQASRFDIPL-GLQGTRFDNHPSQRLESVSFNQTGPYNDP--PGNAFNAPSQGLQFQRHE 1156 S D L G QG + D + + +GP P PG S G Q+ E Sbjct: 458 PPGSPGDKGLQGEQGVKGDKGDT-CFNCIGTGISGPPGQPGLPGLPGPPGSLGFPGQKGE 516 Query: 1157 Q-------------IFDSPQGPNFNGPHG-PGN 1175 + I +P P F G G PG+ Sbjct: 517 KGQAGATGPKGLPGIPGAPGAPGFPGSKGEPGD 549 Score = 33.9 bits (76), Expect = 1.3 Identities = 39/125 (31%), Positives = 47/125 (37%), Gaps = 23/125 (18%) Query: 1054 GLHGQPG----PRFERTPGQPGPQRFDGPPGQQVQPRFDGVPQRFDGPQHQQASRFDIPL 1109 G+ G+ G P E PG PG +GPPG + Q DG+P GP + R P Sbjct: 42 GIKGEKGERGFPGLEGHPGLPGFPGPEGPPGPRGQKGDDGIP----GPPGPKGIRG--PP 95 Query: 1110 GLQGTRFDNHPSQRLESVSFNQTGPYNDPPGNAFNAPSQGLQFQRHEQIF-DSPQGPNFN 1168 GL G F P GP P G + E+ F SP P Sbjct: 96 GLPG--FPGTPGLPGMPGHDGAPGPQGIP----------GCNGTKGERGFPGSPGFPGLQ 143 Query: 1169 GPHGP 1173 GP GP Sbjct: 144 GPPGP 148 Score = 33.5 bits (75), Expect = 1.6 Identities = 24/64 (37%), Positives = 29/64 (45%), Gaps = 5/64 (7%) Query: 771 EGPNKLSPRIDGPPTPASLR----FDGSPGQMGGGGPLRFEGPQGQLGGGCPLRFEGPPG 826 +GP L P GPP FDG+ G+ G G G +G G P +GPPG Sbjct: 1396 QGPQGL-PGPTGPPGDPGRNGLPGFDGAGGRKGDPGLPGQPGTRGLDGPPGPDGLQGPPG 1454 Query: 827 PVGT 830 P GT Sbjct: 1455 PPGT 1458 >gi|15890086 type IV collagen alpha 5 isoform 2 precursor [Homo sapiens] Length = 1691 Score = 103 bits (257), Expect = 1e-21 Identities = 152/478 (31%), Positives = 176/478 (36%), Gaps = 92/478 (19%) Query: 778 PRIDGPPTPASLRFDGSPGQMGGGGPLRFEGPQGQLGGGCPLRFEGPPGPVGTPLR---- 833 P + GPP P G PGQ G GP +G G +G P EGPPGP G P + Sbjct: 999 PGLPGPPGPKGN--PGLPGQPGLIGPPGLKGTIGDMGFPGPQGVEGPPGPSGVPGQPGSP 1056 Query: 834 -FEGPIGQAGGGGFRFEGSPGL-------RFEGSPGGLRFEGPGGQP-VGGL-RFEGHRG 883 G G G G G PGL G PG +G G P + GL G +G Sbjct: 1057 GLPGQKGDKGDPGISSIGLPGLPGPKGEPGLPGYPGNPGIKGSVGDPGLPGLPGTPGAKG 1116 Query: 884 QPVGGLRFEGPHGQPVGGLRFDNPRGQPVGGLRFEGGHGPSGAAIRFDGPHGQPG--GGI 941 QP G F G G P G P G P GL E G G GP G+ G G Sbjct: 1117 QP-GLPGFPGTPGPP-GPKGISGPPGNP--GLPGEPGPVGGGGHPGQPGPPGEKGKPGQD 1172 Query: 942 RFEGPLLQQG----VGMRFEGPHG-QSVAGLRFEGQHNQLGGNLRFEGPHGQPGV----G 992 GP Q+G G GP G ++G + +G + GN GP G+PG G Sbjct: 1173 GIPGPAGQKGEPGQPGFGNPGPPGLPGLSGQKGDGGLPGIPGNPGLPGPKGEPGFHGFPG 1232 Query: 993 IRFEGPLVQQGG-GMRFEGPS---VPGGGLRIEGPLG-QGGPRFEGCHALRFD------- 1040 + +GP G G EGP P G GP G QG P EG L + Sbjct: 1233 V--QGPPGPPGSPGPALEGPKGNPGPQGPPGRPGPTGFQGLPGPEGPPGLPGNGGIKGEK 1290 Query: 1041 GQPGQPSLLPRFDGLHGQPG-PRFERTPGQPGPQRFDGPPGQQVQPRFDGV--------- 1090 G PGQP LP GL G G P + PG+PG G PG P F G+ Sbjct: 1291 GNPGQPG-LPGLPGLKGDQGPPGLQGNPGRPGLNGMKGDPGLPGVPGFPGMKGPSGVPGS 1349 Query: 1091 --------------PQRFDGPQHQ------QASRFDIP--LGLQGTRFDNHPSQRLESVS 1128 P GP Q A IP GL+G P Q L Sbjct: 1350 AGPEGEPGLIGPPGPPGLPGPSGQSIIIKGDAGPPGIPGQPGLKGLPGPQGP-QGLP--- 1405 Query: 1129 FNQTGPYNDPPGNAF--------NAPSQGLQFQRHEQIFDSPQGPN-FNGPHGPGNQS 1177 TGP DP N GL Q + D P GP+ GP GP S Sbjct: 1406 -GPTGPPGDPGRNGLPGFDGAGGRKGDPGLPGQPGTRGLDGPPGPDGLQGPPGPPGTS 1462 Score = 98.6 bits (244), Expect = 4e-20 Identities = 132/383 (34%), Positives = 156/383 (40%), Gaps = 73/383 (19%) Query: 755 PSRPSVARDGPTKMIFEGPNKLSPRIDGPP----TPASLRFDGSPGQMGGGGPLRFEGPQ 810 P P + GP GP K P I GPP TP + +G PG G F GP+ Sbjct: 701 PGIPGIGLPGPP-----GP-KGFPGIPGPPGAPGTPGRIGLEGPPGPPG------FPGPK 748 Query: 811 GQLGGGCPLRFEGPPGPVGTPLRFEGPIGQAGGGGFRFEGSPG----LRFEGSPGGLRFE 866 G+ G P GPPGP G P F+G +G G GF G PG +G PG Sbjct: 749 GEPGFALP----GPPGPPGLP-GFKGALGPKGDRGF--PGPPGPPGRTGLDGLPGPKGDV 801 Query: 867 GPGGQP----VGGLRFEGHRGQPVGGLRFEGPHGQP----VGGLRFD-NPRGQPVGGLRF 917 GP GQP GL G +G P G GP GQP + G + D P G V G Sbjct: 802 GPNGQPGPMGPPGLPGIGVQGPP-GPPGIPGPIGQPGLHGIPGEKGDPGPPGLDVPGPPG 860 Query: 918 EGGHGPSGAAIRFDGPHGQPG-----GGIRFEGPLLQQGVGMRFEGPHG-------QSVA 965 E G A GP G PG G F G + G+ M GP G V Sbjct: 861 ERGSPGIPGAPGPIGPPGSPGLPGKAGASGFPGTKGEMGM-MGPPGPPGPLGIPGRSGVP 919 Query: 966 GLR----FEGQHNQLG--GNLRFEGPHGQPGVGIRFEGPLVQQGGGMRFEG-PSVPGGGL 1018 GL+ +GQ G G +G G PG + L+ G G P +PG Sbjct: 920 GLKGDDGLQGQPGLPGPTGEKGSKGEPGLPGPPGPMDPNLLGSKGEKGEPGLPGIPG--- 976 Query: 1019 RIEGPLG-QGGPRFEGCHALRFDGQPGQPSLL-PRFD-GLHGQPG----PRFERTPGQ-- 1069 + GP G QG P G L GQPG P P+ + GL GQPG P + T G Sbjct: 977 -VSGPKGYQGLPGDPGQPGL--SGQPGLPGPPGPKGNPGLPGQPGLIGPPGLKGTIGDMG 1033 Query: 1070 -PGPQRFDGPPGQQVQPRFDGVP 1091 PGPQ +GPPG P G P Sbjct: 1034 FPGPQGVEGPPGPSGVPGQPGSP 1056 Score = 97.4 bits (241), Expect = 9e-20 Identities = 150/489 (30%), Positives = 180/489 (36%), Gaps = 103/489 (21%) Query: 711 FPLKRPRYEDSDKPFVDSPASRFAGLDTNQRLTALAEDRPLFDGPSRPSVARDGPTKMIF 770 FP +R + D P + P GLD P GP P+ P+ I Sbjct: 401 FPGERGQKGDEGPPGISIPGP--PGLDGQP-------GAPGLPGPPGPAGPHIPPSDEIC 451 Query: 771 EGPNKLSPRIDGPP-TPASLRFDGSPGQMGGGGPLRFE-------GPQGQLG-GGCPLRF 821 E P GPP +P G G G G F GP GQ G G P Sbjct: 452 E------PGPPGPPGSPGDKGLQGEQGVKGDKGDTCFNCIGTGISGPPGQPGLPGLP--- 502 Query: 822 EGPPGPVGTPLRFEGPIGQAGGGGFRFEGSPGLRFEGSPGGLRFEGPGGQPVGGLRFEGH 881 GPPG +G P + +G GQAG G + G PG+ G+PG F G G+P L F G Sbjct: 503 -GPPGSLGFPGQ-KGEKGQAGATGPK--GLPGI--PGAPGAPGFPGSKGEPGDILTFPGM 556 Query: 882 RGQPVGGLRFEGPHGQPV--------GGLRFDNPRGQPVGGLRFEGGHGPSGAAIRFDGP 933 +G G L G G P G P+G+P GG+ F+G GP G G Sbjct: 557 KGDK-GELGSPGAPGLPGLPGTPGQDGLPGLPGPKGEP-GGITFKGERGPPGNP----GL 610 Query: 934 HGQPGGGIRFEGPLLQQGVGMRFEGPHGQS-VAGLRFEGQHNQLGGNLRFEGPHGQPGVG 992 G PG GP+ G G GP G+ + G+ G Q G GP G PG Sbjct: 611 PGLPGN----IGPMGPPGFGP--PGPVGEKGIQGVA--GNPGQPG----IPGPKGDPGQT 658 Query: 993 IRFEGPLVQQGGGMRFEGPSVPGGGLRIEGPLGQGGPRFEGCHALRFDGQPGQPSLLPRF 1052 I G P +PG R +G +G G G PGQP L P Sbjct: 659 ITQPGK------------PGLPGNPGR-DGDVGLPGD----------PGLPGQPGL-PGI 694 Query: 1053 DGLHGQPGPRFERTPGQPGPQRFDGPPGQQVQPRFDGVPQR--FDGPQHQQASRFDIPLG 1110 G G+PG PG PGP+ F G PG P G P R +GP F P G Sbjct: 695 PGSKGEPGIPGIGLPGPPGPKGFPGIPG---PPGAPGTPGRIGLEGPPGPPG--FPGPKG 749 Query: 1111 LQGTRFDNHPSQRLESVSFNQTGPYND-----PPGNAFNAPSQGLQFQRHEQIFDSPQGP 1165 G P GP D PPG GL + + GP Sbjct: 750 EPGFALPGPPGPPGLPGFKGALGPKGDRGFPGPPGPPGRTGLDGLPGPKGD------VGP 803 Query: 1166 NFN-GPHGP 1173 N GP GP Sbjct: 804 NGQPGPMGP 812 Score = 94.0 bits (232), Expect = 1e-18 Identities = 124/379 (32%), Positives = 153/379 (40%), Gaps = 71/379 (18%) Query: 780 IDGPPTPASLRFDGSPGQMGGGGPLRFEGPQGQLGGGCPLRFEGPPGPVGTPLRFEGPIG 839 I GPP L G PG +GGGG GP G+ G +G PGP G +G G Sbjct: 1135 ISGPPGNPGL--PGEPGPVGGGGHPGQPGPPGEKGKPGQ---DGIPGPAGQ----KGEPG 1185 Query: 840 QAGGGGFRFEGSPGLRFE-------GSPGGLRFEGPGGQPVGGLRFEGHRGQPVGGLRFE 892 Q G G G PGL + G PG GP G+P G F G +G P Sbjct: 1186 QPGFGNPGPPGLPGLSGQKGDGGLPGIPGNPGLPGPKGEP-GFHGFPGVQGPP------- 1237 Query: 893 GPHGQPVGGLRFDNPRGQPVGGLRFEGGHGPSGAAIRFDGPHGQPG----GGIRFE-GPL 947 GP G P G + P+G P G G GP+G GP G PG GGI+ E G Sbjct: 1238 GPPGSP--GPALEGPKGNP-GPQGPPGRPGPTGFQ-GLPGPEGPPGLPGNGGIKGEKGNP 1293 Query: 948 LQQGV----GMRFE-GPHG-------QSVAGLRFEGQHNQLGGNLRFEGPHGQPG-VGIR 994 Q G+ G++ + GP G + G++ + + G +GP G PG G Sbjct: 1294 GQPGLPGLPGLKGDQGPPGLQGNPGRPGLNGMKGDPGLPGVPGFPGMKGPSGVPGSAGPE 1353 Query: 995 FEGPLVQQGGGMRFEGPSVPGGGLRIEGPLGQGG----------PRFEGCHALRFD-GQP 1043 E L+ G GPS G + I+G G G P +G L G P Sbjct: 1354 GEPGLIGPPGPPGLPGPS--GQSIIIKGDAGPPGIPGQPGLKGLPGPQGPQGLPGPTGPP 1411 Query: 1044 GQPSL--LPRFDGLHGQPGPRFERTPGQPGPQRFDGPPGQQ------VQPRFDGVPQRFD 1095 G P LP FDG G+ G PGQPG + DGPPG P V F Sbjct: 1412 GDPGRNGLPGFDGAGGRKGD--PGLPGQPGTRGLDGPPGPDGLQGPPGPPGTSSVAHGFL 1469 Query: 1096 GPQHQQASRFDIPLGLQGT 1114 +H Q + D P QGT Sbjct: 1470 ITRHSQTT--DAPQCPQGT 1486 Score = 92.4 bits (228), Expect = 3e-18 Identities = 131/406 (32%), Positives = 158/406 (38%), Gaps = 64/406 (15%) Query: 778 PRIDGPPTPASLRFDGSPGQMGGGGPLRFEGPQGQLGGGCPLRFEGPPGPVGTPLRFEGP 837 P G P + G PG G G GP G G + EGPPGP G F GP Sbjct: 695 PGSKGEPGIPGIGLPGPPGPKGFPG---IPGPPGAPGTPGRIGLEGPPGPPG----FPGP 747 Query: 838 IGQAGGGGFRFEGSPGL-RFEGS--PGGLR-FEGPGGQPVGGLRFEGHRGQPVGGLRFEG 893 G+ G G PGL F+G+ P G R F GP G P G +G G P G + G Sbjct: 748 KGEPGFALPGPPGPPGLPGFKGALGPKGDRGFPGPPGPP-GRTGLDGLPG-PKGDV---G 802 Query: 894 PHGQPVGGLRFDNPRGQP-VGGLRFEGGHGPSGAAIRFDGPHGQPGGGIRFEGPLLQQGV 952 P+GQP P G P + G+ +G GP G GP GQPG G ++G Sbjct: 803 PNGQP-------GPMGPPGLPGIGVQGPPGPPG----IPGPIGQPG----LHGIPGEKG- 846 Query: 953 GMRFEGPHGQSVAGLRFEGQHNQLGGNLRFEGPHGQPGV-GIRFEGPLVQQGGGMRFEGP 1011 GP G V G E + G GP G PG+ G G M GP Sbjct: 847 ---DPGPPGLDVPGPPGERGSPGIPGAPGPIGPPGSPGLPGKAGASGFPGTKGEMGMMGP 903 Query: 1012 SVPGGGLRIEGPLGQGGPRFEGCHALRFDGQPGQPSLLPRFDGLHGQPGPRFERTPGQPG 1071 P G L I G G P +G L+ GQPG P G G+PG PG PG Sbjct: 904 PGPPGPLGIPG--RSGVPGLKGDDGLQ--GQPGLPGPTGE-KGSKGEPG-----LPGPPG 953 Query: 1072 PQ--RFDGPPGQQVQPRFDGVPQRFDGPQHQQASRFDIPLGLQGTRFDNHPSQRLESVSF 1129 P G G++ +P G+P GP+ Q GL G P + Sbjct: 954 PMDPNLLGSKGEKGEPGLPGIP-GVSGPKGYQ--------GLPGD--PGQPGLSGQPGLP 1002 Query: 1130 NQTGPYNDP--PGNAFNAPSQGLQFQRHEQIFDSPQGPNFNGPHGP 1173 GP +P PG GL+ + F PQG GP GP Sbjct: 1003 GPPGPKGNPGLPGQPGLIGPPGLKGTIGDMGFPGPQG--VEGPPGP 1046 Score = 92.4 bits (228), Expect = 3e-18 Identities = 130/408 (31%), Positives = 161/408 (39%), Gaps = 84/408 (20%) Query: 777 SPRIDGPPTPASLRFDGSPGQMGGGGPLRFEGPQGQLGGGCPLRFEGPPGPVG----TPL 832 +P + G P P G G G GP +G GQ G P +G PG G P Sbjct: 1141 NPGLPGEPGPV-----GGGGHPGQPGPPGEKGKPGQDGIPGPAGQKGEPGQPGFGNPGPP 1195 Query: 833 RFEGPIGQAGGGGF-RFEGSPGLRF-EGSPGGLRFEGPGGQPVGGLRFEGHRGQPVGGLR 890 G GQ G GG G+PGL +G PG F G G P G G P G Sbjct: 1196 GLPGLSGQKGDGGLPGIPGNPGLPGPKGEPGFHGFPGVQGPP-------GPPGSP--GPA 1246 Query: 891 FEGPHGQPVGGLRFDNPRGQP--VGGLRFEGGHGPSGAAIRFDGPHGQPG-GGIRFEGPL 947 EGP G P P+G P G F+G GP +GP G PG GGI+ E Sbjct: 1247 LEGPKGNP-------GPQGPPGRPGPTGFQGLPGP-------EGPPGLPGNGGIKGE--- 1289 Query: 948 LQQGVGMRFEGPHGQ-SVAGL-RFEGQHNQLGGNLRFEGPHGQPGV-GIRFEGPLVQQGG 1004 +G GQ + GL +G G +G G+PG+ G++ + L G Sbjct: 1290 ---------KGNPGQPGLPGLPGLKGDQGPPG----LQGNPGRPGLNGMKGDPGLPGVPG 1336 Query: 1005 GMRFEGPS-VPG-----GGLRIEGPLGQGGPRFEGCHALRFDGQPGQPSLLPRFDGLHGQ 1058 +GPS VPG G + GP G G ++ G G P +P GL G Sbjct: 1337 FPGMKGPSGVPGSAGPEGEPGLIGPPGPPGLPGPSGQSIIIKGDAGPPG-IPGQPGLKGL 1395 Query: 1059 PGPRFERTPGQPGPQRFDGPPGQQVQPRFDGVPQRFDGPQHQQASRFDIPLGLQGTR-FD 1117 PGP + G PGP G PG+ P FDG R P +P G GTR D Sbjct: 1396 PGP--QGPQGLPGPTGPPGDPGRNGLPGFDGAGGRKGDP--------GLP-GQPGTRGLD 1444 Query: 1118 NHPSQRLESVSFNQTGPYNDPPGNAFNAPSQGLQFQRHEQIFDSPQGP 1165 P GP PPG ++ + G RH Q D+PQ P Sbjct: 1445 GPPGPD------GLQGP-PGPPGT--SSVAHGFLITRHSQTTDAPQCP 1483 Score = 92.0 bits (227), Expect = 4e-18 Identities = 132/438 (30%), Positives = 167/438 (38%), Gaps = 91/438 (20%) Query: 792 DGSPGQMGGGGPLRFEGPQGQLGG-GCPLRFEGPPGPVGTPLRFEGPIGQAGGGGFRFEG 850 +G PG G GP GP+GQ G G P GPPGP G GP G G F G Sbjct: 56 EGHPGLPGFPGPEGPPGPRGQKGDDGIP----GPPGPKG----IRGPPGLPG-----FPG 102 Query: 851 SPGLRFEGSPGGLRFEGPGGQPVGGLRFEGHRGQP--VGGLRFEGPHGQP-VGGLR---- 903 +PGL G PG GP G P G +G RG P G +GP G P + G++ Sbjct: 103 TPGL--PGMPGHDGAPGPQGIP-GCNGTKGERGFPGSPGFPGLQGPPGPPGIPGMKGEPG 159 Query: 904 ------FDNPRGQP--VGGLRFEGGHGPSGAAIRFDGPHGQPG--------GGIRFEGPL 947 P+G P G +G GP+G GP G PG G GP Sbjct: 160 SIIMSSLPGPKGNPGYPGPPGIQGLPGPTG----IPGPIGPPGPPGLMGPPGPPGLPGP- 214 Query: 948 LQQGVGMRFEGPHGQSVAGLRFEGQHNQLGGNLRFEGPHGQPGVGIRFEGPL--VQQGGG 1005 + +G+ F+GP G+ G +GP G PG + P+ Q G Sbjct: 215 -KGNMGLNFQGPKGEK--------------GEQGLQGPPGPPGQISEQKRPIDVEFQKGD 259 Query: 1006 MRFEGPSVPGGGLRIEGPLG-QGGPRFEGCHALRFDGQPGQPSLLPRFDGLHGQPG-PRF 1063 G P G I GP G GG + E G+PG+ P DG +GQPG P Sbjct: 260 QGLPGDRGPPGPPGIRGPPGPPGGEKGEKGE----QGEPGKRG-KPGKDGENGQPGIPGL 314 Query: 1064 ERTPGQPGPQRFDGPPGQQVQPRFDG-----VPQRFDGPQHQQASRFDIPLGLQGTRFDN 1118 PG PG DG GQ+ G +P+ G + +P GL Sbjct: 315 PGDPGYPGEPGRDGEKGQKGDTGPPGPPGLVIPRPGTGITIGEKGNIGLP-GL------- 366 Query: 1119 HPSQRLESVSFNQTGP--YNDPPGNAFNAP--SQGLQFQRHEQIFDSPQGPNFNGPHG-- 1172 P ++ E GP PPG A P G +R ++ + P G + GP G Sbjct: 367 -PGEKGERGFPGIQGPPGLPGPPGAAVMGPPGPPGFPGERGQKGDEGPPGISIPGPPGLD 425 Query: 1173 --PGNQSFSNPLNRASGH 1188 PG P A H Sbjct: 426 GQPGAPGLPGPPGPAGPH 443 Score = 87.8 bits (216), Expect = 7e-17 Identities = 134/414 (32%), Positives = 155/414 (37%), Gaps = 103/414 (24%) Query: 750 PLFDGPS-RPSVARDGPTKMIFEGP-------NKLSPRID----GPP-TPASLRFDGSPG 796 P F GP P A GP GP L P+ D GPP P DG PG Sbjct: 742 PGFPGPKGEPGFALPGPP-----GPPGLPGFKGALGPKGDRGFPGPPGPPGRTGLDGLPG 796 Query: 797 QMGGGGPLRFEGPQGQLGGGCP-LRFEGPPGPVGTPLRFEGPIGQAGGGGFRFE----GS 851 G GP GP G G P + +GPPGP G P GPIGQ G G E G Sbjct: 797 PKGDVGPNGQPGPMGP--PGLPGIGVQGPPGPPGIP----GPIGQPGLHGIPGEKGDPGP 850 Query: 852 PGLRFEGSPGGLRFEGPGGQP--------------VGGLRFEGHRGQ--------PVGGL 889 PGL G PG G G P G F G +G+ P G L Sbjct: 851 PGLDVPGPPGERGSPGIPGAPGPIGPPGSPGLPGKAGASGFPGTKGEMGMMGPPGPPGPL 910 Query: 890 RFEGPHGQPVGGLRFDNP-RGQP--------VGGLRFEGGHGPSGAA----IRFDGPHGQ 936 G G P GL+ D+ +GQP G G GP G + G G+ Sbjct: 911 GIPGRSGVP--GLKGDDGLQGQPGLPGPTGEKGSKGEPGLPGPPGPMDPNLLGSKGEKGE 968 Query: 937 PG--GGIRFEGPLLQQGVGMRFEGPHGQSVAGLRFEGQHNQLGGNLRFEGPHGQPGVGIR 994 PG G GP QG+ G GQ GL GQ G GP G PG+ + Sbjct: 969 PGLPGIPGVSGPKGYQGL----PGDPGQP--GL--SGQPGLPGP----PGPKGNPGLPGQ 1016 Query: 995 --FEGPLVQQG--GGMRFEGPSVPGGGLRIEGPLGQGG----PRFEGCHALRFD-GQPGQ 1045 GP +G G M F GP +EGP G G P G + D G PG Sbjct: 1017 PGLIGPPGLKGTIGDMGFPGPQ------GVEGPPGPSGVPGQPGSPGLPGQKGDKGDPGI 1070 Query: 1046 PSL-LPRFDGLHGQPG-------PRFERTPGQPGPQRFDGPPGQQVQPRFDGVP 1091 S+ LP G G+PG P + + G PG G PG + QP G P Sbjct: 1071 SSIGLPGLPGPKGEPGLPGYPGNPGIKGSVGDPGLPGLPGTPGAKGQPGLPGFP 1124 Score = 81.3 bits (199), Expect = 7e-15 Identities = 147/513 (28%), Positives = 182/513 (35%), Gaps = 112/513 (21%) Query: 750 PLFDGPSRPSVAR-----DG----PTKMIFEGPNKLSPRIDGPPTPASLRFDGSPGQMGG 800 P F GP P R DG P GP L P P DG+PG G Sbjct: 62 PGFPGPEGPPGPRGQKGDDGIPGPPGPKGIRGPPGLPGFPGTPGLPGMPGHDGAPGPQGI 121 Query: 801 GGPLRFEGPQGQLGGGCPLRFEGPPGPVGTP-----------LRFEGPIGQAGGGGFRFE 849 G +G +G G +GPPGP G P GP G G + Sbjct: 122 PGCNGTKGERGFPGSPGFPGLQGPPGPPGIPGMKGEPGSIIMSSLPGPKGNPG-----YP 176 Query: 850 GSPGLRFEGSPGGLRFEGPGGQPVGGLRFEGHRGQP-------VGGLRFEGPHGQPVGGL 902 G PG+ +G PG GP G P G G G P GL F+GP G+ G Sbjct: 177 GPPGI--QGLPGPTGIPGPIGPP-GPPGLMGPPGPPGLPGPKGNMGLNFQGPKGEK-GEQ 232 Query: 903 RFDNPRGQP---------------VGGLRFEGGHGPSG-AAIRFDGPHGQPGGGIRFEGP 946 P G P G G GP G IR GP G PGG +G Sbjct: 233 GLQGPPGPPGQISEQKRPIDVEFQKGDQGLPGDRGPPGPPGIR--GPPGPPGGEKGEKGE 290 Query: 947 LLQQGVGMR--FEGPHGQ-SVAGL----RFEGQHNQLG--GNLRFEGPHGQPGVGIRFEG 997 + G + +G +GQ + GL + G+ + G G GP G PG+ I G Sbjct: 291 QGEPGKRGKPGKDGENGQPGIPGLPGDPGYPGEPGRDGEKGQKGDTGPPGPPGLVIPRPG 350 Query: 998 PLVQQGGGMRFEGPSVPG-----GGLRIEGPLGQGGPRFEGCHALRFDGQPGQPS----- 1047 + G P +PG G I+GP G GP G + G PG P Sbjct: 351 TGITIGEKGNIGLPGLPGEKGERGFPGIQGPPGLPGP--PGAAVMGPPGPPGFPGERGQK 408 Query: 1048 --------LLPRFDGLHGQPGPRFERTPGQPGPQRFDGPPGQQVQPRFDGVPQRFDGPQH 1099 +P GL GQPG PG PGP GP G + P D + + GP Sbjct: 409 GDEGPPGISIPGPPGLDGQPG-----APGLPGP---PGPAGPHIPPS-DEICE--PGPPG 457 Query: 1100 QQASRFDIPL-GLQGTRFDNHPSQRLESVSFNQTGPYNDP--PGNAFNAPSQGLQFQRHE 1156 S D L G QG + D + + +GP P PG S G Q+ E Sbjct: 458 PPGSPGDKGLQGEQGVKGDKGDT-CFNCIGTGISGPPGQPGLPGLPGPPGSLGFPGQKGE 516 Query: 1157 Q-------------IFDSPQGPNFNGPHG-PGN 1175 + I +P P F G G PG+ Sbjct: 517 KGQAGATGPKGLPGIPGAPGAPGFPGSKGEPGD 549 Score = 33.9 bits (76), Expect = 1.3 Identities = 39/125 (31%), Positives = 47/125 (37%), Gaps = 23/125 (18%) Query: 1054 GLHGQPG----PRFERTPGQPGPQRFDGPPGQQVQPRFDGVPQRFDGPQHQQASRFDIPL 1109 G+ G+ G P E PG PG +GPPG + Q DG+P GP + R P Sbjct: 42 GIKGEKGERGFPGLEGHPGLPGFPGPEGPPGPRGQKGDDGIP----GPPGPKGIRG--PP 95 Query: 1110 GLQGTRFDNHPSQRLESVSFNQTGPYNDPPGNAFNAPSQGLQFQRHEQIF-DSPQGPNFN 1168 GL G F P GP P G + E+ F SP P Sbjct: 96 GLPG--FPGTPGLPGMPGHDGAPGPQGIP----------GCNGTKGERGFPGSPGFPGLQ 143 Query: 1169 GPHGP 1173 GP GP Sbjct: 144 GPPGP 148 Score = 33.5 bits (75), Expect = 1.6 Identities = 24/64 (37%), Positives = 29/64 (45%), Gaps = 5/64 (7%) Query: 771 EGPNKLSPRIDGPPTPASLR----FDGSPGQMGGGGPLRFEGPQGQLGGGCPLRFEGPPG 826 +GP L P GPP FDG+ G+ G G G +G G P +GPPG Sbjct: 1399 QGPQGL-PGPTGPPGDPGRNGLPGFDGAGGRKGDPGLPGQPGTRGLDGPPGPDGLQGPPG 1457 Query: 827 PVGT 830 P GT Sbjct: 1458 PPGT 1461 >gi|154759255 collagen, type XXVIII precursor [Homo sapiens] Length = 1125 Score = 102 bits (254), Expect = 3e-21 Identities = 146/456 (32%), Positives = 181/456 (39%), Gaps = 105/456 (23%) Query: 780 IDGPP-TPASLRFDGSPGQMGGGGPLRFE-----GPQGQLGGGCPLRFEGPPGPVGTPLR 833 I GPP P F G+ G+ G GP G QG G G PGP+G Sbjct: 326 ITGPPGDPGPKGFQGNKGEPGPPGPYGSPGAPGIGQQGIKGERGQEGRPGAPGPIGVGEP 385 Query: 834 FE-GPIGQAGGGGFRFEGSPGLRFEGSPGGLRFEGP-GGQPVGGLRFEGHRGQ--PVG-- 887 + GP G G G R G PG F G G EGP G Q + GL +G +G PVG Sbjct: 386 GQPGPRGPEGVPGER--GLPGEGFPGPKGEKGSEGPTGPQGLQGLSIKGEKGDIGPVGPQ 443 Query: 888 ------GLRFEGPHG--QPVGGLRFDNPRGQPVGGLRFEGGH-GPSG----AAIRFDGPH 934 G+ +G G P+G P GQ + G + E G GP+G I GP Sbjct: 444 GPMGIPGIGSQGEQGIQGPIGPPGPQGPAGQGLPGSKGEVGQMGPTGPRGPVGIGVQGPK 503 Query: 935 GQPGG-------GIRFE----GPLLQQGV-GMRF-EGPHGQSVAGLR-FEGQHNQLG--- 977 G+PG G+ E G + G+ G R EGP G+ G + EG+ G Sbjct: 504 GEPGSIGLPGQPGVPGEDGAAGKKGEAGLPGARGPEGPPGKGQPGPKGDEGKKGSKGNQG 563 Query: 978 --GNLRFEGPHGQPGV-------GIRFEGPLVQQGGGMRFEGPSVPG----GGLRIEGPL 1024 G EGP G+PG+ G GP +G GP +PG GL I GP Sbjct: 564 QRGLPGPEGPKGEPGIMGPFGMPGTSIPGPPGPKGDR---GGPGIPGFKGEPGLSIRGPK 620 Query: 1025 GQGGPRFEGCHALRFDGQPGQPSLLPRFDGLHGQPGPRFERTPGQPGPQ--RFDGPPGQQ 1082 G GPR G G P L + DG G PGPR PG PGP R G G + Sbjct: 621 GVQGPR----------GPVGAPGL--KGDGYPGVPGPR--GLPGPPGPMGLRGVGDTGAK 666 Query: 1083 VQPRFDGVPQRFDGPQHQQASRFDIPLGLQGTRFDNHPSQRLESVSFNQTGPYNDPPGNA 1142 +P G P GP + +G QG + D GP PPG Sbjct: 667 GEPGVRGPP----GPSGPRG------VGTQGPKGDTGQK--------GLPGP-PGPPGYG 707 Query: 1143 FNAPSQGLQFQRHEQIFDSPQG------PNFNGPHG 1172 SQG++ ++ Q F P+G P G HG Sbjct: 708 ----SQGIKGEQGPQGFPGPKGTMGHGLPGQKGEHG 739 Score = 102 bits (253), Expect = 4e-21 Identities = 130/414 (31%), Positives = 168/414 (40%), Gaps = 67/414 (16%) Query: 793 GSPGQMGGGGPLRFEGPQGQLGGGCPLRFE------GPPGPVGTPLRFEGPIGQAGGGGF 846 GSPG G GP +G G G P F+ GPPGP G+P IGQ G G Sbjct: 310 GSPGPYGPKGPRGIQGITGPPGDPGPKGFQGNKGEPGPPGPYGSP--GAPGIGQQGIKGE 367 Query: 847 RFE----GSPGLRFEGSPGGLRFEGPGGQPVGGLRFEGHRGQPVGGLRFEGPHGQPVGGL 902 R + G+PG G PG GP G P G RG P G F GP G+ Sbjct: 368 RGQEGRPGAPGPIGVGEPGQPGPRGPEGVP-------GERGLP--GEGFPGPKGEKGS-- 416 Query: 903 RFDNPRG-QPVGGLRFEGGHGPSGAAIRFDGPHGQPGGGIR----FEGPLLQQGVGMRFE 957 + P G Q + GL +G G G + GP G PG G + +GP+ G + Sbjct: 417 --EGPTGPQGLQGLSIKGEKGDIG-PVGPQGPMGIPGIGSQGEQGIQGPIGPPGP----Q 469 Query: 958 GPHGQSVAGLRFE-GQHNQLGG----NLRFEGPHGQPG-VGIRFEGPLVQQGGGMRFEGP 1011 GP GQ + G + E GQ G + +GP G+PG +G+ + + + G +G Sbjct: 470 GPAGQGLPGSKGEVGQMGPTGPRGPVGIGVQGPKGEPGSIGLPGQPGVPGEDGAAGKKGE 529 Query: 1012 SVPGGGLRIEGPLGQGGPRFEGCHALR-FDGQPGQPSLLPRFDGLHGQP------GPRFE 1064 + G EGP G+G P +G + G GQ LP +G G+P G Sbjct: 530 AGLPGARGPEGPPGKGQPGPKGDEGKKGSKGNQGQRG-LPGPEGPKGEPGIMGPFGMPGT 588 Query: 1065 RTPGQPGPQRFDGPPGQQVQPRFDGVP-QRFDGPQHQQASRFDIPLGLQGTRFDNHPSQR 1123 PG PGP+ G PG P F G P GP+ Q R P+G G + D +P Sbjct: 589 SIPGPPGPKGDRGGPG---IPGFKGEPGLSIRGPKGVQGPRG--PVGAPGLKGDGYP--- 640 Query: 1124 LESVSFNQTGPYNDP-PGNAFNAPSQGLQFQRHEQIFDSPQGPNFNGPHGPGNQ 1176 GP P P G + E P GP +GP G G Q Sbjct: 641 ------GVPGPRGLPGPPGPMGLRGVGDTGAKGEPGVRGPPGP--SGPRGVGTQ 686 Score = 77.0 bits (188), Expect = 1e-13 Identities = 106/347 (30%), Positives = 127/347 (36%), Gaps = 84/347 (24%) Query: 754 GPSRPSVARDGPTKMIFEGPNKLSPRIDGPPTPASLRFDGSPGQMGGGGPLRFEGPQGQL 813 GP+ P GP + +GP I P P DG+ G+ G G GP+G Sbjct: 487 GPTGPR----GPVGIGVQGPKGEPGSIGLPGQPGVPGEDGAAGKKGEAGLPGARGPEGPP 542 Query: 814 GGGCPLRFEGPPGPVGTPLRFEGPIGQAGGGGFRF-------EGSPGLRFEGSPGGLRFE 866 G +G PGP G EG G G G R +G PG+ G Sbjct: 543 G-------KGQPGPKGD----EGKKGSKGNQGQRGLPGPEGPKGEPGIMGPFGMPGTSIP 591 Query: 867 GPGGQ--PVGGLRFEGHRGQPVGGLRFEGPHGQPVGGLRFDNPRGQPVG--GLRFEGGHG 922 GP G GG G +G+P GL GP G PRG PVG GL+ +G G Sbjct: 592 GPPGPKGDRGGPGIPGFKGEP--GLSIRGPKG-------VQGPRG-PVGAPGLKGDGYPG 641 Query: 923 PSGAAIRFDGPHGQPGGGIRFEGPLLQQGVG-------MRFEGPHGQSVAGLRFEGQHNQ 975 GP G PG GP+ +GVG GP G S G R G Sbjct: 642 -------VPGPRGLPGP----PGPMGLRGVGDTGAKGEPGVRGPPGPS--GPRGVGTQGP 688 Query: 976 LG--GNLRFEGPHGQPGVGIRFEGPLVQQGGGMRFEGPSVPGGGLRIEGPLGQGGPRFEG 1033 G G GP G PG G + + + G F GP +G +G G P +G Sbjct: 689 KGDTGQKGLPGPPGPPGYGSQ---GIKGEQGPQGFPGP---------KGTMGHGLPGQKG 736 Query: 1034 CHALRFDGQPGQPSLLPRFDGLHGQPGPRFERTPGQPGPQRFDGPPG 1080 H R D G G G E PG PG Q GP G Sbjct: 737 EHGERGD------------VGKKGDKGEIGE--PGSPGKQGLQGPKG 769 Score = 65.1 bits (157), Expect = 5e-10 Identities = 112/419 (26%), Positives = 151/419 (36%), Gaps = 119/419 (28%) Query: 850 GSPGLRFEGSPGGLRFEGPGGQPVGGLRFEGHRGQPVG--------GLRFE--------- 892 G PG G+PG GP G P + E P G G R E Sbjct: 251 GPPGTH--GNPGIKGERGPKGNPGNAQKGEAGERGPGGIPGYKGDKGERGECGKPGIKGD 308 Query: 893 ----GPHGQ--PVGGLRFDNPRGQPVGGLRFEGGHGPSGAAIRFDGPHGQPGG------G 940 GP+G P G P G P G F+G G G GP+G PG G Sbjct: 309 KGSPGPYGPKGPRGIQGITGPPGDP-GPKGFQGNKGEPGP----PGPYGSPGAPGIGQQG 363 Query: 941 IRFE---------------------GPLLQQGV-------GMRFEGPHG----------Q 962 I+ E GP +GV G F GP G Q Sbjct: 364 IKGERGQEGRPGAPGPIGVGEPGQPGPRGPEGVPGERGLPGEGFPGPKGEKGSEGPTGPQ 423 Query: 963 SVAGLRFEGQHNQLGGNLRFEGPHGQPGVGIRFE-------GPLVQQG----------GG 1005 + GL +G+ + G + +GP G PG+G + E GP QG G Sbjct: 424 GLQGLSIKGEKGDI-GPVGPQGPMGIPGIGSQGEQGIQGPIGPPGPQGPAGQGLPGSKGE 482 Query: 1006 MRFEGPSVPGG--GLRIEGPLGQGGPRFEGCHALRFDGQPGQPSLLPRFDGLHGQ----- 1058 + GP+ P G G+ ++GP G+ G G PGQP +P DG G+ Sbjct: 483 VGQMGPTGPRGPVGIGVQGPKGEPGS----------IGLPGQPG-VPGEDGAAGKKGEAG 531 Query: 1059 -PGPRFERTP---GQPGPQRFDGPPGQQVQPRFDGVPQRFDGPQHQQASRFDIPLGLQGT 1114 PG R P GQPGP+ +G G + G+P +GP+ + P G+ GT Sbjct: 532 LPGARGPEGPPGKGQPGPKGDEGKKGSKGNQGQRGLPGP-EGPKGEPGIMG--PFGMPGT 588 Query: 1115 RFDNHPSQRLESVSFNQTGPYNDPPGNAFNAPSQGLQFQRHEQIFDSPQGPNFNGPHGP 1173 P + + G + PG + P +G+Q R +G + G GP Sbjct: 589 SIPGPPGPKGDRGGPGIPG-FKGEPGLSIRGP-KGVQGPRGPVGAPGLKGDGYPGVPGP 645 Score = 57.0 bits (136), Expect = 1e-07 Identities = 83/287 (28%), Positives = 109/287 (37%), Gaps = 69/287 (24%) Query: 893 GPHGQPVGGLRFDN-PRGQPVGGLRFEGGHGPSGAAIRFDGPHGQPGGGIRFEGPLLQQG 951 G HG P G++ + P+G P + E G G + G G+ G P ++ Sbjct: 254 GTHGNP--GIKGERGPKGNPGNAQKGEAGERGPGGIPGYKGDKGERG---ECGKPGIKGD 308 Query: 952 VGMRFEGPHGQSVAGLRFEGQHNQLGGNLRFEGPHGQPGVGIRFEGPLVQQGGGMRFEGP 1011 G GP+G G R G GP G PG F+G + G + P Sbjct: 309 KGS--PGPYGPK--GPR---------GIQGITGPPGDPGPK-GFQGNKGEPGPPGPYGSP 354 Query: 1012 SVPGGGLRIEGPLGQGGPRFEGCHALRFDGQPGQPSLLPRFDGLHGQPGPRFERTPGQPG 1071 PG +GQ G + E GQ G+P G PGP PGQPG Sbjct: 355 GAPG--------IGQQGIKGER-------GQEGRP----------GAPGPIGVGEPGQPG 389 Query: 1072 PQRFDGPPGQQVQPRFDGVP-QRFDGPQHQQASRFDI-PLGLQGTRFDNHPSQRLESVSF 1129 P+ +G PG++ G+P + F GP+ ++ S P GLQG S + E Sbjct: 390 PRGPEGVPGER------GLPGEGFPGPKGEKGSEGPTGPQGLQGL------SIKGEKGDI 437 Query: 1130 NQTGPYNDPPGNAFNAPSQGLQFQRHEQIFDSPQGPNFNGPHGPGNQ 1176 GP P SQG EQ P GP GP GP Q Sbjct: 438 GPVGPQG--PMGIPGIGSQG------EQGIQGPIGP--PGPQGPAGQ 474 Score = 44.3 bits (103), Expect = 0.001 Identities = 43/127 (33%), Positives = 54/127 (42%), Gaps = 24/127 (18%) Query: 746 AEDRPLFDGPSRPSVARDGPTKMIFEGPNKLSPR--IDGPPTPASLRFDGSPGQMGGGGP 803 A+ P GP PS GP + +GP + + + GPP P GS G G GP Sbjct: 665 AKGEPGVRGPPGPS----GPRGVGTQGPKGDTGQKGLPGPPGPPGY---GSQGIKGEQGP 717 Query: 804 LRFEGPQGQLGGGCPLRFEGPPGPVGTPLRFEGPIGQAGGGGFRFEGSPGLRFEGSPGGL 863 F GP+G +G G P G G G G +G+ G G G P GSPG Sbjct: 718 QGFPGPKGTMGHGLP----GQKGEHGE----RGDVGKKGDKG--EIGEP-----GSPGKQ 762 Query: 864 RFEGPGG 870 +GP G Sbjct: 763 GLQGPKG 769 >gi|89276751 alpha 1 type V collagen preproprotein [Homo sapiens] Length = 1838 Score = 102 bits (253), Expect = 4e-21 Identities = 159/504 (31%), Positives = 191/504 (37%), Gaps = 98/504 (19%) Query: 753 DGPSRPSVAR-----DGPTKMIFEGPNKLSPRIDGPPTPASLR-FDGSPGQ--------- 797 DGP+ P R GPT F GP GPP P G PGQ Sbjct: 939 DGPAGPPGERGPNGPQGPTG--FPGPK-------GPPGPPGKDGLPGHPGQRGETGFQGK 989 Query: 798 MGGGGPLRFEGPQGQLGGGCPLRFEGPPGPVGTPLRFEGPIGQAGGGGFRFEGSP-GLRF 856 G GP GPQG G P+ G PGP G P +G G AG G + + P GL Sbjct: 990 TGPPGPPGVVGPQGPTGETGPMGERGHPGPPGPPGE-QGLPGLAGKEGTKGDPGPAGLPG 1048 Query: 857 EGSPGGLR-FEGPGG--QPVGGLRFEGHRGQ-----PVGGLRFEGPHGQ--PVGGLRFDN 906 + P GLR F G G PVG L +G+ G P G GP G P+G Sbjct: 1049 KDGPPGLRGFPGDRGLPGPVGALGLKGNEGPPGPPGPAGSPGERGPAGAAGPIGIPGRPG 1108 Query: 907 PRGQ--PVGGLRFEGGHGPSGAAIR--FDGPHGQPG--------------------GGIR 942 P+G P G G GP G A R GP G PG G Sbjct: 1109 PQGPPGPAGEKGAPGEKGPQGPAGRDGLQGPVGLPGPAGPVGPPGEDGDKGEIGEPGQKG 1168 Query: 943 FEGPLLQQGV--GMRFEGPHGQ-SVAGLRFE-GQHNQLG--GNLRFEGPHGQPG----VG 992 +G +QG +GP GQ +G E G Q G G EGP G PG VG Sbjct: 1169 SKGDKGEQGPPGPTGPQGPIGQPGPSGADGEPGPRGQQGLFGQKGDEGPRGFPGPPGPVG 1228 Query: 993 IR-FEGPLVQQG--GGMRFEGPSVPGGGLRIEGPLGQGGPR-----FEGCHALRFDGQPG 1044 ++ GP ++G G + GP P G G G GP+ A+ G+PG Sbjct: 1229 LQGLPGPPGEKGETGDVGQMGPPGPPGPRGPSGAPGADGPQGPPGGIGNPGAVGEKGEPG 1288 Query: 1045 QPSLLPRFDGLHGQPGPRFER-TPGQPGPQRFDGPPGQQVQPRFDGV-----PQRFDG-- 1096 + P G G PGP+ ER G+ GP GPPG + P DG P F G Sbjct: 1289 EAG-EPGLPGEGGPPGPKGERGEKGESGPSGAAGPPGPKGPPGDDGPKGSPGPVGFPGDP 1347 Query: 1097 --PQHQQASRFDIPLGLQGTRFDNHPSQRLESVSFNQTGP-----YNDPPGNAFNAPSQG 1149 P + D P G +G D P Q + GP PPG A QG Sbjct: 1348 GPPGEPGPAGQDGPPGDKGD--DGEPGQTGSPGPTGEPGPSGPPGKRGPPGPAGPEGRQG 1405 Query: 1150 LQFQRHEQIFDSPQGPNFNGPHGP 1173 + + E + P P GP GP Sbjct: 1406 EKGAKGEAGLEGP--PGKTGPIGP 1427 Score = 99.8 bits (247), Expect = 2e-20 Identities = 127/403 (31%), Positives = 157/403 (38%), Gaps = 90/403 (22%) Query: 782 GPPTPASLR-FDGSPGQMGGGGPLRFEGPQGQLGGGCPLRFEGPPGPVGTPLRFEGPIGQ 840 GPP P + DG PG G GP GP GQ G GP G +G P +GP+G+ Sbjct: 691 GPPGPPGVTGMDGQPGPKGNVGPQGEPGPPGQQGNPGAQGLPGPQGAIGPPGE-KGPLGK 749 Query: 841 AGGGGFRFEGSPGLRFEGSPGGLRFEGPGGQPVGGLRFEGHRGQPVGGLRFEGPHGQPVG 900 G G PG +G PG EGP G+ +G +G P GP G P+G Sbjct: 750 PG-----LPGMPGA--DGPPGHPGKEGPPGE-------KGGQGPP-------GPQG-PIG 787 Query: 901 GLRFDNPRG----QPVGGLRFEGGHGPSGAAIRFDGPHGQPG--GGIRFEGPLLQQGVGM 954 + PRG + GL+ G F G G G G I GP + G Sbjct: 788 ---YPGPRGVKGADGIRGLKGTKGEKGEDGFPGFKGDMGIKGDRGEIGPPGPRGEDGP-- 842 Query: 955 RFEGPHGQSVAGLRFEGQHNQLGGNLRFEGPHGQPGVGIRFEGPLVQQGGGMRFEGPSVP 1014 EGP G+ GP+G P GPL G + P +P Sbjct: 843 --EGPKGRG--------------------GPNGDP-------GPLGPPGEKGKLGVPGLP 873 Query: 1015 GGGLRIEGPLGQ-GGPRFEGCHALRFD-GQPGQPSLLPRFDGLHGQPGPRFERTP----G 1068 G R +GP G G P F G + + G PG+P PR G G GPR ER P G Sbjct: 874 GYPGR-QGPKGSIGFPGFPGANGEKGGRGTPGKPG--PR--GQRGPTGPRGERGPRGITG 928 Query: 1069 QPGPQRFD------GPPGQQVQPRFDGVPQRFDGPQHQQASRFDIPLGLQGTRFDNHPSQ 1122 +PGP+ GPPG++ P P F GP+ P G G HP Q Sbjct: 929 KPGPKGNSGGDGPAGPPGER-GPNGPQGPTGFPGPKGPPG-----PPGKDG--LPGHPGQ 980 Query: 1123 RLESVSFNQTGPYNDPPGNAFNAPSQGLQFQRHEQIFDSPQGP 1165 R E+ +TGP PPG G E+ P GP Sbjct: 981 RGETGFQGKTGP-PGPPGVVGPQGPTGETGPMGERGHPGPPGP 1022 Score = 95.5 bits (236), Expect = 4e-19 Identities = 139/443 (31%), Positives = 174/443 (39%), Gaps = 87/443 (19%) Query: 782 GPPTPASLRFDGSPGQMGGGGPLRFEGPQGQLGGGCPLRFEGPPGPVGTPLRFEGPIGQA 841 GP P L G PG +G G +G G +G P +GPPGP G P G G+A Sbjct: 559 GPAGPMGLT--GRPGPVGPPGSGGLKGEPGDVGPQGPRGVQGPPGPAGKP----GRRGRA 612 Query: 842 GGGGFRFEGSPGLRFEGSPGGLRFEGPGGQPVGGLRFEGHRGQPVGGLRFEGPHGQPVGG 901 G G R G PG G G F+G G P +GHRG P GP G P G Sbjct: 613 GSDGAR--GMPGQ--TGPKGDRGFDGLAGLP----GEKGHRGDP-------GPSGPP-GP 656 Query: 902 LRFDNPRGQ--PVGGLRFEGGHGPSGAAIRFDGPHGQPG--GGIRFEG-PLLQQGVGMRF 956 D RG VG G GP G + GP G PG G +G P + VG + Sbjct: 657 PGDDGERGDDGEVGPRGLPGEPGPRG-LLGPKGPPGPPGPPGVTGMDGQPGPKGNVGPQG 715 Query: 957 E-GPHGQS-----------VAGLRFEGQHNQLG-----GNLRFEGPHGQPGVGIRFEGPL 999 E GP GQ + G+ LG G +GP G PG EGP Sbjct: 716 EPGPPGQQGNPGAQGLPGPQGAIGPPGEKGPLGKPGLPGMPGADGPPGHPGK----EGPP 771 Query: 1000 VQQGGGMRFEGPSVPGGGLRIEGPLG-QGGPRFEGCHALRFD-GQPGQPSL-----LPRF 1052 ++GG +GP P G + GP G +G G + + G+ G P + Sbjct: 772 GEKGG----QGPPGPQGPIGYPGPRGVKGADGIRGLKGTKGEKGEDGFPGFKGDMGIKGD 827 Query: 1053 DGLHGQPGPRFERTP----------GQPGPQRFDGPPGQQVQPRFDGVPQRFDGPQHQQA 1102 G G PGPR E P G PGP GPPG++ + G+P + G Q + Sbjct: 828 RGEIGPPGPRGEDGPEGPKGRGGPNGDPGPL---GPPGEKGKLGVPGLP-GYPGRQGPKG 883 Query: 1103 SRFDIP--------LGLQGTRFDNHP-SQRLESVSFNQTGP--YNDPPGNAFNAPSQGLQ 1151 S P G +GT P QR + + GP PG N+ G Sbjct: 884 S-IGFPGFPGANGEKGGRGTPGKPGPRGQRGPTGPRGERGPRGITGKPGPKGNSGGDGPA 942 Query: 1152 FQRHEQIFDSPQGP-NFNGPHGP 1173 E+ + PQGP F GP GP Sbjct: 943 GPPGERGPNGPQGPTGFPGPKGP 965 Score = 95.1 bits (235), Expect = 5e-19 Identities = 113/342 (33%), Positives = 141/342 (41%), Gaps = 91/342 (26%) Query: 754 GPSRPSVA--RDGPTKMIFEGP-----NKLSPRIDGPPTPASLRFDGSPGQMGGGGPLRF 806 GP PS A DGP +GP N + G P A G PG G GGP Sbjct: 1255 GPRGPSGAPGADGP-----QGPPGGIGNPGAVGEKGEPGEA-----GEPGLPGEGGPPGP 1304 Query: 807 EGPQGQLGGGCPLRFEGPPGPVGTPLRFEGPIGQAGGGGFRFEGSPGLRFEGSPGGLRFE 866 +G +G+ G P GPPGP G P +GP G G G F G PG G PG + Sbjct: 1305 KGERGEKGESGPSGAAGPPGPKGPP-GDDGPKGSPGPVG--FPGDPGP--PGEPGPAGQD 1359 Query: 867 GPGGQPVGGLRFEGHRGQPVGGLRFEGPHGQPVGGLRFDNPRGQPVGGLRFEGGHGPSGA 926 GP G +G G+P G GP G+P P G P G GP G Sbjct: 1360 GPPGD-------KGDDGEP-GQTGSPGPTGEP-------GPSGPP-------GKRGPPGP 1397 Query: 927 AIRFDGPHGQPG-GGIRFEGPLLQQGVGMRFEGPHGQSVAGLRFEGQHNQLGGNLRFEGP 985 A GP G+ G G + E L EGP G++ G + +G Sbjct: 1398 A----GPEGRQGEKGAKGEAGL---------EGPPGKT--------------GPIGPQGA 1430 Query: 986 HGQPGV-GIR-FEGPLVQQG--GGMRFEGPSVPGGGLRIEGPLGQGGPRFEGCHALRFDG 1041 G+PG G+R GP+ +QG G +GP P G + G G GP+ G Sbjct: 1431 PGKPGPDGLRGIPGPVGEQGLPGSPGPDGPPGPMGPPGLPGLKGDSGPK----------G 1480 Query: 1042 QPGQPSLLPRFDGLHGQPGPRFER-TPGQPGPQRFDGPPGQQ 1082 + G P L+ GL G PG + E+ G PGPQ GP G+Q Sbjct: 1481 EKGHPGLI----GLIGPPGEQGEKGDRGLPGPQGSSGPKGEQ 1518 Score = 94.0 bits (232), Expect = 1e-18 Identities = 138/439 (31%), Positives = 175/439 (39%), Gaps = 66/439 (15%) Query: 772 GPNKLSPRIDGPPTPASLRFDGSPGQMGGGGPLRFEGPQGQLGGGCPLRFEGPPGPVGTP 831 GP + P P DG PG G EGP G+ GG +GPPGP G P Sbjct: 739 GPPGEKGPLGKPGLPGMPGADGPPGHPGK------EGPPGEKGG------QGPPGPQG-P 785 Query: 832 LRFEGPIGQAGGGGFR-FEGSPGLR----FEGSPGGLRFEGPGGQ--PVGGLRFEGHRGQ 884 + + GP G G G R +G+ G + F G G + +G G+ P G +G G Sbjct: 786 IGYPGPRGVKGADGIRGLKGTKGEKGEDGFPGFKGDMGIKGDRGEIGPPGPRGEDGPEGP 845 Query: 885 PVGGLRFEGPHGQPVGGLRFDNPRGQ-PVGGL-RFEGGHGPSGAA--IRFDGPHGQPGG- 939 G GP+G P G L +G+ V GL + G GP G+ F G +G+ GG Sbjct: 846 KGRG----GPNGDP-GPLGPPGEKGKLGVPGLPGYPGRQGPKGSIGFPGFPGANGEKGGR 900 Query: 940 GIRFE-GPLLQQG-VGMRFE----------GPHGQS----VAGLRFEGQHNQLGGNLRFE 983 G + GP Q+G G R E GP G S AG E N G F Sbjct: 901 GTPGKPGPRGQRGPTGPRGERGPRGITGKPGPKGNSGGDGPAGPPGERGPNGPQGPTGFP 960 Query: 984 GPHGQPGVGIR--FEGPLVQQG--GGMRFEGPSVPGGGLRIEGPLGQGGPRFEGCHALRF 1039 GP G PG + G Q+G G GP P G + +GP G+ GP E H Sbjct: 961 GPKGPPGPPGKDGLPGHPGQRGETGFQGKTGPPGPPGVVGPQGPTGETGPMGERGH---- 1016 Query: 1040 DGQPGQPSLLPRFDGLHGQPGPRFERTPGQPGPQRF---DGPPGQQVQPRFDGVPQRFDG 1096 G PG P GL G G E T G PGP DGPPG + P G+P Sbjct: 1017 PGPPGPPG----EQGLPGLAGK--EGTKGDPGPAGLPGKDGPPGLRGFPGDRGLPGPVGA 1070 Query: 1097 PQHQQASRFDIPLGLQGTRFDNHPSQRLESVSF-NQTGPYNDPPGNAFNAPSQGLQFQRH 1155 + P G G+ + P+ + + GP PPG A + G + + Sbjct: 1071 LGLKGNEGPPGPPGPAGSPGERGPAGAAGPIGIPGRPGP-QGPPGPAGEKGAPGEKGPQG 1129 Query: 1156 EQIFDSPQGP-NFNGPHGP 1173 D QGP GP GP Sbjct: 1130 PAGRDGLQGPVGLPGPAGP 1148 Score = 94.0 bits (232), Expect = 1e-18 Identities = 132/457 (28%), Positives = 170/457 (37%), Gaps = 119/457 (26%) Query: 716 PRYEDSDKPFVDSPASRFAGLDTNQRLTALAEDRPLFDGPSRPSVARDGPT--------- 766 P ED DK + P + + D + + P GP P + + GP+ Sbjct: 1151 PPGEDGDKGEIGEPGQKGSKGDKGE------QGPPGPTGPQGP-IGQPGPSGADGEPGPR 1203 Query: 767 --KMIFEGPNKLSPR-IDGPPTPASLRF----------DGSPGQMGGGGPLRFEGPQGQL 813 + +F PR GPP P L+ G GQMG GP GP G Sbjct: 1204 GQQGLFGQKGDEGPRGFPGPPGPVGLQGLPGPPGEKGETGDVGQMGPPGPPGPRGPSGAP 1263 Query: 814 GGGCPLRFEGPPGPVGTPLRFEGPIGQAGGGGFRFEGSPGLRFEGSPGGLRFE------- 866 G P +GPPG +G P G +G+ G G G PGL EG P G + E Sbjct: 1264 GADGP---QGPPGGIGNP----GAVGEKGEPGEA--GEPGLPGEGGPPGPKGERGEKGES 1314 Query: 867 GPGGQ-----PVGGLRFEGHRGQP--VGGLRFEGPHGQPVGGLRFDNPRGQ--PVGGLRF 917 GP G P G +G +G P VG GP G+P P GQ P G Sbjct: 1315 GPSGAAGPPGPKGPPGDDGPKGSPGPVGFPGDPGPPGEP-------GPAGQDGPPGDKGD 1367 Query: 918 EGGHGPSGAAIRFDGPHGQPGGGIRFEGPLLQQGVGMRFEGPHG-QSVAGLRFEGQHNQL 976 +G G +G+ GP G+PG GP ++G GP G Q G + E Sbjct: 1368 DGEPGQTGSP----GPTGEPGPS----GPPGKRGPPGP-AGPEGRQGEKGAKGEAGLEGP 1418 Query: 977 GGNLRFEGPHGQPGV----GIR-FEGPLVQQG--GGMRFEGPSVPGGGLRIEGPLGQGGP 1029 G GP G PG G+R GP+ +QG G +GP P G + G G GP Sbjct: 1419 PGKTGPIGPQGAPGKPGPDGLRGIPGPVGEQGLPGSPGPDGPPGPMGPPGLPGLKGDSGP 1478 Query: 1030 RFEGCHA--LRFDGQPGQ-----------------------------PSLLPRFDGLHGQ 1058 + E H + G PG+ P P GL G Sbjct: 1479 KGEKGHPGLIGLIGPPGEQGEKGDRGLPGPQGSSGPKGEQGITGPSGPIGPPGPPGLPGP 1538 Query: 1059 PGPRFER----------TPGQPGPQRFDGPPGQQVQP 1085 PGP+ + G PGP GPPG+ +QP Sbjct: 1539 PGPKGAKGSSGPTGPKGEAGHPGPPGPPGPPGEVIQP 1575 Score = 92.0 bits (227), Expect = 4e-18 Identities = 143/461 (31%), Positives = 174/461 (37%), Gaps = 100/461 (21%) Query: 778 PRIDGPPTPASLRFDGSPGQMGGGGPLRFEGPQGQLGGGCPLRFEGPPGPVGTPLRFEGP 837 P GPP PA + G+PG+ G GP +G QG +G GP GPVG P +G Sbjct: 1107 PGPQGPPGPAGEK--GAPGEKGPQGPAGRDGLQGPVG------LPGPAGPVGPPGE-DGD 1157 Query: 838 IGQAGGGGFRFEGSPGLRFE-GSPGGLRFEGPGGQP--VGGLRFEGHRGQP--------V 886 G+ G G + GS G + E G PG +GP GQP G G RGQ Sbjct: 1158 KGEIGEPGQK--GSKGDKGEQGPPGPTGPQGPIGQPGPSGADGEPGPRGQQGLFGQKGDE 1215 Query: 887 GGLRFEGPHGQPVGGLRFDNPRGQP-----VGGLRFEGGHGPSG--AAIRFDGPHGQPGG 939 G F GP G PVG P G+ VG + G GP G A DGP G PGG Sbjct: 1216 GPRGFPGPPG-PVGLQGLPGPPGEKGETGDVGQMGPPGPPGPRGPSGAPGADGPQGPPGG 1274 Query: 940 GIRFEGPLLQQGV-------GMRFEG-PHGQSVAGLRFEGQHNQLGGNLRFEGPHGQPGV 991 I G + ++G G+ EG P G G R E + G GP G PG Sbjct: 1275 -IGNPGAVGEKGEPGEAGEPGLPGEGGPPGPK--GERGEKGESGPSGAAGPPGPKGPPGD 1331 Query: 992 GIRFEGPLVQQGGGMRFEGPSVPGGGLRIEGPLGQGGPRFEGCHALRFDGQPGQ------ 1045 +GP G + F G P G GP GQ GP + DG+PGQ Sbjct: 1332 ----DGPKGSPGP-VGFPGDPGPPGE---PGPAGQDGPPGDKGD----DGEPGQTGSPGP 1379 Query: 1046 -----PSLLPRFDGLHGQPGPRFER-------------------------TPGQPGPQRF 1075 PS P G G GP + PG+PGP Sbjct: 1380 TGEPGPSGPPGKRGPPGPAGPEGRQGEKGAKGEAGLEGPPGKTGPIGPQGAPGKPGPDGL 1439 Query: 1076 DGPPGQQVQPRFDGVPQRFDGPQHQQASRFDIPLGLQGTRFDNHP-SQRLESVSFNQTGP 1134 G PG + G P DGP P GL G + D+ P ++ GP Sbjct: 1440 RGIPGPVGEQGLPGSPGP-DGPPGPMG-----PPGLPGLKGDSGPKGEKGHPGLIGLIGP 1493 Query: 1135 YND--PPGNAFNAPSQGLQFQRHEQIFDSPQGPNFNGPHGP 1173 + G+ QG + EQ P GP GP GP Sbjct: 1494 PGEQGEKGDRGLPGPQGSSGPKGEQGITGPSGP--IGPPGP 1532 Score = 74.3 bits (181), Expect = 8e-13 Identities = 117/373 (31%), Positives = 135/373 (36%), Gaps = 80/373 (21%) Query: 750 PLFDGPSRPSVARDG-PTKM--IFEG--------PNKLSPRIDGPPTPASLRFDGSPGQM 798 P +D S PS G P I+EG K P I P + +G PG Sbjct: 419 PYYDPTSSPSEIGPGMPANQDTIYEGIGGPRGEKGQKGEPAIIEP----GMLIEGPPGPE 474 Query: 799 GGGGPLRFEGPQGQLGGGCPLRFEGPPGPVGTPLRFEGPIGQAG-GGGFRFEGSPG--LR 855 G G GP G + GP G VG P GP G+ G G G PG L Sbjct: 475 GPAG---LPGPPGTM---------GPTGQVGDPGE-RGPPGRPGLPGADGLPGPPGTMLM 521 Query: 856 FEGSPGGLRFEGPGGQPVGGLRFEGHRGQPVGGLRFEGPHGQPVGGLRFDNPRGQP-VGG 914 GG G G V + L GP G P+G P G P GG Sbjct: 522 LPFRFGGGGDAGSKGPMVSAQESQAQAILQQARLALRGPAG-PMGLTGRPGPVGPPGSGG 580 Query: 915 LRFEGGH-GPSG--AAIRFDGPHGQPG--GGIRFEGPLLQQGVGMRFEGPHG----QSVA 965 L+ E G GP G GP G+PG G +G G GP G +A Sbjct: 581 LKGEPGDVGPQGPRGVQGPPGPAGKPGRRGRAGSDGARGMPGQ----TGPKGDRGFDGLA 636 Query: 966 GLRFEGQHNQLGGNLRFEGPHGQPGVGIRFEGPLVQQGGGMRFEGPSVPGGGLRIEGPLG 1025 GL E H G+ GP G PG G +G P G GP G Sbjct: 637 GLPGEKGHR---GDPGPSGPPGPPG-----------DDGERGDDGEVGPRGLPGEPGPRG 682 Query: 1026 QGGPRFEGCHALRFDGQPGQPSLLPRFDGLHGQPGPRFERTPGQPGPQRFDGPPGQQVQP 1085 GP+ G PG P P G+ GQPGP+ G GPQ GPPGQQ P Sbjct: 683 LLGPK----------GPPGPPG-PPGVTGMDGQPGPK-----GNVGPQGEPGPPGQQGNP 726 Query: 1086 RFDGVPQRFDGPQ 1098 G+P GPQ Sbjct: 727 GAQGLP----GPQ 735 Score = 36.2 bits (82), Expect = 0.25 Identities = 22/51 (43%), Positives = 24/51 (47%), Gaps = 2/51 (3%) Query: 782 GPPTPASLRFDGSPGQMGGGGPLRFEGPQGQLGGGCPLRFEGPPGPVGTPL 832 GPP P L G PG G G GP+G+ G P GPPG V PL Sbjct: 1528 GPPGPPGL--PGPPGPKGAKGSSGPTGPKGEAGHPGPPGPPGPPGEVIQPL 1576 >gi|111118976 collagen, type II, alpha 1 isoform 1 precursor [Homo sapiens] Length = 1487 Score = 101 bits (252), Expect = 5e-21 Identities = 143/453 (31%), Positives = 178/453 (39%), Gaps = 70/453 (15%) Query: 754 GPSRPSVARDGPTKMIFEGP--NKLSPRIDGPP----TPASLRFDGSPGQMGGGGPLRFE 807 GP P AR P G ++ P +DG P GSPG+ G GP+ Sbjct: 267 GPPGPQGARGFPGTPGLPGVKGHRGYPGLDGAKGEAGAPGVKGESGSPGENGSPGPMGPR 326 Query: 808 GPQGQLGGGCPLRF------EGPPGPVGTPLRFEGPIGQAGGGGFRFEGSPGLRFEGSPG 861 G G+ G P +G PGP G P GP+G AGG G F G+PG + E P Sbjct: 327 GLPGERGRTGPAGAAGARGNDGQPGPAGPP----GPVGPAGGPG--FPGAPGAKGEAGPT 380 Query: 862 GLRFEGPGGQPVGGLRFEGHRGQPVGGLRFEGPHGQPVGGLRFDNPRGQPVGGLRFEGGH 921 G R GP G +G RG+P G G P NP + G + G Sbjct: 381 GAR--GPEGA-------QGPRGEP-------GTPGSPGPAGASGNPGTDGIPGAKGSAGA 424 Query: 922 GPSGAAIRFDGPHGQPG--GGIRFEGPLLQQG----VGMRFE-GPHGQ-SVAGLRFEGQH 973 A F GP G PG G GP Q G G + E GP G+ AG +G Sbjct: 425 PGIAGAPGFPGPRGPPGPQGATGPLGPKGQTGEPGIAGFKGEQGPKGEPGPAGP--QGAP 482 Query: 974 NQLGGNLRFEGPHGQPGVGIRFEGPLVQQG--GGMRF---EGPSVPGGGLRIEGPLGQGG 1028 G + G G+PG G+ GP ++G G F +G + P G GP G G Sbjct: 483 GPAGEEGK-RGARGEPG-GVGPIGPPGERGAPGNRGFPGQDGLAGPKGAPGERGPSGLAG 540 Query: 1029 PRFEGCHALRFDGQPGQPSLLPRFDGLHGQP---GPRFERTP-GQPGPQRFDGPPGQQVQ 1084 P+ A G+PG+P LP GL G+P GP+ + P G PG GPPG Q Sbjct: 541 PK----GANGDPGRPGEPG-LPGARGLTGRPGDAGPQGKVGPSGAPGEDGRPGPPGPQGA 595 Query: 1085 PRFDGVPQRFDGPQHQQASRFDIPLGLQGTR-FDNHPSQRLESVSFNQTGPYNDPPGNAF 1143 GV F GP+ G G + P R +TG PPG A Sbjct: 596 RGQPGV-MGFPGPKGANGEP-----GKAGEKGLPGAPGLRGLPGKDGETGAAG-PPGPAG 648 Query: 1144 NAPSQGLQFQRHEQIFDSPQGPNFNGPHGPGNQ 1176 A +G Q F GP GP G G + Sbjct: 649 PAGERGEQGAPGPSGFQGLPGP--PGPPGEGGK 679 Score = 95.9 bits (237), Expect = 3e-19 Identities = 132/405 (32%), Positives = 153/405 (37%), Gaps = 76/405 (18%) Query: 777 SPRIDGPPTPASLRFDGSPGQMGGGGPLRFEGPQGQLGGGCPLRFEGPPGPVGTPLRFEG 836 +P GPP P+ DG G G GP G G G P +G PG G P EG Sbjct: 913 NPGPPGPPGPSGK--DGPKGARGDSGPPGRAGEPGLQGPAGPPGEKGEPGDDG-PSGAEG 969 Query: 837 PIGQAGGGGFR-FEGSPGLRFE-GSPGGLRFEGPGGQP--VGGLRFEGHRGQP--VGGLR 890 P G G G R G PG R E G PG GP G+P G G RG P VG Sbjct: 970 PPGPQGLAGQRGIVGLPGQRGERGFPG---LPGPSGEPGKQGAPGASGDRGPPGPVGPPG 1026 Query: 891 FEGPHGQP--VGGLRFDNPRGQPVGGLRFEGGHGPSGA--AIRFDGPHGQPG-------- 938 GP G+P G D P G+ G +G G +GA A GP G PG Sbjct: 1027 LTGPAGEPGREGSPGADGPPGRD-GAAGVKGDRGETGAVGAPGAPGPPGSPGPAGPTGKQ 1085 Query: 939 ---GGIRFEGPLLQQG-VGMR-FEGPHG-QSVAGLRFEGQHNQLGGNLRFEGPHGQPGVG 992 G +GP+ G G R +GP G + G E L G+ F G G PG Sbjct: 1086 GDRGEAGAQGPMGPSGPAGARGIQGPQGPRGDKGEAGEPGERGLKGHRGFTGLQGLPGP- 1144 Query: 993 IRFEGPLVQQGG-------GMRFE----GPSVPGGGLRIEGPLGQGGPRFEGCHALRFDG 1041 GP QG G R GPS G I GP+G GPR Sbjct: 1145 ---PGPSGDQGASGPAGPSGPRGPPGPVGPSGKDGANGIPGPIGPPGPR----------- 1190 Query: 1042 QPGQPSLLPRFDGLHGQPGPRFERTPGQPGPQRFDGPPGQQV-QPRFDGVPQRFDGPQHQ 1100 G G+ GP PG PGP GPPG + F G+ R GP Sbjct: 1191 ------------GRSGETGP--AGPPGNPGPPGPPGPPGPGIDMSAFAGLGPREKGPDPL 1236 Query: 1101 QASRFDIPLGLQGTR-FDNHPSQRLESVSFNQTGPYNDPPGNAFN 1144 Q R D G G R D L+S++ NQ P G+ N Sbjct: 1237 QYMRADQAAG--GLRQHDAEVDATLKSLN-NQIESIRSPEGSRKN 1278 Score = 88.6 bits (218), Expect = 4e-17 Identities = 146/459 (31%), Positives = 165/459 (35%), Gaps = 104/459 (22%) Query: 750 PLFDGPSRPSVARDGPTKMIFEGPNKLSPRIDGPPTPASLRFDGSPGQMGGGGPLRFEGP 809 P DGP S GP GP P GPP G PG+ G G +G Sbjct: 725 PGTDGPKGAS----GPA-----GP----PGAQGPPG-----LQGMPGERGAAGIAGPKGD 766 Query: 810 QGQLG-----------GGCPLRFE-GPPGPVGT--PLRFEGPIGQAGGGGFRFEGSPGLR 855 +G +G GG L GPPGP G GP G AG G R G+PG R Sbjct: 767 RGDVGEKGPEGAPGKDGGRGLTGPIGPPGPAGANGEKGEVGPPGPAGSAGAR--GAPGER 824 Query: 856 FE-GSPGGLRFEGP---GGQPVGGLRFEGHRGQPVGGLRFEGPHGQPVGGLRFDNPRGQP 911 E G PG F GP GQP G +G GQ G GP G P G P G Sbjct: 825 GETGPPGPAGFAGPPGADGQP-GAKGEQGEAGQK-GDAGAPGPQG-PSGAPGPQGPTG-V 880 Query: 912 VGGLRFEGGHGPSGAAIRFDGPHGQ--PGGGIRFEGPLLQQGVGMRFEGPHGQS----VA 965 G G GP GA F G G+ P G GP GP G S Sbjct: 881 TGPKGARGAQGPPGAT-GFPGAAGRVGPPGSNGNPGP----------PGPPGPSGKDGPK 929 Query: 966 GLRFEGQHNQLGGNLRFEGPHGQPGVGIRFEGPLVQQGGGMRFEGPSVPGGGLRIEGPLG 1025 G R + G +GP G PG E G EGP P G G +G Sbjct: 930 GARGDSGPPGRAGEPGLQGPAGPPG-----EKGEPGDDGPSGAEGPPGPQGLAGQRGIVG 984 Query: 1026 QGGPRFEGCHALRFDGQPGQPSLLPRFDGLHGQPGPRFER-TPGQPGPQRFDGP---PGQ 1081 G R E F G PG PS P G G PG +R PG GP GP PG+ Sbjct: 985 LPGQRGE----RGFPGLPG-PSGEP---GKQGAPGASGDRGPPGPVGPPGLTGPAGEPGR 1036 Query: 1082 QVQPRFDGVPQRFDGPQHQQASRFDIPLGLQGTRFDNHPSQRLESVSFNQTGPYNDPPGN 1141 + P DG P R D G++G R E+ + G PPG+ Sbjct: 1037 EGSPGADGPPGR------------DGAAGVKG--------DRGETGAVGAPGA-PGPPGS 1075 Query: 1142 AFNAPSQGLQFQRHEQIFDSPQGPN-------FNGPHGP 1173 A G Q R E P GP+ GP GP Sbjct: 1076 PGPAGPTGKQGDRGEAGAQGPMGPSGPAGARGIQGPQGP 1114 Score = 87.4 bits (215), Expect = 1e-16 Identities = 137/432 (31%), Positives = 161/432 (37%), Gaps = 99/432 (22%) Query: 782 GPPTPASLRFD----GSPGQMGGGGPLRFEGPQGQLGGGCPLRFEGPPGPVGTPLRFEGP 837 GPP PA + G PG G G G +G+ G P F GPPG G P +G Sbjct: 792 GPPGPAGANGEKGEVGPPGPAGSAGARGAPGERGETGPPGPAGFAGPPGADGQP-GAKGE 850 Query: 838 IGQAGGGGFRFEGSPGLR----FEGSPGGLRFEGPGGQ-----PVGGLRFEGHRGQ--PV 886 G+AG G G+PG + G G GP G P G F G G+ P Sbjct: 851 QGEAGQKG--DAGAPGPQGPSGAPGPQGPTGVTGPKGARGAQGPPGATGFPGAAGRVGPP 908 Query: 887 GGLRFEGPHGQPVGGLRFDNPRGQPVGGLRFEGGHGPSGAAIR--FDGPHGQPG--GGIR 942 G GP G P G D P+G G GP G A GP G PG G Sbjct: 909 GSNGNPGPPGPP-GPSGKDGPKGA-------RGDSGPPGRAGEPGLQGPAGPPGEKGEPG 960 Query: 943 FEGPLLQQGVGMRFEGPHG-QSVAGLR-FEGQHNQLG--GNLRFEGPHGQPGVGIRFEGP 998 +GP EGP G Q +AG R G Q G G GP G+PG Sbjct: 961 DDGP-------SGAEGPPGPQGLAGQRGIVGLPGQRGERGFPGLPGPSGEPG-------- 1005 Query: 999 LVQQG--GGMRFEGPSVPGGGLRIEGPLGQGGPRFEGCHALRFDGQPGQPSLLPRFDGLH 1056 +QG G GP P G + GP G+ P EG DG PG+ DG Sbjct: 1006 --KQGAPGASGDRGPPGPVGPPGLTGPAGE--PGREGSPGA--DGPPGR-------DGAA 1052 Query: 1057 GQPGPRFER----TPGQPGPQRFDGPPGQ--QVQPRFDGVPQRFDGPQHQQASRFDIPLG 1110 G G R E PG PGP GP G + R + Q GP +R G Sbjct: 1053 GVKGDRGETGAVGAPGAPGPPGSPGPAGPTGKQGDRGEAGAQGPMGPSGPAGAR-----G 1107 Query: 1111 LQGTRFDNHPSQRLESVSFNQTGPYNDPPGNAFNAPSQGLQFQRHEQIFDSPQGPNFNGP 1170 +QG + GP D G A +GL+ R F QG GP Sbjct: 1108 IQGPQ-----------------GPRGD-KGEAGEPGERGLKGHRG---FTGLQG--LPGP 1144 Query: 1171 HGP-GNQSFSNP 1181 GP G+Q S P Sbjct: 1145 PGPSGDQGASGP 1156 Score = 84.0 bits (206), Expect = 1e-15 Identities = 118/380 (31%), Positives = 143/380 (37%), Gaps = 78/380 (20%) Query: 769 IFEGP-NKLSPRIDGPPTPASLR----FDGSPGQMGG---GGPLRFEGPQGQLG------ 814 + +GP + PR GPP PA F G+PG+ G GP+ GP G G Sbjct: 198 VMQGPMGPMGPR--GPPGPAGAPGPQGFQGNPGEPGEPGVSGPMGPRGPPGPPGKPGDDG 255 Query: 815 -GGCPLRF-----EGPPGPVGTP--------------LRFEGPIGQAGGGGFRFE-GSPG 853 G P + GP G G P +G G+AG G + E GSPG Sbjct: 256 EAGKPGKAGERGPPGPQGARGFPGTPGLPGVKGHRGYPGLDGAKGEAGAPGVKGESGSPG 315 Query: 854 LRFEGSPGGLRFEGPGGQ-----PVGGLRFEGHRGQPVGGLRFEGPHGQPVGGLRFDNPR 908 GSPG + G G+ P G G+ GQP G GP G P GG F Sbjct: 316 --ENGSPGPMGPRGLPGERGRTGPAGAAGARGNDGQP-GPAGPPGPVG-PAGGPGFPGAP 371 Query: 909 GQPVGGLRFEGGHGPSGAAIRFDGPHGQPGGGIRFEGPLLQQGVGMRFEGPHGQSVAGLR 968 G G G GP GA GP G+PG GP G P + G + Sbjct: 372 GAK-GEAGPTGARGPEGA----QGPRGEPGTP-GSPGPAGASG------NPGTDGIPGAK 419 Query: 969 FEGQHNQLGGNLRFEGPHGQPGVGIRFEGPLVQQG-----GGMRFEGPSVPGGGLRIEGP 1023 + G F GP G PG GPL +G G F+G P G GP Sbjct: 420 GSAGAPGIAGAPGFPGPRGPPGPQ-GATGPLGPKGQTGEPGIAGFKGEQGPKGEPGPAGP 478 Query: 1024 LGQGGPR-FEGCHALRFD-------GQPGQPSL-----LPRFDGLHGQPGPRFERTP-GQ 1069 G GP EG R + G PG+ P DGL G G ER P G Sbjct: 479 QGAPGPAGEEGKRGARGEPGGVGPIGPPGERGAPGNRGFPGQDGLAGPKGAPGERGPSGL 538 Query: 1070 PGPQRFDGPPGQQVQPRFDG 1089 GP+ +G PG+ +P G Sbjct: 539 AGPKGANGDPGRPGEPGLPG 558 Score = 80.5 bits (197), Expect = 1e-14 Identities = 144/450 (32%), Positives = 168/450 (37%), Gaps = 92/450 (20%) Query: 772 GPNKLSPRIDGPPTPASLRFD-GSPGQMGGGGPLRFEGPQGQLGGGCPLRFEGPPGPVGT 830 GP K P GP R D G G+ G GP +G G G P GPPGP G Sbjct: 117 GP-KGPPGPQGPAGEQGPRGDRGDKGEKGAPGPRGRDGEPGTPGNPGPPGPPGPPGPPGL 175 Query: 831 -----------------------------PLRFEGPIGQAGGGGFR-FEGSPGLRFE-GS 859 P+ GP G AG G + F+G+PG E G Sbjct: 176 GGNFAAQMAGGFDEKAGGAQLGVMQGPMGPMGPRGPPGPAGAPGPQGFQGNPGEPGEPGV 235 Query: 860 PGGLRFEGPGGQPVGGLRFEGHRGQPVGGLRFEGPHGQPVGGLRFDNPRGQP-VGGLR-- 916 G + GP G P G +G G+P G GP G P G F G P V G R Sbjct: 236 SGPMGPRGPPGPP-GKPGDDGEAGKP-GKAGERGPPG-PQGARGFPGTPGLPGVKGHRGY 292 Query: 917 --FEGGHGPSGAAIRFDGPHGQPGGGIRFEGPLLQQGV-GMRFE-GPHGQSVAGLRFEGQ 972 +G G +GA G G PG GP+ +G+ G R GP G AG R Sbjct: 293 PGLDGAKGEAGAP-GVKGESGSPGEN-GSPGPMGPRGLPGERGRTGPAG--AAGAR---- 344 Query: 973 HNQLGGNLRFEGPHGQPGVGIRFEGPLVQQGGGMRFEGPSVPG--GGLRIEGPLGQGGPR 1030 GN GP G P GP+ G GP PG G GP G GP Sbjct: 345 -----GNDGQPGPAGPP-------GPVGPAG------GPGFPGAPGAKGEAGPTGARGP- 385 Query: 1031 FEGCHALRFDGQPGQPSLLPRFDGLHGQPGPRFERTPGQPGPQRFDGPPGQQVQPRFDGV 1090 EG R G+PG P P G G PG T G PG + G PG P F G Sbjct: 386 -EGAQGPR--GEPGTPG-SPGPAGASGNPG-----TDGIPGAKGSAGAPGIAGAPGFPG- 435 Query: 1091 PQRFDGPQHQQASRFDIPLGLQG-TRFDNHPSQRLESVSFNQTGPYNDPPGNAFNAPSQG 1149 P+ GPQ PLG +G T + E + GP P G A +G Sbjct: 436 PRGPPGPQGATG-----PLGPKGQTGEPGIAGFKGEQGPKGEPGPAG-PQGAPGPAGEEG 489 Query: 1150 LQFQRHEQIFDSPQGPNFNGPHG-PGNQSF 1178 + R E P GP G G PGN+ F Sbjct: 490 KRGARGEPGGVGPIGP--PGERGAPGNRGF 517 Score = 39.7 bits (91), Expect = 0.023 Identities = 48/164 (29%), Positives = 57/164 (34%), Gaps = 35/164 (21%) Query: 1025 GQGGPRFEGCHALRFDGQPGQPSLLPRFDGLHGQPGPR---FERTP----------GQPG 1071 GQ GP+ GQ G+P + G G PGP+ E+ P G PG Sbjct: 98 GQPGPK----------GQKGEPGDIKDIVGPKGPPGPQGPAGEQGPRGDRGDKGEKGAPG 147 Query: 1072 PQRFDGPPGQQVQPRFDGVPQRFDGPQHQQASRFDIPLGLQGTRFDNHPSQRLESVSFNQ 1131 P+ DG PG P G P GP + + G FD V Sbjct: 148 PRGRDGEPGTPGNPGPPGPP----GPPGPPGLGGNFAAQMAG-GFDEKAGGAQLGVMQGP 202 Query: 1132 TGPY--NDPPGNAFNAPSQGLQFQRHEQIFDSPQGPNFNGPHGP 1173 GP PPG A QG Q E P P +GP GP Sbjct: 203 MGPMGPRGPPGPAGAPGPQGFQGNPGE-----PGEPGVSGPMGP 241 Score = 39.3 bits (90), Expect = 0.030 Identities = 52/162 (32%), Positives = 68/162 (41%), Gaps = 30/162 (18%) Query: 713 LKRPRYEDSDKPFVDSPASRFAGLDTNQRLTALAEDRPLFDGPSRPSVARDGPTKMIFEG 772 ++ P+ DK P R GL ++ T L + P GPS A GP G Sbjct: 1108 IQGPQGPRGDKGEAGEPGER--GLKGHRGFTGL-QGLPGPPGPSGDQGA-SGPA-----G 1158 Query: 773 PNKLSPRIDGPPTPASLR----FDGSPGQMGGGGPLRFEGPQGQLGGGCPLRFEGPPGPV 828 P+ PR GPP P +G PG +G GP G G+ G P GPPGP Sbjct: 1159 PS--GPR--GPPGPVGPSGKDGANGIPGPIGPPGP---RGRSGETGPAGPPGNPGPPGPP 1211 Query: 829 GTPLRFEGP---IGQAGGGGFRFEGSPGLRF---EGSPGGLR 864 G P GP + G G R +G L++ + + GGLR Sbjct: 1212 GPP----GPGIDMSAFAGLGPREKGPDPLQYMRADQAAGGLR 1249 >gi|111118974 collagen, type II, alpha 1 isoform 2 precursor [Homo sapiens] Length = 1418 Score = 101 bits (252), Expect = 5e-21 Identities = 143/453 (31%), Positives = 178/453 (39%), Gaps = 70/453 (15%) Query: 754 GPSRPSVARDGPTKMIFEGP--NKLSPRIDGPP----TPASLRFDGSPGQMGGGGPLRFE 807 GP P AR P G ++ P +DG P GSPG+ G GP+ Sbjct: 198 GPPGPQGARGFPGTPGLPGVKGHRGYPGLDGAKGEAGAPGVKGESGSPGENGSPGPMGPR 257 Query: 808 GPQGQLGGGCPLRF------EGPPGPVGTPLRFEGPIGQAGGGGFRFEGSPGLRFEGSPG 861 G G+ G P +G PGP G P GP+G AGG G F G+PG + E P Sbjct: 258 GLPGERGRTGPAGAAGARGNDGQPGPAGPP----GPVGPAGGPG--FPGAPGAKGEAGPT 311 Query: 862 GLRFEGPGGQPVGGLRFEGHRGQPVGGLRFEGPHGQPVGGLRFDNPRGQPVGGLRFEGGH 921 G R GP G +G RG+P G G P NP + G + G Sbjct: 312 GAR--GPEGA-------QGPRGEP-------GTPGSPGPAGASGNPGTDGIPGAKGSAGA 355 Query: 922 GPSGAAIRFDGPHGQPG--GGIRFEGPLLQQG----VGMRFE-GPHGQ-SVAGLRFEGQH 973 A F GP G PG G GP Q G G + E GP G+ AG +G Sbjct: 356 PGIAGAPGFPGPRGPPGPQGATGPLGPKGQTGEPGIAGFKGEQGPKGEPGPAGP--QGAP 413 Query: 974 NQLGGNLRFEGPHGQPGVGIRFEGPLVQQG--GGMRF---EGPSVPGGGLRIEGPLGQGG 1028 G + G G+PG G+ GP ++G G F +G + P G GP G G Sbjct: 414 GPAGEEGK-RGARGEPG-GVGPIGPPGERGAPGNRGFPGQDGLAGPKGAPGERGPSGLAG 471 Query: 1029 PRFEGCHALRFDGQPGQPSLLPRFDGLHGQP---GPRFERTP-GQPGPQRFDGPPGQQVQ 1084 P+ A G+PG+P LP GL G+P GP+ + P G PG GPPG Q Sbjct: 472 PK----GANGDPGRPGEPG-LPGARGLTGRPGDAGPQGKVGPSGAPGEDGRPGPPGPQGA 526 Query: 1085 PRFDGVPQRFDGPQHQQASRFDIPLGLQGTR-FDNHPSQRLESVSFNQTGPYNDPPGNAF 1143 GV F GP+ G G + P R +TG PPG A Sbjct: 527 RGQPGV-MGFPGPKGANGEP-----GKAGEKGLPGAPGLRGLPGKDGETGAAG-PPGPAG 579 Query: 1144 NAPSQGLQFQRHEQIFDSPQGPNFNGPHGPGNQ 1176 A +G Q F GP GP G G + Sbjct: 580 PAGERGEQGAPGPSGFQGLPGP--PGPPGEGGK 610 Score = 95.9 bits (237), Expect = 3e-19 Identities = 132/405 (32%), Positives = 153/405 (37%), Gaps = 76/405 (18%) Query: 777 SPRIDGPPTPASLRFDGSPGQMGGGGPLRFEGPQGQLGGGCPLRFEGPPGPVGTPLRFEG 836 +P GPP P+ DG G G GP G G G P +G PG G P EG Sbjct: 844 NPGPPGPPGPSGK--DGPKGARGDSGPPGRAGEPGLQGPAGPPGEKGEPGDDG-PSGAEG 900 Query: 837 PIGQAGGGGFR-FEGSPGLRFE-GSPGGLRFEGPGGQP--VGGLRFEGHRGQP--VGGLR 890 P G G G R G PG R E G PG GP G+P G G RG P VG Sbjct: 901 PPGPQGLAGQRGIVGLPGQRGERGFPG---LPGPSGEPGKQGAPGASGDRGPPGPVGPPG 957 Query: 891 FEGPHGQP--VGGLRFDNPRGQPVGGLRFEGGHGPSGA--AIRFDGPHGQPG-------- 938 GP G+P G D P G+ G +G G +GA A GP G PG Sbjct: 958 LTGPAGEPGREGSPGADGPPGRD-GAAGVKGDRGETGAVGAPGAPGPPGSPGPAGPTGKQ 1016 Query: 939 ---GGIRFEGPLLQQG-VGMR-FEGPHG-QSVAGLRFEGQHNQLGGNLRFEGPHGQPGVG 992 G +GP+ G G R +GP G + G E L G+ F G G PG Sbjct: 1017 GDRGEAGAQGPMGPSGPAGARGIQGPQGPRGDKGEAGEPGERGLKGHRGFTGLQGLPGP- 1075 Query: 993 IRFEGPLVQQGG-------GMRFE----GPSVPGGGLRIEGPLGQGGPRFEGCHALRFDG 1041 GP QG G R GPS G I GP+G GPR Sbjct: 1076 ---PGPSGDQGASGPAGPSGPRGPPGPVGPSGKDGANGIPGPIGPPGPR----------- 1121 Query: 1042 QPGQPSLLPRFDGLHGQPGPRFERTPGQPGPQRFDGPPGQQV-QPRFDGVPQRFDGPQHQ 1100 G G+ GP PG PGP GPPG + F G+ R GP Sbjct: 1122 ------------GRSGETGP--AGPPGNPGPPGPPGPPGPGIDMSAFAGLGPREKGPDPL 1167 Query: 1101 QASRFDIPLGLQGTR-FDNHPSQRLESVSFNQTGPYNDPPGNAFN 1144 Q R D G G R D L+S++ NQ P G+ N Sbjct: 1168 QYMRADQAAG--GLRQHDAEVDATLKSLN-NQIESIRSPEGSRKN 1209 Score = 88.6 bits (218), Expect = 4e-17 Identities = 146/459 (31%), Positives = 165/459 (35%), Gaps = 104/459 (22%) Query: 750 PLFDGPSRPSVARDGPTKMIFEGPNKLSPRIDGPPTPASLRFDGSPGQMGGGGPLRFEGP 809 P DGP S GP GP P GPP G PG+ G G +G Sbjct: 656 PGTDGPKGAS----GPA-----GP----PGAQGPPG-----LQGMPGERGAAGIAGPKGD 697 Query: 810 QGQLG-----------GGCPLRFE-GPPGPVGT--PLRFEGPIGQAGGGGFRFEGSPGLR 855 +G +G GG L GPPGP G GP G AG G R G+PG R Sbjct: 698 RGDVGEKGPEGAPGKDGGRGLTGPIGPPGPAGANGEKGEVGPPGPAGSAGAR--GAPGER 755 Query: 856 FE-GSPGGLRFEGP---GGQPVGGLRFEGHRGQPVGGLRFEGPHGQPVGGLRFDNPRGQP 911 E G PG F GP GQP G +G GQ G GP G P G P G Sbjct: 756 GETGPPGPAGFAGPPGADGQP-GAKGEQGEAGQK-GDAGAPGPQG-PSGAPGPQGPTG-V 811 Query: 912 VGGLRFEGGHGPSGAAIRFDGPHGQ--PGGGIRFEGPLLQQGVGMRFEGPHGQS----VA 965 G G GP GA F G G+ P G GP GP G S Sbjct: 812 TGPKGARGAQGPPGAT-GFPGAAGRVGPPGSNGNPGP----------PGPPGPSGKDGPK 860 Query: 966 GLRFEGQHNQLGGNLRFEGPHGQPGVGIRFEGPLVQQGGGMRFEGPSVPGGGLRIEGPLG 1025 G R + G +GP G PG E G EGP P G G +G Sbjct: 861 GARGDSGPPGRAGEPGLQGPAGPPG-----EKGEPGDDGPSGAEGPPGPQGLAGQRGIVG 915 Query: 1026 QGGPRFEGCHALRFDGQPGQPSLLPRFDGLHGQPGPRFER-TPGQPGPQRFDGP---PGQ 1081 G R E F G PG PS P G G PG +R PG GP GP PG+ Sbjct: 916 LPGQRGE----RGFPGLPG-PSGEP---GKQGAPGASGDRGPPGPVGPPGLTGPAGEPGR 967 Query: 1082 QVQPRFDGVPQRFDGPQHQQASRFDIPLGLQGTRFDNHPSQRLESVSFNQTGPYNDPPGN 1141 + P DG P R D G++G R E+ + G PPG+ Sbjct: 968 EGSPGADGPPGR------------DGAAGVKG--------DRGETGAVGAPGA-PGPPGS 1006 Query: 1142 AFNAPSQGLQFQRHEQIFDSPQGPN-------FNGPHGP 1173 A G Q R E P GP+ GP GP Sbjct: 1007 PGPAGPTGKQGDRGEAGAQGPMGPSGPAGARGIQGPQGP 1045 Score = 87.4 bits (215), Expect = 1e-16 Identities = 137/432 (31%), Positives = 161/432 (37%), Gaps = 99/432 (22%) Query: 782 GPPTPASLRFD----GSPGQMGGGGPLRFEGPQGQLGGGCPLRFEGPPGPVGTPLRFEGP 837 GPP PA + G PG G G G +G+ G P F GPPG G P +G Sbjct: 723 GPPGPAGANGEKGEVGPPGPAGSAGARGAPGERGETGPPGPAGFAGPPGADGQP-GAKGE 781 Query: 838 IGQAGGGGFRFEGSPGLR----FEGSPGGLRFEGPGGQ-----PVGGLRFEGHRGQ--PV 886 G+AG G G+PG + G G GP G P G F G G+ P Sbjct: 782 QGEAGQKG--DAGAPGPQGPSGAPGPQGPTGVTGPKGARGAQGPPGATGFPGAAGRVGPP 839 Query: 887 GGLRFEGPHGQPVGGLRFDNPRGQPVGGLRFEGGHGPSGAAIR--FDGPHGQPG--GGIR 942 G GP G P G D P+G G GP G A GP G PG G Sbjct: 840 GSNGNPGPPGPP-GPSGKDGPKGA-------RGDSGPPGRAGEPGLQGPAGPPGEKGEPG 891 Query: 943 FEGPLLQQGVGMRFEGPHG-QSVAGLR-FEGQHNQLG--GNLRFEGPHGQPGVGIRFEGP 998 +GP EGP G Q +AG R G Q G G GP G+PG Sbjct: 892 DDGP-------SGAEGPPGPQGLAGQRGIVGLPGQRGERGFPGLPGPSGEPG-------- 936 Query: 999 LVQQG--GGMRFEGPSVPGGGLRIEGPLGQGGPRFEGCHALRFDGQPGQPSLLPRFDGLH 1056 +QG G GP P G + GP G+ P EG DG PG+ DG Sbjct: 937 --KQGAPGASGDRGPPGPVGPPGLTGPAGE--PGREGSPGA--DGPPGR-------DGAA 983 Query: 1057 GQPGPRFER----TPGQPGPQRFDGPPGQ--QVQPRFDGVPQRFDGPQHQQASRFDIPLG 1110 G G R E PG PGP GP G + R + Q GP +R G Sbjct: 984 GVKGDRGETGAVGAPGAPGPPGSPGPAGPTGKQGDRGEAGAQGPMGPSGPAGAR-----G 1038 Query: 1111 LQGTRFDNHPSQRLESVSFNQTGPYNDPPGNAFNAPSQGLQFQRHEQIFDSPQGPNFNGP 1170 +QG + GP D G A +GL+ R F QG GP Sbjct: 1039 IQGPQ-----------------GPRGD-KGEAGEPGERGLKGHRG---FTGLQG--LPGP 1075 Query: 1171 HGP-GNQSFSNP 1181 GP G+Q S P Sbjct: 1076 PGPSGDQGASGP 1087 Score = 84.0 bits (206), Expect = 1e-15 Identities = 118/380 (31%), Positives = 143/380 (37%), Gaps = 78/380 (20%) Query: 769 IFEGP-NKLSPRIDGPPTPASLR----FDGSPGQMGG---GGPLRFEGPQGQLG------ 814 + +GP + PR GPP PA F G+PG+ G GP+ GP G G Sbjct: 129 VMQGPMGPMGPR--GPPGPAGAPGPQGFQGNPGEPGEPGVSGPMGPRGPPGPPGKPGDDG 186 Query: 815 -GGCPLRF-----EGPPGPVGTP--------------LRFEGPIGQAGGGGFRFE-GSPG 853 G P + GP G G P +G G+AG G + E GSPG Sbjct: 187 EAGKPGKAGERGPPGPQGARGFPGTPGLPGVKGHRGYPGLDGAKGEAGAPGVKGESGSPG 246 Query: 854 LRFEGSPGGLRFEGPGGQ-----PVGGLRFEGHRGQPVGGLRFEGPHGQPVGGLRFDNPR 908 GSPG + G G+ P G G+ GQP G GP G P GG F Sbjct: 247 --ENGSPGPMGPRGLPGERGRTGPAGAAGARGNDGQP-GPAGPPGPVG-PAGGPGFPGAP 302 Query: 909 GQPVGGLRFEGGHGPSGAAIRFDGPHGQPGGGIRFEGPLLQQGVGMRFEGPHGQSVAGLR 968 G G G GP GA GP G+PG GP G P + G + Sbjct: 303 GAK-GEAGPTGARGPEGA----QGPRGEPGTP-GSPGPAGASG------NPGTDGIPGAK 350 Query: 969 FEGQHNQLGGNLRFEGPHGQPGVGIRFEGPLVQQG-----GGMRFEGPSVPGGGLRIEGP 1023 + G F GP G PG GPL +G G F+G P G GP Sbjct: 351 GSAGAPGIAGAPGFPGPRGPPGPQ-GATGPLGPKGQTGEPGIAGFKGEQGPKGEPGPAGP 409 Query: 1024 LGQGGPR-FEGCHALRFD-------GQPGQPSL-----LPRFDGLHGQPGPRFERTP-GQ 1069 G GP EG R + G PG+ P DGL G G ER P G Sbjct: 410 QGAPGPAGEEGKRGARGEPGGVGPIGPPGERGAPGNRGFPGQDGLAGPKGAPGERGPSGL 469 Query: 1070 PGPQRFDGPPGQQVQPRFDG 1089 GP+ +G PG+ +P G Sbjct: 470 AGPKGANGDPGRPGEPGLPG 489 Score = 80.5 bits (197), Expect = 1e-14 Identities = 144/450 (32%), Positives = 168/450 (37%), Gaps = 92/450 (20%) Query: 772 GPNKLSPRIDGPPTPASLRFD-GSPGQMGGGGPLRFEGPQGQLGGGCPLRFEGPPGPVGT 830 GP K P GP R D G G+ G GP +G G G P GPPGP G Sbjct: 48 GP-KGPPGPQGPAGEQGPRGDRGDKGEKGAPGPRGRDGEPGTPGNPGPPGPPGPPGPPGL 106 Query: 831 -----------------------------PLRFEGPIGQAGGGGFR-FEGSPGLRFE-GS 859 P+ GP G AG G + F+G+PG E G Sbjct: 107 GGNFAAQMAGGFDEKAGGAQLGVMQGPMGPMGPRGPPGPAGAPGPQGFQGNPGEPGEPGV 166 Query: 860 PGGLRFEGPGGQPVGGLRFEGHRGQPVGGLRFEGPHGQPVGGLRFDNPRGQP-VGGLR-- 916 G + GP G P G +G G+P G GP G P G F G P V G R Sbjct: 167 SGPMGPRGPPGPP-GKPGDDGEAGKP-GKAGERGPPG-PQGARGFPGTPGLPGVKGHRGY 223 Query: 917 --FEGGHGPSGAAIRFDGPHGQPGGGIRFEGPLLQQGV-GMRFE-GPHGQSVAGLRFEGQ 972 +G G +GA G G PG GP+ +G+ G R GP G AG R Sbjct: 224 PGLDGAKGEAGAP-GVKGESGSPGEN-GSPGPMGPRGLPGERGRTGPAG--AAGAR---- 275 Query: 973 HNQLGGNLRFEGPHGQPGVGIRFEGPLVQQGGGMRFEGPSVPG--GGLRIEGPLGQGGPR 1030 GN GP G P GP+ G GP PG G GP G GP Sbjct: 276 -----GNDGQPGPAGPP-------GPVGPAG------GPGFPGAPGAKGEAGPTGARGP- 316 Query: 1031 FEGCHALRFDGQPGQPSLLPRFDGLHGQPGPRFERTPGQPGPQRFDGPPGQQVQPRFDGV 1090 EG R G+PG P P G G PG T G PG + G PG P F G Sbjct: 317 -EGAQGPR--GEPGTPG-SPGPAGASGNPG-----TDGIPGAKGSAGAPGIAGAPGFPG- 366 Query: 1091 PQRFDGPQHQQASRFDIPLGLQG-TRFDNHPSQRLESVSFNQTGPYNDPPGNAFNAPSQG 1149 P+ GPQ PLG +G T + E + GP P G A +G Sbjct: 367 PRGPPGPQGATG-----PLGPKGQTGEPGIAGFKGEQGPKGEPGPAG-PQGAPGPAGEEG 420 Query: 1150 LQFQRHEQIFDSPQGPNFNGPHG-PGNQSF 1178 + R E P GP G G PGN+ F Sbjct: 421 KRGARGEPGGVGPIGP--PGERGAPGNRGF 448 Score = 39.3 bits (90), Expect = 0.030 Identities = 52/162 (32%), Positives = 68/162 (41%), Gaps = 30/162 (18%) Query: 713 LKRPRYEDSDKPFVDSPASRFAGLDTNQRLTALAEDRPLFDGPSRPSVARDGPTKMIFEG 772 ++ P+ DK P R GL ++ T L + P GPS A GP G Sbjct: 1039 IQGPQGPRGDKGEAGEPGER--GLKGHRGFTGL-QGLPGPPGPSGDQGA-SGPA-----G 1089 Query: 773 PNKLSPRIDGPPTPASLR----FDGSPGQMGGGGPLRFEGPQGQLGGGCPLRFEGPPGPV 828 P+ PR GPP P +G PG +G GP G G+ G P GPPGP Sbjct: 1090 PS--GPR--GPPGPVGPSGKDGANGIPGPIGPPGP---RGRSGETGPAGPPGNPGPPGPP 1142 Query: 829 GTPLRFEGP---IGQAGGGGFRFEGSPGLRF---EGSPGGLR 864 G P GP + G G R +G L++ + + GGLR Sbjct: 1143 GPP----GPGIDMSAFAGLGPREKGPDPLQYMRADQAAGGLR 1180 Score = 38.5 bits (88), Expect = 0.051 Identities = 44/148 (29%), Positives = 52/148 (35%), Gaps = 25/148 (16%) Query: 1041 GQPGQPSLLPRFDGLHGQPGPR---FERTP----------GQPGPQRFDGPPGQQVQPRF 1087 GQ G+P + G G PGP+ E+ P G PGP+ DG PG P Sbjct: 35 GQKGEPGDIKDIVGPKGPPGPQGPAGEQGPRGDRGDKGEKGAPGPRGRDGEPGTPGNPGP 94 Query: 1088 DGVPQRFDGPQHQQASRFDIPLGLQGTRFDNHPSQRLESVSFNQTGPY--NDPPGNAFNA 1145 G P GP + + G FD V GP PPG A Sbjct: 95 PGPP----GPPGPPGLGGNFAAQMAG-GFDEKAGGAQLGVMQGPMGPMGPRGPPGPAGAP 149 Query: 1146 PSQGLQFQRHEQIFDSPQGPNFNGPHGP 1173 QG Q E P P +GP GP Sbjct: 150 GPQGFQGNPGE-----PGEPGVSGPMGP 172 >gi|111118972 collagen, type XI, alpha 2 isoform 2 preproprotein [Homo sapiens] Length = 1650 Score = 101 bits (251), Expect = 6e-21 Identities = 133/376 (35%), Positives = 155/376 (41%), Gaps = 75/376 (19%) Query: 753 DGPSRPSVARDGPTKMIFEGPNKLSPRIDGPPTPASLRFDGSPGQMGGGGPLRFEG---- 808 DGP P R P +GPN P GPP P DG PG G G + F+G Sbjct: 781 DGPHGPPGERGLPGP---QGPNGF-PGPKGPPGPPGK--DGLPGHPGQRGEVGFQGKTGP 834 Query: 809 --------PQGQLGGGCPLRFEGPPGPVGTPLRFEGPIGQAGGGGFRFE-GSPGLRFEGS 859 PQG G P+ G PGP G P +G G AG G + + G PG + Sbjct: 835 PGPPGVVGPQGAAGETGPMGERGHPGPPGPPGE-QGLPGTAGKEGTKGDPGPPGAPGKDG 893 Query: 860 PGGLR-FEGPGGQP--VGGLRFEGHRGQPVGGLRFEGPHGQPVGGLRFDNPRGQPVGGLR 916 P GLR F G G P GG +G+ G P G GP G P G R G P+G Sbjct: 894 PAGLRGFPGERGLPGTAGGPGLKGNEG-PSGP---PGPAGSP--GERGAAGSGGPIGPPG 947 Query: 917 FEGGHGPSGAAIRFDGPHGQPG--GGIRFEGPLLQQGV--GMRFEGPHG-QSVAGLRFEG 971 G GP GAA G G PG G I GP + GV + GP G VAG +G Sbjct: 948 RPGPQGPPGAA----GEKGVPGEKGPI---GPTGRDGVQGPVGLPGPAGPPGVAG--EDG 998 Query: 972 QHNQLG-----GNLRFEGPHGQPGVGIRFEGPL--VQQGGGMRFEGPSVPGGGLRIEGPL 1024 ++G G +G HG PG GP+ V Q G +G PG GP Sbjct: 999 DKGEVGDPGQKGTKGNKGEHGPPGP----PGPIGPVGQPGAAGADGE--PGA----RGPQ 1048 Query: 1025 GQGGPR-FEGCHALRFDGQPGQPSLLPRFDGLHGQPGPRFER-TPGQPGPQRFDGPPGQQ 1082 G G + EG F+G PG GL G PGP E+ G GP GPPG Sbjct: 1049 GHFGAKGDEGTRG--FNGPPGP-------IGLQGLPGPSGEKGETGDVGPMGPPGPPG-- 1097 Query: 1083 VQPRFDGVPQRFDGPQ 1098 PR P DGPQ Sbjct: 1098 --PRGPAGPNGADGPQ 1111 Score = 94.4 bits (233), Expect = 8e-19 Identities = 136/417 (32%), Positives = 161/417 (38%), Gaps = 93/417 (22%) Query: 773 PNKLSPR-IDGPPTPASLRFDGSPGQMGGGGPLRFEGPQGQLGGGCPLRFEGPPGPVGTP 831 P + PR + GP P + G PG G GP +GP+G LG P GPPG GTP Sbjct: 517 PGESGPRGLLGPKGPPGI--PGPPGVRGMDGP---QGPKGSLG---PQGEPGPPGQQGTP 568 Query: 832 --LRFEGPIGQAGGGGFRF-EGSPGLRFEGSPGGLRFEGPGGQPVGGLRFEGHRGQPVGG 888 GP G G G + +G PGL G PG +GP G P G G P G Sbjct: 569 GTQGLPGPQGAIGPHGEKGPQGKPGL--PGMPGS---DGPPGHP-------GKEGPP-GT 615 Query: 889 LRFEGPHGQPVGGLRFDNPRG-QPVGGLRFEGGHGPSGAAIRFDGPHGQPG--GGIRFEG 945 +GP G P G L + PRG + V G+R GH G G PG G I +G Sbjct: 616 KGNQGPSG-PQGPLGYPGPRGVKGVDGIRGLKGHKGE------KGEDGFPGFKGDIGVKG 668 Query: 946 PLLQQGV-GMRF----EGPHGQS-------VAGLRFEGQHNQLG-----GNLRFEGPHGQ 988 + GV G R EGP G++ GL G+ +LG G +GP G Sbjct: 669 DRGEVGVPGSRGEDGPEGPKGRTGPTGDPGPPGLM--GEKGKLGVPGLPGYPGRQGPKGS 726 Query: 989 PGVGIRFEGPLVQQGGGMRFEGPSVPGGGLRIEGPLGQGGPRFEGCHALRFDGQPGQPSL 1048 G F G ++ G G S P G GP GQ GPR A G G Sbjct: 727 LGFP-GFPGASGEK-GARGLSGKSGPRGERGPTGPRGQRGPR----GATGKSGAKGTSG- 779 Query: 1049 LPRFDGLHGQPGPRFERTPGQPGPQRFDGPPGQQVQPRFDGVPQRFDGPQHQQASRFDIP 1108 DG HG PG R PG GP F GP G P DG+P Sbjct: 780 ---GDGPHGPPGER--GLPGPQGPNGFPGPKGPPGPPGKDGLP----------------- 817 Query: 1109 LGLQGTRFDNHPSQRLESVSFNQTGPYNDPPGNAFNAPSQGLQFQRHEQIFDSPQGP 1165 HP QR E +TGP PPG + G E+ P GP Sbjct: 818 ---------GHPGQRGEVGFQGKTGP-PGPPGVVGPQGAAGETGPMGERGHPGPPGP 864 Score = 91.3 bits (225), Expect = 7e-18 Identities = 114/341 (33%), Positives = 137/341 (40%), Gaps = 43/341 (12%) Query: 783 PPTPASLRFDGSPGQMGGGGPLRFEGPQGQLGGGCPLRFEGPPGPVGTP--LRFEGPIGQ 840 P P DG PG G GP +G QG G PL + GP G G +G G+ Sbjct: 592 PGLPGMPGSDGPPGHPGKEGPPGTKGNQGPSGPQGPLGYPGPRGVKGVDGIRGLKGHKGE 651 Query: 841 AGGGGFR-FEGSPGLRFE----GSPGGLRFEGPGGQPVGGLRFEGHRGQPVGGLRFEGPH 895 G GF F+G G++ + G PG +GP G P G G G P G + +G Sbjct: 652 KGEDGFPGFKGDIGVKGDRGEVGVPGSRGEDGPEG-PKGRTGPTGDPGPP-GLMGEKGKL 709 Query: 896 GQPVGGLRFDNPRGQPVGGLRFEGGHGPSGAAIRFDGPHGQPGGGIRFEGPLLQQGVGMR 955 G P GL R P G L F G G SG G G G GP ++G Sbjct: 710 GVP--GLPGYPGRQGPKGSLGFPGFPGASGEK----GARGLSGKS----GPRGERGP--- 756 Query: 956 FEGPHGQSVAGLRFEGQHNQLGGNLRFEGPHGQPGVGIRFEGPLVQQGGGMRFEGPSVPG 1015 GP GQ G R + G +GPHG PG E L G F GP P Sbjct: 757 -TGPRGQR--GPRGATGKSGAKGTSGGDGPHGPPG-----ERGLPGPQGPNGFPGPKGPP 808 Query: 1016 GGLRIEGPLGQGGPRFEGCHALRFDGQ---PGQPSLLPRFDGLHGQPGPRFERTPGQPGP 1072 G +G G G R E + F G+ PG P ++ G G+ GP ER G PGP Sbjct: 809 GPPGKDGLPGHPGQRGE----VGFQGKTGPPGPPGVVGP-QGAAGETGPMGER--GHPGP 861 Query: 1073 QRFDGPPGQQVQPRFDGVPQRFDGPQHQQASRFDIPLGLQG 1113 GPPG+Q P G P A D P GL+G Sbjct: 862 P---GPPGEQGLPGTAGKEGTKGDPGPPGAPGKDGPAGLRG 899 Score = 87.0 bits (214), Expect = 1e-16 Identities = 119/390 (30%), Positives = 149/390 (38%), Gaps = 79/390 (20%) Query: 762 RDGPTKMI-FEGPNKLSPRIDGPPTPASLRFDGSPGQMGGGGPLRFEGPQGQLGGGCPLR 820 +DGP + F G L GP G+ G G GP G +G G G P+ Sbjct: 891 KDGPAGLRGFPGERGLPGTAGGPG------LKGNEGPSGPPGPAGSPGERGAAGSGGPIG 944 Query: 821 FEGPPGPVGTPLRF--------EGPIGQAGGGGFRF-------EGSPGLRFE-------G 858 G PGP G P +GPIG G G + G PG+ E G Sbjct: 945 PPGRPGPQGPPGAAGEKGVPGEKGPIGPTGRDGVQGPVGLPGPAGPPGVAGEDGDKGEVG 1004 Query: 859 SPGGLRFEGPGGQ-----------PVGGLRFEGHRGQP--------------VGGLRFEG 893 PG +G G+ PVG G G+P G F G Sbjct: 1005 DPGQKGTKGNKGEHGPPGPPGPIGPVGQPGAAGADGEPGARGPQGHFGAKGDEGTRGFNG 1064 Query: 894 PHGQPVGGLRFDNPRGQ-----PVGGLRFEGGHGPSGAA--IRFDGPHGQPGGGIRFEGP 946 P G P+G P G+ VG + G GP G A DGP G P GG+ GP Sbjct: 1065 PPG-PIGLQGLPGPSGEKGETGDVGPMGPPGPPGPRGPAGPNGADGPQGPP-GGVGNLGP 1122 Query: 947 LLQQGVGMRFEGPHGQSVAGLRFEGQHNQLGGNLRFEGPHGQPGVGIRFEGPLVQQG--G 1004 ++G P Q G++ G + G +G GQPG GP +G G Sbjct: 1123 PGEKGEPGESGSPGIQGEPGVK--GPRGERGE----KGESGQPGE----PGPPGPKGPTG 1172 Query: 1005 GMRFEGPSVPGGGLRIEGPLGQGGPR-FEGCHALR-FDGQPGQPSLLPRFDGLHGQPGPR 1062 +G P G GP G+GGPR +G R DG+PGQP P G +G PGP Sbjct: 1173 DDGPKGNPGPVGFPGDPGPPGEGGPRGQDGAKGDRGEDGEPGQPG-SPGPTGENGPPGPL 1231 Query: 1063 FERTP-GQPGPQRFDGPPGQQVQPRFDGVP 1091 +R P G PG + G G + P G P Sbjct: 1232 GKRGPAGSPGSEGRQGGKGAKGDPGAIGAP 1261 Score = 81.3 bits (199), Expect = 7e-15 Identities = 135/453 (29%), Positives = 166/453 (36%), Gaps = 103/453 (22%) Query: 703 QRSPFNDRFPLKRPRYEDSDKPFVDSPASRFAGLDTNQRLTALAE----DRPLFDGPSRP 758 QRSP L RP+ ++ D + + L L E R L P Sbjct: 245 QRSPQQQPSRLHRPQNQEPQSQ--DPTPGEEEEILESSLLPPLEEAAHGPRGLKGEKGEP 302 Query: 759 SVARDGPTKMIFEGPNKLSPRIDGPPTPASLRFDGSPGQMGGGGPLRFEGPQGQLGGGCP 818 +V G M+ EGP GP PA L G PG G GP+ G +G G Sbjct: 303 AVLEPG---MLVEGP-------PGPEGPAGLI--GPPGIQGNPGPVGDPGERGPPGRAGL 350 Query: 819 LRFEGPPGPVGTPLRFEGPIGQAGGGGFRFEGSPGLRFEG--SPGGLRFEGPGGQPVGGL 876 +G PGP GT L G GG + + + L GP G Sbjct: 351 PGSDGAPGPPGTSLMLPFRFGSGGGDKGPVVAAQEAQAQAILQQARLALRGPPGP----- 405 Query: 877 RFEGHRGQPVGGLRFEGPHGQPVG-GLRFDNPRGQPVGGLRFEGGHGPSGAAIR-----F 930 G+ G+P GP GQP GL+ ++ P G +G GP G A R Sbjct: 406 --MGYTGRP-------GPLGQPGSPGLKGESGDLGPQGPRGPQGLTGPPGKAGRRGRAGA 456 Query: 931 DGPHGQPG-----GGIRFEG-PLLQQGVGMR-------FEGPHGQSVAGLRFEGQHNQLG 977 DG G PG G F+G P L G R GP G+ G R G ++G Sbjct: 457 DGARGMPGDPGVKGDRGFDGLPGLPGEKGHRGDTGAQGLPGPPGED--GER--GDDGEIG 512 Query: 978 --------GNLRFEGPHGQPGVGIRFEGPLVQQGGGMRFEGPSVPGGGLRIEGPLGQGGP 1029 G GP G PG+ GP +G +GP P G L GP G+ GP Sbjct: 513 PRGLPGESGPRGLLGPKGPPGI----PGPPGVRG----MDGPQGPKGSL---GPQGEPGP 561 Query: 1030 RFEGCHALRFDGQPGQPSL--LPRFDGL---HGQPGPRFERTPGQPGPQRFDGPPGQQVQ 1084 GQ G P LP G HG+ GP + PG PG DGPPG Sbjct: 562 ----------PGQQGTPGTQGLPGPQGAIGPHGEKGP--QGKPGLPGMPGSDGPPG---H 606 Query: 1085 PRFDGVP--QRFDGPQHQQASRFDIPLGLQGTR 1115 P +G P + GP Q PLG G R Sbjct: 607 PGKEGPPGTKGNQGPSGPQG-----PLGYPGPR 634 Score = 81.3 bits (199), Expect = 7e-15 Identities = 102/319 (31%), Positives = 123/319 (38%), Gaps = 89/319 (27%) Query: 781 DGPP-TPASLRFDGSPGQMGGGGPLRFEGPQG---------QLGGGCPLRFEGPPGPVGT 830 DGP P + F G PG G GGP +G +G Q G P GPPGP+G Sbjct: 1174 DGPKGNPGPVGFPGDPGPPGEGGPRGQDGAKGDRGEDGEPGQPGSPGPTGENGPPGPLGK 1233 Query: 831 PLRFEGPIGQAGG----GGFRFEGSPGLRFEGSPGGLRFEGPGGQPVGGLRFEGHRGQPV 886 GP G G GG +G PG G+PG GP G P G +G RG P Sbjct: 1234 ----RGPAGSPGSEGRQGGKGAKGDPGA--IGAPGKTGPVGPAG-PAGKPGPDGLRGLP- 1285 Query: 887 GGLRFEGPHGQPVGGLRFDNPRGQPVGGLRFEGGHGPSGAAIRFDGPHGQPGGGIRFEGP 946 G + G G+P G P G PVG G G +GA G G PG Sbjct: 1286 GSV---GQQGRP-GATGQAGPPG-PVGPPGLPGLRGDAGA----KGEKGHPG-------- 1328 Query: 947 LLQQGVGMRFEGPHGQSVAGLRFEGQHNQLGGNLRFEGPHGQPGVGIRFEGPLVQQGGGM 1006 +G+ GP G+ +G+ G GP G PG Q G M Sbjct: 1329 ----LIGL--IGPPGE-------QGEKGDRG----LPGPQGSPG-----------QKGEM 1360 Query: 1007 RFEGPSVPGGGLRIEGPLGQGGPRFEGCHALRFDGQPGQPSLLPRFDGLHGQPGPRFERT 1066 G S GP+G GGP G PG P+ G G GP+ E+ Sbjct: 1361 GIPGAS---------GPIGPGGP----------PGLPG-PAGPKGAKGATGPGGPKGEK- 1399 Query: 1067 PGQPGPQRFDGPPGQQVQP 1085 G GP GPPG+ +QP Sbjct: 1400 -GVQGPPGHPGPPGEVIQP 1417 Score = 78.6 bits (192), Expect = 4e-14 Identities = 147/486 (30%), Positives = 167/486 (34%), Gaps = 113/486 (23%) Query: 759 SVARDGPTKMIFEGPNKLSPRIDGPPTPASLRFDGSPGQMGGGGPLRFEGPQGQL----- 813 S DGP EGP + P P + G G G G +GP+G L Sbjct: 678 SRGEDGP-----EGPKGRTGPTGDPGPPGLMGEKGKLGVPGLPGYPGRQGPKGSLGFPGF 732 Query: 814 -------------GGGCPLRFEGPPGPVGTPLRFEGPIGQAG-------GGGFRFEGSPG 853 G P GP GP G GP G G GG G PG Sbjct: 733 PGASGEKGARGLSGKSGPRGERGPTGPRGQ----RGPRGATGKSGAKGTSGGDGPHGPPG 788 Query: 854 LR-FEGSPGGLRFEGPGGQ--PVGGLRFEGHRGQ-----------PVGGLRFEGPHGQ-- 897 R G G F GP G P G GH GQ P G GP G Sbjct: 789 ERGLPGPQGPNGFPGPKGPPGPPGKDGLPGHPGQRGEVGFQGKTGPPGPPGVVGPQGAAG 848 Query: 898 ---PVGGLRFDNPRGQP--------VGGLRFEGGHGPSGAAIRFDGPHGQPGGGIRFEGP 946 P+G P G P G +G GP GA + DGP G G P Sbjct: 849 ETGPMGERGHPGPPGPPGEQGLPGTAGKEGTKGDPGPPGAPGK-DGPAGLRGFPGERGLP 907 Query: 947 LLQQGVGMR-FEGPHG-QSVAGLRFEGQHNQLGGNLRFEGPHGQPGVGIRFEGPLVQQG- 1003 G G++ EGP G AG E GG + GP G+PG +GP G Sbjct: 908 GTAGGPGLKGNEGPSGPPGPAGSPGERGAAGSGGPI---GPPGRPGP----QGPPGAAGE 960 Query: 1004 -GGMRFEGPSVPGGGLRIEGPLGQGGPRF-EGCHALRFD----GQPGQPSLLPRFDGLHG 1057 G +GP P G ++GP+G GP G D G PGQ G HG Sbjct: 961 KGVPGEKGPIGPTGRDGVQGPVGLPGPAGPPGVAGEDGDKGEVGDPGQKGTKGN-KGEHG 1019 Query: 1058 QPGPRFERTP-GQPGPQRFDGPPGQQ-VQPRF----DGVPQRFDGPQHQQASRFDIPLGL 1111 PGP P GQPG DG PG + Q F D + F+GP P+GL Sbjct: 1020 PPGPPGPIGPVGQPGAAGADGEPGARGPQGHFGAKGDEGTRGFNGPPG--------PIGL 1071 Query: 1112 QGTRFDNHPSQRLESVSFNQTGPYN--DPPGNAFNAPSQGLQFQRHEQIFDSPQGPNFNG 1169 QG P E GP PPG A G D PQGP Sbjct: 1072 QGL-----PGPSGEKGETGDVGPMGPPGPPGPRGPAGPNGA---------DGPQGP---- 1113 Query: 1170 PHGPGN 1175 P G GN Sbjct: 1114 PGGVGN 1119 Score = 33.5 bits (75), Expect = 1.6 Identities = 32/88 (36%), Positives = 36/88 (40%), Gaps = 9/88 (10%) Query: 782 GPPTPASLRFDGSP-GQMGGGGPLRFEGPQGQLGGGCPLRFEGPPGPVGTPLRFEGP-IG 839 GP P L P G G GP GP+G+ G P GPPG V PL + P Sbjct: 1370 GPGGPPGLPGPAGPKGAKGATGP---GGPKGEKGVQGPPGHPGPPGEVIQPLPIQMPKKT 1426 Query: 840 QAGGGGFRF----EGSPGLRFEGSPGGL 863 + G R E P GSPGGL Sbjct: 1427 RRSVDGSRLMQEDEAIPTGGAPGSPGGL 1454 >gi|111118968 collagen, type XI, alpha 2 isoform 3 preproprotein [Homo sapiens] Length = 1629 Score = 101 bits (251), Expect = 6e-21 Identities = 133/376 (35%), Positives = 155/376 (41%), Gaps = 75/376 (19%) Query: 753 DGPSRPSVARDGPTKMIFEGPNKLSPRIDGPPTPASLRFDGSPGQMGGGGPLRFEG---- 808 DGP P R P +GPN P GPP P DG PG G G + F+G Sbjct: 760 DGPHGPPGERGLPGP---QGPNGF-PGPKGPPGPPGK--DGLPGHPGQRGEVGFQGKTGP 813 Query: 809 --------PQGQLGGGCPLRFEGPPGPVGTPLRFEGPIGQAGGGGFRFE-GSPGLRFEGS 859 PQG G P+ G PGP G P +G G AG G + + G PG + Sbjct: 814 PGPPGVVGPQGAAGETGPMGERGHPGPPGPPGE-QGLPGTAGKEGTKGDPGPPGAPGKDG 872 Query: 860 PGGLR-FEGPGGQP--VGGLRFEGHRGQPVGGLRFEGPHGQPVGGLRFDNPRGQPVGGLR 916 P GLR F G G P GG +G+ G P G GP G P G R G P+G Sbjct: 873 PAGLRGFPGERGLPGTAGGPGLKGNEG-PSGP---PGPAGSP--GERGAAGSGGPIGPPG 926 Query: 917 FEGGHGPSGAAIRFDGPHGQPG--GGIRFEGPLLQQGV--GMRFEGPHG-QSVAGLRFEG 971 G GP GAA G G PG G I GP + GV + GP G VAG +G Sbjct: 927 RPGPQGPPGAA----GEKGVPGEKGPI---GPTGRDGVQGPVGLPGPAGPPGVAG--EDG 977 Query: 972 QHNQLG-----GNLRFEGPHGQPGVGIRFEGPL--VQQGGGMRFEGPSVPGGGLRIEGPL 1024 ++G G +G HG PG GP+ V Q G +G PG GP Sbjct: 978 DKGEVGDPGQKGTKGNKGEHGPPGP----PGPIGPVGQPGAAGADGE--PGA----RGPQ 1027 Query: 1025 GQGGPR-FEGCHALRFDGQPGQPSLLPRFDGLHGQPGPRFER-TPGQPGPQRFDGPPGQQ 1082 G G + EG F+G PG GL G PGP E+ G GP GPPG Sbjct: 1028 GHFGAKGDEGTRG--FNGPPGP-------IGLQGLPGPSGEKGETGDVGPMGPPGPPG-- 1076 Query: 1083 VQPRFDGVPQRFDGPQ 1098 PR P DGPQ Sbjct: 1077 --PRGPAGPNGADGPQ 1090 Score = 94.4 bits (233), Expect = 8e-19 Identities = 136/417 (32%), Positives = 161/417 (38%), Gaps = 93/417 (22%) Query: 773 PNKLSPR-IDGPPTPASLRFDGSPGQMGGGGPLRFEGPQGQLGGGCPLRFEGPPGPVGTP 831 P + PR + GP P + G PG G GP +GP+G LG P GPPG GTP Sbjct: 496 PGESGPRGLLGPKGPPGI--PGPPGVRGMDGP---QGPKGSLG---PQGEPGPPGQQGTP 547 Query: 832 --LRFEGPIGQAGGGGFRF-EGSPGLRFEGSPGGLRFEGPGGQPVGGLRFEGHRGQPVGG 888 GP G G G + +G PGL G PG +GP G P G G P G Sbjct: 548 GTQGLPGPQGAIGPHGEKGPQGKPGL--PGMPGS---DGPPGHP-------GKEGPP-GT 594 Query: 889 LRFEGPHGQPVGGLRFDNPRG-QPVGGLRFEGGHGPSGAAIRFDGPHGQPG--GGIRFEG 945 +GP G P G L + PRG + V G+R GH G G PG G I +G Sbjct: 595 KGNQGPSG-PQGPLGYPGPRGVKGVDGIRGLKGHKGE------KGEDGFPGFKGDIGVKG 647 Query: 946 PLLQQGV-GMRF----EGPHGQS-------VAGLRFEGQHNQLG-----GNLRFEGPHGQ 988 + GV G R EGP G++ GL G+ +LG G +GP G Sbjct: 648 DRGEVGVPGSRGEDGPEGPKGRTGPTGDPGPPGLM--GEKGKLGVPGLPGYPGRQGPKGS 705 Query: 989 PGVGIRFEGPLVQQGGGMRFEGPSVPGGGLRIEGPLGQGGPRFEGCHALRFDGQPGQPSL 1048 G F G ++ G G S P G GP GQ GPR A G G Sbjct: 706 LGFP-GFPGASGEK-GARGLSGKSGPRGERGPTGPRGQRGPR----GATGKSGAKGTSG- 758 Query: 1049 LPRFDGLHGQPGPRFERTPGQPGPQRFDGPPGQQVQPRFDGVPQRFDGPQHQQASRFDIP 1108 DG HG PG R PG GP F GP G P DG+P Sbjct: 759 ---GDGPHGPPGER--GLPGPQGPNGFPGPKGPPGPPGKDGLP----------------- 796 Query: 1109 LGLQGTRFDNHPSQRLESVSFNQTGPYNDPPGNAFNAPSQGLQFQRHEQIFDSPQGP 1165 HP QR E +TGP PPG + G E+ P GP Sbjct: 797 ---------GHPGQRGEVGFQGKTGP-PGPPGVVGPQGAAGETGPMGERGHPGPPGP 843 Score = 91.3 bits (225), Expect = 7e-18 Identities = 114/341 (33%), Positives = 137/341 (40%), Gaps = 43/341 (12%) Query: 783 PPTPASLRFDGSPGQMGGGGPLRFEGPQGQLGGGCPLRFEGPPGPVGTP--LRFEGPIGQ 840 P P DG PG G GP +G QG G PL + GP G G +G G+ Sbjct: 571 PGLPGMPGSDGPPGHPGKEGPPGTKGNQGPSGPQGPLGYPGPRGVKGVDGIRGLKGHKGE 630 Query: 841 AGGGGFR-FEGSPGLRFE----GSPGGLRFEGPGGQPVGGLRFEGHRGQPVGGLRFEGPH 895 G GF F+G G++ + G PG +GP G P G G G P G + +G Sbjct: 631 KGEDGFPGFKGDIGVKGDRGEVGVPGSRGEDGPEG-PKGRTGPTGDPGPP-GLMGEKGKL 688 Query: 896 GQPVGGLRFDNPRGQPVGGLRFEGGHGPSGAAIRFDGPHGQPGGGIRFEGPLLQQGVGMR 955 G P GL R P G L F G G SG G G G GP ++G Sbjct: 689 GVP--GLPGYPGRQGPKGSLGFPGFPGASGEK----GARGLSGKS----GPRGERGP--- 735 Query: 956 FEGPHGQSVAGLRFEGQHNQLGGNLRFEGPHGQPGVGIRFEGPLVQQGGGMRFEGPSVPG 1015 GP GQ G R + G +GPHG PG E L G F GP P Sbjct: 736 -TGPRGQR--GPRGATGKSGAKGTSGGDGPHGPPG-----ERGLPGPQGPNGFPGPKGPP 787 Query: 1016 GGLRIEGPLGQGGPRFEGCHALRFDGQ---PGQPSLLPRFDGLHGQPGPRFERTPGQPGP 1072 G +G G G R E + F G+ PG P ++ G G+ GP ER G PGP Sbjct: 788 GPPGKDGLPGHPGQRGE----VGFQGKTGPPGPPGVVGP-QGAAGETGPMGER--GHPGP 840 Query: 1073 QRFDGPPGQQVQPRFDGVPQRFDGPQHQQASRFDIPLGLQG 1113 GPPG+Q P G P A D P GL+G Sbjct: 841 P---GPPGEQGLPGTAGKEGTKGDPGPPGAPGKDGPAGLRG 878 Score = 87.0 bits (214), Expect = 1e-16 Identities = 119/390 (30%), Positives = 149/390 (38%), Gaps = 79/390 (20%) Query: 762 RDGPTKMI-FEGPNKLSPRIDGPPTPASLRFDGSPGQMGGGGPLRFEGPQGQLGGGCPLR 820 +DGP + F G L GP G+ G G GP G +G G G P+ Sbjct: 870 KDGPAGLRGFPGERGLPGTAGGPG------LKGNEGPSGPPGPAGSPGERGAAGSGGPIG 923 Query: 821 FEGPPGPVGTPLRF--------EGPIGQAGGGGFRF-------EGSPGLRFE-------G 858 G PGP G P +GPIG G G + G PG+ E G Sbjct: 924 PPGRPGPQGPPGAAGEKGVPGEKGPIGPTGRDGVQGPVGLPGPAGPPGVAGEDGDKGEVG 983 Query: 859 SPGGLRFEGPGGQ-----------PVGGLRFEGHRGQP--------------VGGLRFEG 893 PG +G G+ PVG G G+P G F G Sbjct: 984 DPGQKGTKGNKGEHGPPGPPGPIGPVGQPGAAGADGEPGARGPQGHFGAKGDEGTRGFNG 1043 Query: 894 PHGQPVGGLRFDNPRGQ-----PVGGLRFEGGHGPSGAA--IRFDGPHGQPGGGIRFEGP 946 P G P+G P G+ VG + G GP G A DGP G P GG+ GP Sbjct: 1044 PPG-PIGLQGLPGPSGEKGETGDVGPMGPPGPPGPRGPAGPNGADGPQGPP-GGVGNLGP 1101 Query: 947 LLQQGVGMRFEGPHGQSVAGLRFEGQHNQLGGNLRFEGPHGQPGVGIRFEGPLVQQG--G 1004 ++G P Q G++ G + G +G GQPG GP +G G Sbjct: 1102 PGEKGEPGESGSPGIQGEPGVK--GPRGERGE----KGESGQPGE----PGPPGPKGPTG 1151 Query: 1005 GMRFEGPSVPGGGLRIEGPLGQGGPR-FEGCHALR-FDGQPGQPSLLPRFDGLHGQPGPR 1062 +G P G GP G+GGPR +G R DG+PGQP P G +G PGP Sbjct: 1152 DDGPKGNPGPVGFPGDPGPPGEGGPRGQDGAKGDRGEDGEPGQPG-SPGPTGENGPPGPL 1210 Query: 1063 FERTP-GQPGPQRFDGPPGQQVQPRFDGVP 1091 +R P G PG + G G + P G P Sbjct: 1211 GKRGPAGSPGSEGRQGGKGAKGDPGAIGAP 1240 Score = 82.0 bits (201), Expect = 4e-15 Identities = 133/449 (29%), Positives = 164/449 (36%), Gaps = 116/449 (25%) Query: 703 QRSPFNDRFPLKRPRYEDSDKPFVDSPASRFAGLDTNQRLTALAEDRPLFDGPSRPSVAR 762 QRSP L RP+ ++ P GL + A+ E L +GP P Sbjct: 245 QRSPQQQPSRLHRPQNQEPQSQAAHGPR----GLKGEKGEPAVLEPGMLVEGPPGP---- 296 Query: 763 DGPTKMIFEGPNKLSPRIDGPPTPASLRFDGSPGQMGGGGPLRFEGPQGQLGGGCPLRFE 822 +GP +I GP P I G P P G PG+ G G G + Sbjct: 297 EGPAGLI--GP----PGIQGNPGPV-----GDPGERGPPGRAGLPGS------------D 333 Query: 823 GPPGPVGTPLRFEGPIGQAGGGGFRFEGSPGLRFEG--SPGGLRFEGPGGQPVGGLRFEG 880 G PGP GT L G GG + + + L GP G G Sbjct: 334 GAPGPPGTSLMLPFRFGSGGGDKGPVVAAQEAQAQAILQQARLALRGPPGP-------MG 386 Query: 881 HRGQPVGGLRFEGPHGQPVG-GLRFDNPRGQPVGGLRFEGGHGPSGAAIR-----FDGPH 934 + G+P GP GQP GL+ ++ P G +G GP G A R DG Sbjct: 387 YTGRP-------GPLGQPGSPGLKGESGDLGPQGPRGPQGLTGPPGKAGRRGRAGADGAR 439 Query: 935 GQPG-----GGIRFEG-PLLQQGVGMR-------FEGPHGQSVAGLRFEGQHNQLG---- 977 G PG G F+G P L G R GP G+ G R G ++G Sbjct: 440 GMPGDPGVKGDRGFDGLPGLPGEKGHRGDTGAQGLPGPPGED--GER--GDDGEIGPRGL 495 Query: 978 ----GNLRFEGPHGQPGVGIRFEGPLVQQGGGMRFEGPSVPGGGLRIEGPLGQGGPRFEG 1033 G GP G PG+ GP +G +GP P G L GP G+ GP Sbjct: 496 PGESGPRGLLGPKGPPGI----PGPPGVRG----MDGPQGPKGSL---GPQGEPGP---- 540 Query: 1034 CHALRFDGQPGQPSL--LPRFDGL---HGQPGPRFERTPGQPGPQRFDGPPGQQVQPRFD 1088 GQ G P LP G HG+ GP + PG PG DGPPG P + Sbjct: 541 ------PGQQGTPGTQGLPGPQGAIGPHGEKGP--QGKPGLPGMPGSDGPPG---HPGKE 589 Query: 1089 GVP--QRFDGPQHQQASRFDIPLGLQGTR 1115 G P + GP Q PLG G R Sbjct: 590 GPPGTKGNQGPSGPQG-----PLGYPGPR 613 Score = 81.3 bits (199), Expect = 7e-15 Identities = 102/319 (31%), Positives = 123/319 (38%), Gaps = 89/319 (27%) Query: 781 DGPP-TPASLRFDGSPGQMGGGGPLRFEGPQG---------QLGGGCPLRFEGPPGPVGT 830 DGP P + F G PG G GGP +G +G Q G P GPPGP+G Sbjct: 1153 DGPKGNPGPVGFPGDPGPPGEGGPRGQDGAKGDRGEDGEPGQPGSPGPTGENGPPGPLGK 1212 Query: 831 PLRFEGPIGQAGG----GGFRFEGSPGLRFEGSPGGLRFEGPGGQPVGGLRFEGHRGQPV 886 GP G G GG +G PG G+PG GP G P G +G RG P Sbjct: 1213 ----RGPAGSPGSEGRQGGKGAKGDPGA--IGAPGKTGPVGPAG-PAGKPGPDGLRGLP- 1264 Query: 887 GGLRFEGPHGQPVGGLRFDNPRGQPVGGLRFEGGHGPSGAAIRFDGPHGQPGGGIRFEGP 946 G + G G+P G P G PVG G G +GA G G PG Sbjct: 1265 GSV---GQQGRP-GATGQAGPPG-PVGPPGLPGLRGDAGA----KGEKGHPG-------- 1307 Query: 947 LLQQGVGMRFEGPHGQSVAGLRFEGQHNQLGGNLRFEGPHGQPGVGIRFEGPLVQQGGGM 1006 +G+ GP G+ +G+ G GP G PG Q G M Sbjct: 1308 ----LIGL--IGPPGE-------QGEKGDRG----LPGPQGSPG-----------QKGEM 1339 Query: 1007 RFEGPSVPGGGLRIEGPLGQGGPRFEGCHALRFDGQPGQPSLLPRFDGLHGQPGPRFERT 1066 G S GP+G GGP G PG P+ G G GP+ E+ Sbjct: 1340 GIPGAS---------GPIGPGGP----------PGLPG-PAGPKGAKGATGPGGPKGEK- 1378 Query: 1067 PGQPGPQRFDGPPGQQVQP 1085 G GP GPPG+ +QP Sbjct: 1379 -GVQGPPGHPGPPGEVIQP 1396 Score = 78.6 bits (192), Expect = 4e-14 Identities = 147/486 (30%), Positives = 167/486 (34%), Gaps = 113/486 (23%) Query: 759 SVARDGPTKMIFEGPNKLSPRIDGPPTPASLRFDGSPGQMGGGGPLRFEGPQGQL----- 813 S DGP EGP + P P + G G G G +GP+G L Sbjct: 657 SRGEDGP-----EGPKGRTGPTGDPGPPGLMGEKGKLGVPGLPGYPGRQGPKGSLGFPGF 711 Query: 814 -------------GGGCPLRFEGPPGPVGTPLRFEGPIGQAG-------GGGFRFEGSPG 853 G P GP GP G GP G G GG G PG Sbjct: 712 PGASGEKGARGLSGKSGPRGERGPTGPRGQ----RGPRGATGKSGAKGTSGGDGPHGPPG 767 Query: 854 LR-FEGSPGGLRFEGPGGQ--PVGGLRFEGHRGQ-----------PVGGLRFEGPHGQ-- 897 R G G F GP G P G GH GQ P G GP G Sbjct: 768 ERGLPGPQGPNGFPGPKGPPGPPGKDGLPGHPGQRGEVGFQGKTGPPGPPGVVGPQGAAG 827 Query: 898 ---PVGGLRFDNPRGQP--------VGGLRFEGGHGPSGAAIRFDGPHGQPGGGIRFEGP 946 P+G P G P G +G GP GA + DGP G G P Sbjct: 828 ETGPMGERGHPGPPGPPGEQGLPGTAGKEGTKGDPGPPGAPGK-DGPAGLRGFPGERGLP 886 Query: 947 LLQQGVGMR-FEGPHG-QSVAGLRFEGQHNQLGGNLRFEGPHGQPGVGIRFEGPLVQQG- 1003 G G++ EGP G AG E GG + GP G+PG +GP G Sbjct: 887 GTAGGPGLKGNEGPSGPPGPAGSPGERGAAGSGGPI---GPPGRPGP----QGPPGAAGE 939 Query: 1004 -GGMRFEGPSVPGGGLRIEGPLGQGGPRF-EGCHALRFD----GQPGQPSLLPRFDGLHG 1057 G +GP P G ++GP+G GP G D G PGQ G HG Sbjct: 940 KGVPGEKGPIGPTGRDGVQGPVGLPGPAGPPGVAGEDGDKGEVGDPGQKGTKGN-KGEHG 998 Query: 1058 QPGPRFERTP-GQPGPQRFDGPPGQQ-VQPRF----DGVPQRFDGPQHQQASRFDIPLGL 1111 PGP P GQPG DG PG + Q F D + F+GP P+GL Sbjct: 999 PPGPPGPIGPVGQPGAAGADGEPGARGPQGHFGAKGDEGTRGFNGPPG--------PIGL 1050 Query: 1112 QGTRFDNHPSQRLESVSFNQTGPYN--DPPGNAFNAPSQGLQFQRHEQIFDSPQGPNFNG 1169 QG P E GP PPG A G D PQGP Sbjct: 1051 QGL-----PGPSGEKGETGDVGPMGPPGPPGPRGPAGPNGA---------DGPQGP---- 1092 Query: 1170 PHGPGN 1175 P G GN Sbjct: 1093 PGGVGN 1098 Score = 33.5 bits (75), Expect = 1.6 Identities = 32/88 (36%), Positives = 36/88 (40%), Gaps = 9/88 (10%) Query: 782 GPPTPASLRFDGSP-GQMGGGGPLRFEGPQGQLGGGCPLRFEGPPGPVGTPLRFEGP-IG 839 GP P L P G G GP GP+G+ G P GPPG V PL + P Sbjct: 1349 GPGGPPGLPGPAGPKGAKGATGP---GGPKGEKGVQGPPGHPGPPGEVIQPLPIQMPKKT 1405 Query: 840 QAGGGGFRF----EGSPGLRFEGSPGGL 863 + G R E P GSPGGL Sbjct: 1406 RRSVDGSRLMQEDEAIPTGGAPGSPGGL 1433 >gi|111118970 collagen, type XI, alpha 2 isoform 1 preproprotein [Homo sapiens] Length = 1736 Score = 101 bits (251), Expect = 6e-21 Identities = 133/376 (35%), Positives = 155/376 (41%), Gaps = 75/376 (19%) Query: 753 DGPSRPSVARDGPTKMIFEGPNKLSPRIDGPPTPASLRFDGSPGQMGGGGPLRFEG---- 808 DGP P R P +GPN P GPP P DG PG G G + F+G Sbjct: 867 DGPHGPPGERGLPGP---QGPNGF-PGPKGPPGPPGK--DGLPGHPGQRGEVGFQGKTGP 920 Query: 809 --------PQGQLGGGCPLRFEGPPGPVGTPLRFEGPIGQAGGGGFRFE-GSPGLRFEGS 859 PQG G P+ G PGP G P +G G AG G + + G PG + Sbjct: 921 PGPPGVVGPQGAAGETGPMGERGHPGPPGPPGE-QGLPGTAGKEGTKGDPGPPGAPGKDG 979 Query: 860 PGGLR-FEGPGGQP--VGGLRFEGHRGQPVGGLRFEGPHGQPVGGLRFDNPRGQPVGGLR 916 P GLR F G G P GG +G+ G P G GP G P G R G P+G Sbjct: 980 PAGLRGFPGERGLPGTAGGPGLKGNEG-PSGP---PGPAGSP--GERGAAGSGGPIGPPG 1033 Query: 917 FEGGHGPSGAAIRFDGPHGQPG--GGIRFEGPLLQQGV--GMRFEGPHG-QSVAGLRFEG 971 G GP GAA G G PG G I GP + GV + GP G VAG +G Sbjct: 1034 RPGPQGPPGAA----GEKGVPGEKGPI---GPTGRDGVQGPVGLPGPAGPPGVAG--EDG 1084 Query: 972 QHNQLG-----GNLRFEGPHGQPGVGIRFEGPL--VQQGGGMRFEGPSVPGGGLRIEGPL 1024 ++G G +G HG PG GP+ V Q G +G PG GP Sbjct: 1085 DKGEVGDPGQKGTKGNKGEHGPPGP----PGPIGPVGQPGAAGADGE--PGA----RGPQ 1134 Query: 1025 GQGGPR-FEGCHALRFDGQPGQPSLLPRFDGLHGQPGPRFER-TPGQPGPQRFDGPPGQQ 1082 G G + EG F+G PG GL G PGP E+ G GP GPPG Sbjct: 1135 GHFGAKGDEGTRG--FNGPPGP-------IGLQGLPGPSGEKGETGDVGPMGPPGPPG-- 1183 Query: 1083 VQPRFDGVPQRFDGPQ 1098 PR P DGPQ Sbjct: 1184 --PRGPAGPNGADGPQ 1197 Score = 94.4 bits (233), Expect = 8e-19 Identities = 136/417 (32%), Positives = 161/417 (38%), Gaps = 93/417 (22%) Query: 773 PNKLSPR-IDGPPTPASLRFDGSPGQMGGGGPLRFEGPQGQLGGGCPLRFEGPPGPVGTP 831 P + PR + GP P + G PG G GP +GP+G LG P GPPG GTP Sbjct: 603 PGESGPRGLLGPKGPPGI--PGPPGVRGMDGP---QGPKGSLG---PQGEPGPPGQQGTP 654 Query: 832 --LRFEGPIGQAGGGGFRF-EGSPGLRFEGSPGGLRFEGPGGQPVGGLRFEGHRGQPVGG 888 GP G G G + +G PGL G PG +GP G P G G P G Sbjct: 655 GTQGLPGPQGAIGPHGEKGPQGKPGL--PGMPGS---DGPPGHP-------GKEGPP-GT 701 Query: 889 LRFEGPHGQPVGGLRFDNPRG-QPVGGLRFEGGHGPSGAAIRFDGPHGQPG--GGIRFEG 945 +GP G P G L + PRG + V G+R GH G G PG G I +G Sbjct: 702 KGNQGPSG-PQGPLGYPGPRGVKGVDGIRGLKGHKGE------KGEDGFPGFKGDIGVKG 754 Query: 946 PLLQQGV-GMRF----EGPHGQS-------VAGLRFEGQHNQLG-----GNLRFEGPHGQ 988 + GV G R EGP G++ GL G+ +LG G +GP G Sbjct: 755 DRGEVGVPGSRGEDGPEGPKGRTGPTGDPGPPGLM--GEKGKLGVPGLPGYPGRQGPKGS 812 Query: 989 PGVGIRFEGPLVQQGGGMRFEGPSVPGGGLRIEGPLGQGGPRFEGCHALRFDGQPGQPSL 1048 G F G ++ G G S P G GP GQ GPR A G G Sbjct: 813 LGFP-GFPGASGEK-GARGLSGKSGPRGERGPTGPRGQRGPR----GATGKSGAKGTSG- 865 Query: 1049 LPRFDGLHGQPGPRFERTPGQPGPQRFDGPPGQQVQPRFDGVPQRFDGPQHQQASRFDIP 1108 DG HG PG R PG GP F GP G P DG+P Sbjct: 866 ---GDGPHGPPGER--GLPGPQGPNGFPGPKGPPGPPGKDGLP----------------- 903 Query: 1109 LGLQGTRFDNHPSQRLESVSFNQTGPYNDPPGNAFNAPSQGLQFQRHEQIFDSPQGP 1165 HP QR E +TGP PPG + G E+ P GP Sbjct: 904 ---------GHPGQRGEVGFQGKTGP-PGPPGVVGPQGAAGETGPMGERGHPGPPGP 950 Score = 91.3 bits (225), Expect = 7e-18 Identities = 114/341 (33%), Positives = 137/341 (40%), Gaps = 43/341 (12%) Query: 783 PPTPASLRFDGSPGQMGGGGPLRFEGPQGQLGGGCPLRFEGPPGPVGTP--LRFEGPIGQ 840 P P DG PG G GP +G QG G PL + GP G G +G G+ Sbjct: 678 PGLPGMPGSDGPPGHPGKEGPPGTKGNQGPSGPQGPLGYPGPRGVKGVDGIRGLKGHKGE 737 Query: 841 AGGGGFR-FEGSPGLRFE----GSPGGLRFEGPGGQPVGGLRFEGHRGQPVGGLRFEGPH 895 G GF F+G G++ + G PG +GP G P G G G P G + +G Sbjct: 738 KGEDGFPGFKGDIGVKGDRGEVGVPGSRGEDGPEG-PKGRTGPTGDPGPP-GLMGEKGKL 795 Query: 896 GQPVGGLRFDNPRGQPVGGLRFEGGHGPSGAAIRFDGPHGQPGGGIRFEGPLLQQGVGMR 955 G P GL R P G L F G G SG G G G GP ++G Sbjct: 796 GVP--GLPGYPGRQGPKGSLGFPGFPGASGEK----GARGLSGKS----GPRGERGP--- 842 Query: 956 FEGPHGQSVAGLRFEGQHNQLGGNLRFEGPHGQPGVGIRFEGPLVQQGGGMRFEGPSVPG 1015 GP GQ G R + G +GPHG PG E L G F GP P Sbjct: 843 -TGPRGQR--GPRGATGKSGAKGTSGGDGPHGPPG-----ERGLPGPQGPNGFPGPKGPP 894 Query: 1016 GGLRIEGPLGQGGPRFEGCHALRFDGQ---PGQPSLLPRFDGLHGQPGPRFERTPGQPGP 1072 G +G G G R E + F G+ PG P ++ G G+ GP ER G PGP Sbjct: 895 GPPGKDGLPGHPGQRGE----VGFQGKTGPPGPPGVVGP-QGAAGETGPMGER--GHPGP 947 Query: 1073 QRFDGPPGQQVQPRFDGVPQRFDGPQHQQASRFDIPLGLQG 1113 GPPG+Q P G P A D P GL+G Sbjct: 948 P---GPPGEQGLPGTAGKEGTKGDPGPPGAPGKDGPAGLRG 985 Score = 87.0 bits (214), Expect = 1e-16 Identities = 119/390 (30%), Positives = 149/390 (38%), Gaps = 79/390 (20%) Query: 762 RDGPTKMI-FEGPNKLSPRIDGPPTPASLRFDGSPGQMGGGGPLRFEGPQGQLGGGCPLR 820 +DGP + F G L GP G+ G G GP G +G G G P+ Sbjct: 977 KDGPAGLRGFPGERGLPGTAGGPG------LKGNEGPSGPPGPAGSPGERGAAGSGGPIG 1030 Query: 821 FEGPPGPVGTPLRF--------EGPIGQAGGGGFRF-------EGSPGLRFE-------G 858 G PGP G P +GPIG G G + G PG+ E G Sbjct: 1031 PPGRPGPQGPPGAAGEKGVPGEKGPIGPTGRDGVQGPVGLPGPAGPPGVAGEDGDKGEVG 1090 Query: 859 SPGGLRFEGPGGQ-----------PVGGLRFEGHRGQP--------------VGGLRFEG 893 PG +G G+ PVG G G+P G F G Sbjct: 1091 DPGQKGTKGNKGEHGPPGPPGPIGPVGQPGAAGADGEPGARGPQGHFGAKGDEGTRGFNG 1150 Query: 894 PHGQPVGGLRFDNPRGQ-----PVGGLRFEGGHGPSGAA--IRFDGPHGQPGGGIRFEGP 946 P G P+G P G+ VG + G GP G A DGP G P GG+ GP Sbjct: 1151 PPG-PIGLQGLPGPSGEKGETGDVGPMGPPGPPGPRGPAGPNGADGPQGPP-GGVGNLGP 1208 Query: 947 LLQQGVGMRFEGPHGQSVAGLRFEGQHNQLGGNLRFEGPHGQPGVGIRFEGPLVQQG--G 1004 ++G P Q G++ G + G +G GQPG GP +G G Sbjct: 1209 PGEKGEPGESGSPGIQGEPGVK--GPRGERGE----KGESGQPGE----PGPPGPKGPTG 1258 Query: 1005 GMRFEGPSVPGGGLRIEGPLGQGGPR-FEGCHALR-FDGQPGQPSLLPRFDGLHGQPGPR 1062 +G P G GP G+GGPR +G R DG+PGQP P G +G PGP Sbjct: 1259 DDGPKGNPGPVGFPGDPGPPGEGGPRGQDGAKGDRGEDGEPGQPG-SPGPTGENGPPGPL 1317 Query: 1063 FERTP-GQPGPQRFDGPPGQQVQPRFDGVP 1091 +R P G PG + G G + P G P Sbjct: 1318 GKRGPAGSPGSEGRQGGKGAKGDPGAIGAP 1347 Score = 81.3 bits (199), Expect = 7e-15 Identities = 102/319 (31%), Positives = 123/319 (38%), Gaps = 89/319 (27%) Query: 781 DGPP-TPASLRFDGSPGQMGGGGPLRFEGPQG---------QLGGGCPLRFEGPPGPVGT 830 DGP P + F G PG G GGP +G +G Q G P GPPGP+G Sbjct: 1260 DGPKGNPGPVGFPGDPGPPGEGGPRGQDGAKGDRGEDGEPGQPGSPGPTGENGPPGPLGK 1319 Query: 831 PLRFEGPIGQAGG----GGFRFEGSPGLRFEGSPGGLRFEGPGGQPVGGLRFEGHRGQPV 886 GP G G GG +G PG G+PG GP G P G +G RG P Sbjct: 1320 ----RGPAGSPGSEGRQGGKGAKGDPGA--IGAPGKTGPVGPAG-PAGKPGPDGLRGLP- 1371 Query: 887 GGLRFEGPHGQPVGGLRFDNPRGQPVGGLRFEGGHGPSGAAIRFDGPHGQPGGGIRFEGP 946 G + G G+P G P G PVG G G +GA G G PG Sbjct: 1372 GSV---GQQGRP-GATGQAGPPG-PVGPPGLPGLRGDAGA----KGEKGHPG-------- 1414 Query: 947 LLQQGVGMRFEGPHGQSVAGLRFEGQHNQLGGNLRFEGPHGQPGVGIRFEGPLVQQGGGM 1006 +G+ GP G+ +G+ G GP G PG Q G M Sbjct: 1415 ----LIGL--IGPPGE-------QGEKGDRG----LPGPQGSPG-----------QKGEM 1446 Query: 1007 RFEGPSVPGGGLRIEGPLGQGGPRFEGCHALRFDGQPGQPSLLPRFDGLHGQPGPRFERT 1066 G S GP+G GGP G PG P+ G G GP+ E+ Sbjct: 1447 GIPGAS---------GPIGPGGP----------PGLPG-PAGPKGAKGATGPGGPKGEK- 1485 Query: 1067 PGQPGPQRFDGPPGQQVQP 1085 G GP GPPG+ +QP Sbjct: 1486 -GVQGPPGHPGPPGEVIQP 1503 Score = 80.5 bits (197), Expect = 1e-14 Identities = 122/394 (30%), Positives = 148/394 (37%), Gaps = 97/394 (24%) Query: 758 PSVARDGPTKMIFEGPNKLSPRIDGPPTPASLRFDGSPGQMGGGGPLRFEGPQGQLGGGC 817 P+V G M+ EGP GP PA L G PG G GP+ G +G G Sbjct: 388 PAVLEPG---MLVEGP-------PGPEGPAGLI--GPPGIQGNPGPVGDPGERGPPGRAG 435 Query: 818 PLRFEGPPGPVGTPLRFEGPIGQAGGGGFRFEGSPGLRFEG--SPGGLRFEGPGGQPVGG 875 +G PGP GT L G GG + + + L GP G Sbjct: 436 LPGSDGAPGPPGTSLMLPFRFGSGGGDKGPVVAAQEAQAQAILQQARLALRGPPGP---- 491 Query: 876 LRFEGHRGQPVGGLRFEGPHGQPVG-GLRFDNPRGQPVGGLRFEGGHGPSGAAIR----- 929 G+ G+P GP GQP GL+ ++ P G +G GP G A R Sbjct: 492 ---MGYTGRP-------GPLGQPGSPGLKGESGDLGPQGPRGPQGLTGPPGKAGRRGRAG 541 Query: 930 FDGPHGQPG-----GGIRFEG-PLLQQGVGMR-------FEGPHGQSVAGLRFEGQHNQL 976 DG G PG G F+G P L G R GP G+ G R G ++ Sbjct: 542 ADGARGMPGDPGVKGDRGFDGLPGLPGEKGHRGDTGAQGLPGPPGED--GER--GDDGEI 597 Query: 977 G--------GNLRFEGPHGQPGVGIRFEGPLVQQGGGMRFEGPSVPGGGLRIEGPLGQGG 1028 G G GP G PG+ GP +G +GP P G L GP G+ G Sbjct: 598 GPRGLPGESGPRGLLGPKGPPGI----PGPPGVRG----MDGPQGPKGSL---GPQGEPG 646 Query: 1029 PRFEGCHALRFDGQPGQPSL--LPRFDGL---HGQPGPRFERTPGQPGPQRFDGPPGQQV 1083 P GQ G P LP G HG+ GP + PG PG DGPPG Sbjct: 647 P----------PGQQGTPGTQGLPGPQGAIGPHGEKGP--QGKPGLPGMPGSDGPPG--- 691 Query: 1084 QPRFDGVP--QRFDGPQHQQASRFDIPLGLQGTR 1115 P +G P + GP Q PLG G R Sbjct: 692 HPGKEGPPGTKGNQGPSGPQG-----PLGYPGPR 720 Score = 71.2 bits (173), Expect = 7e-12 Identities = 121/415 (29%), Positives = 149/415 (35%), Gaps = 94/415 (22%) Query: 786 PASLRFDGSPGQMGGGGPLRFEGPQGQLGG-GCPLRFEGPPGPV------GTPLRFEGPI 838 P + RF + G GG EGP G G R E GP + GP Sbjct: 322 PTADRFQAE--EYGEGGTDPPEGPYDYTYGYGDDYREETELGPALSAETAHSGAAAHGPR 379 Query: 839 GQAGGGGFRFEGSPGLRFEGSPGGLRFEGPGGQPVGGLRFEGHRGQPVGGLRFEGPHGQP 898 G G G PG+ EG PG EGP G +G +G+ G PVG GP G+ Sbjct: 380 GLKGEKGEPAVLEPGMLVEGPPGP---EGPAGL-IGPPGIQGNPG-PVGDPGERGPPGR- 433 Query: 899 VGGLRFDNPRGQPVGGLRFEGGHGPSGAAIRFDGPHGQPGGGIRFEGPLLQQGVGMRFEG 958 G P +G GP G ++ G GG +GP+ Sbjct: 434 ---------AGLPGS----DGAPGPPGTSLMLPFRFGSGGGD---KGPV----------- 466 Query: 959 PHGQSVAGLRFEGQHNQLGGNLRFEGPHGQPGVGIRFEGPLVQQGG-GMRFE----GPSV 1013 VA + Q L GP G G R GPL Q G G++ E GP Sbjct: 467 -----VAAQEAQAQAILQQARLALRGPPGPMGYTGR-PGPLGQPGSPGLKGESGDLGPQG 520 Query: 1014 PGGGLRIEGPLGQGGPRFE-GCHALRFDGQPGQPSLL--PRFDGLHGQPGPRFERTPGQP 1070 P G + GP G+ G R G R G PG P + FDGL G PG + R G Sbjct: 521 PRGPQGLTGPPGKAGRRGRAGADGAR--GMPGDPGVKGDRGFDGLPGLPGEKGHR--GDT 576 Query: 1071 GPQRFDGPPGQQVQPRFDGV-----------PQRFDGPQHQQASRFDIPLGLQGTRFDNH 1119 G Q GPPG+ + DG P+ GP+ P G++G Sbjct: 577 GAQGLPGPPGEDGERGDDGEIGPRGLPGESGPRGLLGPKGPPG--IPGPPGVRGMDGPQG 634 Query: 1120 PSQRLESVSFNQTGPYND--PPGNAFNAPSQGLQFQRHEQIFDSPQGPNFNGPHG 1172 P L GP + PPG +QGL PQG GPHG Sbjct: 635 PKGSL--------GPQGEPGPPGQQGTPGTQGL---------PGPQGA--IGPHG 670 Score = 33.5 bits (75), Expect = 1.6 Identities = 32/88 (36%), Positives = 36/88 (40%), Gaps = 9/88 (10%) Query: 782 GPPTPASLRFDGSP-GQMGGGGPLRFEGPQGQLGGGCPLRFEGPPGPVGTPLRFEGP-IG 839 GP P L P G G GP GP+G+ G P GPPG V PL + P Sbjct: 1456 GPGGPPGLPGPAGPKGAKGATGP---GGPKGEKGVQGPPGHPGPPGEVIQPLPIQMPKKT 1512 Query: 840 QAGGGGFRF----EGSPGLRFEGSPGGL 863 + G R E P GSPGGL Sbjct: 1513 RRSVDGSRLMQEDEAIPTGGAPGSPGGL 1540 >gi|148536825 alpha 1 type IV collagen preproprotein [Homo sapiens] Length = 1669 Score = 100 bits (250), Expect = 8e-21 Identities = 110/336 (32%), Positives = 132/336 (39%), Gaps = 79/336 (23%) Query: 791 FDGSPGQMGGGGPLRFEGPQGQLGG-GCPLR--FEGPPGPVGTPLRFEGPIGQAGGGGFR 847 + G PG G G + F G G G G P R G PGP GTP G IGQ G G Sbjct: 475 YRGPPGPQGPPGEIGFPGQPGAKGDRGLPGRDGVAGVPGPQGTP----GLIGQPGAKGEP 530 Query: 848 FEGSPGLRFEGSPGGLRFEGPGGQP--VGGLRFEGHRGQPVGGLRFEGPHGQPVGGLRFD 905 E LR +G G F G G G +GH G P GP G P G + Sbjct: 531 GEFYFDLRLKGDKGDPGFPGQPGMTGRAGSPGRDGHPGLP-------GPKGSP-GSVGLK 582 Query: 906 NPRGQPVGGLRFEGGHGPSGAAIRFDGPHGQPGGGIRFEGPLLQQGVGMRFEGPHGQSVA 965 RG P GG+ F G G +G P G PG G GP+ +G GP Sbjct: 583 GERGPP-GGVGFPGSRGDTG-------PPGPPGYGPA--GPIGDKGQAGFPGGP------ 626 Query: 966 GLRFEGQHNQLGGNLRFEGPHGQPGVGIRFEGPLVQQGGGMRFEGPSVPGGGLRIEGPLG 1025 G+ GP G+PG + GP +G P PG GP G Sbjct: 627 ------------GSPGLPGPKGEPGKIVPLPGPPGAEGL------PGSPG----FPGPQG 664 Query: 1026 QGGPRFEGCHALRFDGQPGQPSLLPRFDGLHGQPGPRFERTPGQPGPQRFD------GPP 1079 G F G PG+P L P G GQPG F PG PGP+ D GPP Sbjct: 665 DRG----------FPGTPGRPGL-PGEKGAVGQPGIGF---PGPPGPKGVDGLPGDMGPP 710 Query: 1080 GQQVQPRFDGVPQRFDGPQHQQASRFDIPLGLQGTR 1115 G +P F+G+P G Q + + +GL G + Sbjct: 711 GTPGRPGFNGLP----GNPGVQGQKGEPGVGLPGLK 742 Score = 96.3 bits (238), Expect = 2e-19 Identities = 133/424 (31%), Positives = 158/424 (37%), Gaps = 90/424 (21%) Query: 777 SPRIDGPPTPASLRFDGSPGQMGGGGPLRFEGPQGQLGGGCPLRFEGPPGPVGTPLRFEG 836 SP + G +P S+ + GSPG G G G G G G PGP G P +G Sbjct: 1095 SPGLKG--SPGSVGYPGSPGLPGEKGDKGLPGLDGIPGVKGEAGLPGTPGPTG-PAGQKG 1151 Query: 837 PIGQAGGGGFRFE-GSPGLRFEGSPGGLRFEGPGGQPVGGLRFEGHRGQP-----VGGLR 890 G G G E G PGL G PG +G G G + F G G P G Sbjct: 1152 EPGSDGIPGSAGEKGEPGLPGRGFPGFPGAKGDKGSK-GEVGFPGLAGSPGIPGSKGEQG 1210 Query: 891 FEGPHGQPVGGLRFDNPRGQPVGGLRFEGGH---GPSGAAIRFDGPHGQPG-GGIRFEGP 946 F GP G P+GQP GL GH GP G GP GQPG G+ GP Sbjct: 1211 FMGPPG----------PQGQP--GLPGSPGHATEGPKGDR----GPQGQPGLPGL--PGP 1252 Query: 947 LLQQGVGMRFEGPHG-QSVAGLRFEGQHNQLGGNLRFEGPHGQPGV----GIRFEGPLVQ 1001 + GP G + G++ + + G GP G PG GI + Sbjct: 1253 M----------GPPGLPGIDGVKGDKGNPGWPGAPGVPGPKGDPGFQGMPGIGGSPGITG 1302 Query: 1002 QGGGM------RFEGPSVPGGGLRIEGPLG-QGGPRFEGCHALRFDGQPGQPSLLPRFDG 1054 G M F+GP G I+G G QG P +G G PG P G Sbjct: 1303 SKGDMGPPGVPGFQGPKGLPGLQGIKGDQGDQGVPGAKG-----LPGPPGPPGPYDIIKG 1357 Query: 1055 LHGQPGPRFERTPGQPGPQRFDGPPGQQVQPRFDGVPQRFDGPQHQQASRFDIPLGLQGT 1114 G PGP E PG G Q GP GQQ G+P P G+ G Sbjct: 1358 EPGLPGP--EGPPGLKGLQGLPGPKGQQGVTGLVGIPG---------------PPGIPG- 1399 Query: 1115 RFDNHPSQRLESVSFNQTGP--YNDPPG-----NAFNAP-----SQGLQFQRHEQIFDSP 1162 FD P Q+ E TGP + PPG + P G RH Q D P Sbjct: 1400 -FDGAPGQKGEMGPAGPTGPRGFPGPPGPDGLPGSMGPPGTPSVDHGFLVTRHSQTIDDP 1458 Query: 1163 QGPN 1166 Q P+ Sbjct: 1459 QCPS 1462 Score = 93.6 bits (231), Expect = 1e-18 Identities = 112/347 (32%), Positives = 141/347 (40%), Gaps = 53/347 (15%) Query: 781 DGPPTPASLRFD----GSPGQMGGGGPLRFEGPQGQLG-GGCPLRFEGPPGPVGTP---- 831 +GP P + D G PG G GP G G G G P + +GPPGP G P Sbjct: 69 EGPQGPPGQKGDTGEPGLPGTKGTRGPPGASGYPGNPGLPGIPGQ-DGPPGPPGIPGCNG 127 Query: 832 -LRFEGPIGQAGGGGFRFE-GSPGLR-FEGSPGGLRFEGPGGQPVGGLRFEGHRGQPVGG 888 GP+G G GF G PGL +G PG + PG G F G G P G Sbjct: 128 TKGERGPLGPPGLPGFAGNPGPPGLPGMKGDPGEILGHVPGMLLKGERGFPGIPGTP-GP 186 Query: 889 LRFEGPHGQPVGGLRFDNPRGQPVG----------GLRFEGGHGPSGAAIRFDGPHGQPG 938 G G PVG F P G P GL F+G G G GP G PG Sbjct: 187 PGLPGLQG-PVGPPGFTGPPGPPGPPGPPGEKGQMGLSFQGPKGDKGDQ-GVSGPPGVPG 244 Query: 939 GG-IRFEGPLLQQGVGMRFEGPHGQSVAGLRFEGQHNQLG--------------GNLRFE 983 ++ +G +G + P Q + G+ +G+ + G G+ F Sbjct: 245 QAQVQEKGDFATKGEKGQKGEPGFQGMPGVGEKGEPGKPGPRGKPGKDGDKGEKGSPGFP 304 Query: 984 GPHGQPGVGIRFEGPLVQQGGGMRFEGPSVPGGGLRIEGPLGQGGPR-FEGCHALRFDGQ 1042 G G PG+ I +GP ++G GP P G + GPLG+ G R + G R G+ Sbjct: 305 GEPGYPGL-IGRQGPQGEKGEA----GPPGPPGIVIGTGPLGEKGERGYPGTPGPR--GE 357 Query: 1043 PGQPSLLPRFDGLHGQPGPRFERTPGQPGPQRFDGPPGQQVQPRFDG 1089 PG F GL GQPGP PGQ G F G G++ F G Sbjct: 358 PGPKG----FPGLPGQPGPPGLPVPGQAGAPGFPGERGEKGDRGFPG 400 Score = 86.3 bits (212), Expect = 2e-16 Identities = 135/465 (29%), Positives = 162/465 (34%), Gaps = 98/465 (21%) Query: 778 PRIDGPPTPASLRFDGSPGQMGGGGPLRFEGPQGQLGGGCPLRFEGPPGPVGTP----LR 833 P I G P P L PG G GP F GP G GPPGP G L Sbjct: 178 PGIPGTPGPPGL-----PGLQGPVGPPGFTGPPGP---------PGPPGPPGEKGQMGLS 223 Query: 834 FEGPIGQAGGGGFR------------------------------FEGSPGLRFEGSPGGL 863 F+GP G G G F+G PG+ +G PG Sbjct: 224 FQGPKGDKGDQGVSGPPGVPGQAQVQEKGDFATKGEKGQKGEPGFQGMPGVGEKGEPGK- 282 Query: 864 RFEGPGGQP--------VGGLRFEGHRGQPVGGLRFEGPHGQ--------PVGGLRFDNP 907 GP G+P G F G G P G + +GP G+ P G + P Sbjct: 283 --PGPRGKPGKDGDKGEKGSPGFPGEPGYP-GLIGRQGPQGEKGEAGPPGPPGIVIGTGP 339 Query: 908 RGQPVGGLRFEGGHGPSG--AAIRFDGPHGQPG-GGIRFEGPLLQQGV-GMRFE-GPHGQ 962 G+ G + G GP G F G GQPG G+ G G G R E G G Sbjct: 340 LGEK-GERGYPGTPGPRGEPGPKGFPGLPGQPGPPGLPVPGQAGAPGFPGERGEKGDRGF 398 Query: 963 SVAGLRFEGQHNQLGGNLRFEGPHGQPGVGIRFEGPLVQQGGGMRFEGPSVPGGGLRIEG 1022 L + L G GP GQPG G + Q G +GP G G Sbjct: 399 PGTSLPGPSGRDGLPGPPGSPGPPGQPGY---TNGIVECQPGPPGDQGPPGIPGQPGFIG 455 Query: 1023 PLGQGGPRFEGCHALRFDGQPGQPSLL--PRFDGLHGQPGPRFERTPGQPGPQRFDGPPG 1080 +G+ G + E C DG G P P G GQPG + +R G PG G PG Sbjct: 456 EIGEKGQKGESCLICDIDGYRGPPGPQGPPGEIGFPGQPGAKGDR--GLPGRDGVAGVPG 513 Query: 1081 QQVQPRFDGVPQRFDGPQHQQASRFDIPLGLQGTRFD-NHPSQRLESVSFNQTGPYNDP- 1138 Q P G P P F L L+G + D P Q + G P Sbjct: 514 PQGTPGLIGQPGAKGEP-----GEFYFDLRLKGDKGDPGFPGQPGMTGRAGSPGRDGHPG 568 Query: 1139 -PGNAFNAPSQGLQFQR---------HEQIFDSPQGPNFNGPHGP 1173 PG + S GL+ +R + P GP GP GP Sbjct: 569 LPGPKGSPGSVGLKGERGPPGGVGFPGSRGDTGPPGPPGYGPAGP 613 Score = 82.8 bits (203), Expect = 2e-15 Identities = 120/383 (31%), Positives = 144/383 (37%), Gaps = 72/383 (18%) Query: 754 GPSRPSVARDGPTKMIFEGP--NKLSPRIDGPPTPASLRFDGSPGQMGGGGPLRFEGPQG 811 GP+ P+ + P G K P + G P F G+ G G G + F G G Sbjct: 1142 GPTGPAGQKGEPGSDGIPGSAGEKGEPGLPGRGFPG---FPGAKGDKGSKGEVGFPGLAG 1198 Query: 812 QLG---GGCPLRFEGPPGPVGTPLRFEGPIGQAGGGGFRFEGSPGLRF-EGSPGGLRFEG 867 G F GPPGP G P G G G EG G R +G PG G Sbjct: 1199 SPGIPGSKGEQGFMGPPGPQGQP-------GLPGSPGHATEGPKGDRGPQGQPGLPGLPG 1251 Query: 868 PGGQP----VGGLRFEGHRGQP--VGGLRFEGPHGQPVGGLRFDNPRGQPVGGLRFEGGH 921 P G P + G++ G +G P G GP G P G + G G +G Sbjct: 1252 PMGPPGLPGIDGVK--GDKGNPGWPGAPGVPGPKGDP--GFQGMPGIGGSPGITGSKGDM 1307 Query: 922 GPSGAAIRFDGPHGQPG-GGIRFEGPLLQQGV--GMRFEGPHGQSVAGLRFEGQHNQLGG 978 GP G F GP G PG GI+ G QGV GP G G ++ + G Sbjct: 1308 GPPGVP-GFQGPKGLPGLQGIK--GDQGDQGVPGAKGLPGPPGP-------PGPYDIIKG 1357 Query: 979 NLRFEGPHGQPGV-GIR-FEGPLVQQGGGMRFEGPSVPGGGLRIEGPLGQGGPRFEGCHA 1036 GP G PG+ G++ GP QQG G + I GP G G Sbjct: 1358 EPGLPGPEGPPGLKGLQGLPGPKGQQG----------VTGLVGIPGPPGIPG-------- 1399 Query: 1037 LRFDGQPGQPSLLPRFDGLHGQPGPRFERTPGQPGPQRFDGPPGQQVQPRFDGVPQRFDG 1096 FDG PGQ + G G GPR PG PGP DG PG P V F Sbjct: 1400 --FDGAPGQKGEM----GPAGPTGPR--GFPGPPGP---DGLPGSMGPPGTPSVDHGFLV 1448 Query: 1097 PQHQQASRFDIPLGLQGTRFDNH 1119 +H Q D P GT+ H Sbjct: 1449 TRHSQT--IDDPQCPSGTKILYH 1469 Score = 80.5 bits (197), Expect = 1e-14 Identities = 115/384 (29%), Positives = 142/384 (36%), Gaps = 87/384 (22%) Query: 793 GSPGQMGGGGPLRFEGPQGQLGGGCPLRFEGPPGPVGTPLRFEGPIGQAGGGGFRFE--- 849 G PGQ G G F G +G++G G PGPVG P G G+ G GF Sbjct: 861 GLPGQQGAPGIPGFPGSKGEMGVMGTPGQPGSPGPVGAP----GLPGEKGDHGFPGSSGP 916 Query: 850 -GSPGLRFE-------GSPGGLRF------------EGPGGQPVGGLRFEGHRGQP---- 885 G PGL+ + G PG + +G GQ +G + +G RG P Sbjct: 917 RGDPGLKGDKGDVGLPGKPGSMDKVDMGSMKGQKGDQGEKGQ-IGPIGEKGSRGDPGTPG 975 Query: 886 -------VGGLRFEGPHGQP-----VGGLRFDNPRGQPVGGLRFEGGHGPSGAAIRFDGP 933 G GP G P G P+G VGG+ G G G GP Sbjct: 976 VPGKDGQAGQPGQPGPKGDPGISGTPGAPGLPGPKGS-VGGMGLPGTPGEKGVP-GIPGP 1033 Query: 934 HGQPG-----GGIRFEGPLLQQGVGMR-FEGPHG-QSVAGLRFEGQHNQLG--GNLRFEG 984 G PG G +G G+G+ G G Q +AG F G + G G++ G Sbjct: 1034 QGSPGLPGDKGAKGEKGQAGPPGIGIPGLRGEKGDQGIAG--FPGSPGEKGEKGSIGIPG 1091 Query: 985 PHGQPG-------VGIRFEGPLVQQGGGMRFEG----PSVPG-----GGLRIEGPLGQGG 1028 G PG VG L + G G P V G G GP GQ G Sbjct: 1092 MPGSPGLKGSPGSVGYPGSPGLPGEKGDKGLPGLDGIPGVKGEAGLPGTPGPTGPAGQKG 1151 Query: 1029 -PRFEGCHALRFD-GQPGQPSL-LPRFDGLHGQPGPRFE----------RTPGQPGPQRF 1075 P +G + G+PG P P F G G G + E PG G Q F Sbjct: 1152 EPGSDGIPGSAGEKGEPGLPGRGFPGFPGAKGDKGSKGEVGFPGLAGSPGIPGSKGEQGF 1211 Query: 1076 DGPPGQQVQPRFDGVP-QRFDGPQ 1098 GPPG Q QP G P +GP+ Sbjct: 1212 MGPPGPQGQPGLPGSPGHATEGPK 1235 Score = 79.3 bits (194), Expect = 3e-14 Identities = 127/418 (30%), Positives = 155/418 (37%), Gaps = 76/418 (18%) Query: 783 PPTPASLRFDGSPGQMGGGGPLRFEGPQGQLGGGCPLRFEGPPGPVGTPLRFEGPIGQAG 842 P P G PG G G + G GQ G PGPVG P G G+ G Sbjct: 860 PGLPGQQGAPGIPGFPGSKGEMGVMGTPGQ---------PGSPGPVGAP----GLPGEKG 906 Query: 843 GGGFRF----EGSPGLRFEGSPGGLRFEG-PG-------GQPVGGLRFEGHRGQ--PVGG 888 GF G PGL+ G G + G PG G G +G +GQ P+G Sbjct: 907 DHGFPGSSGPRGDPGLK--GDKGDVGLPGKPGSMDKVDMGSMKGQKGDQGEKGQIGPIGE 964 Query: 889 LRFEGPHGQPVGGLRFDNPRGQPVGGLRFEGGHGPSGAAIRFDGPHGQPGGGIRFEGPLL 948 G G P G D GQP G GP G G G PG GP Sbjct: 965 KGSRGDPGTP-GVPGKDGQAGQP-------GQPGPKGDP-GISGTPGAPG----LPGPKG 1011 Query: 949 QQGVGMRFEGPHGQ-SVAGLRFEGQHNQLGGNLRFEGPHGQ---PGVGI-RFEGPLVQQG 1003 G GM G G+ V G+ L G+ +G GQ PG+GI G QG Sbjct: 1012 SVG-GMGLPGTPGEKGVPGIPGPQGSPGLPGDKGAKGEKGQAGPPGIGIPGLRGEKGDQG 1070 Query: 1004 GGMRFEGPSVPGGGLRIEGPLGQGGPRFEGC-HALRFDGQPGQPSL-----LPRFDGLHG 1057 P G I P G P +G ++ + G PG P LP DG+ G Sbjct: 1071 IAGFPGSPGEKGEKGSIGIPGMPGSPGLKGSPGSVGYPGSPGLPGEKGDKGLPGLDGIPG 1130 Query: 1058 QPGPRFERTPGQPGPQRFDGPPGQQVQPRFDGVPQRFDGPQHQQASRFDIPLGLQGTRFD 1117 G PG PGP GP GQ+ +P DG+P G ++ GL G F Sbjct: 1131 VKGE--AGLPGTPGP---TGPAGQKGEPGSDGIP----GSAGEKGEP-----GLPGRGFP 1176 Query: 1118 NHPSQRLESVSFNQTGPYNDPPGNAFNAPSQGLQFQRHEQIFDSPQGPNFNGPHGPGN 1175 P + + S + G PG A S G+ + EQ F P GP P PG+ Sbjct: 1177 GFPGAKGDKGSKGEVG----FPG---LAGSPGIPGSKGEQGFMGPPGPQ-GQPGLPGS 1226 Score = 70.5 bits (171), Expect = 1e-11 Identities = 137/484 (28%), Positives = 175/484 (36%), Gaps = 105/484 (21%) Query: 749 RPLFDG-PSRPSV-ARDGPTKMIFEGPNKLSPRIDG-PPTPASLRFDGSPGQMGGGGPLR 805 RP F+G P P V + G + G L P + G P TP G PG G G + Sbjct: 715 RPGFNGLPGNPGVQGQKGEPGVGLPGLKGL-PGLPGIPGTPGEKGSIGVPGVPGEHGAI- 772 Query: 806 FEGPQGQLGGGCPLRFEGPPGPVGTPLRFEGPIGQAGGGGFRFEGSPGLRFEGSPGGLRF 865 GP G G G PGP G P G +G G G G PG R G PGG Sbjct: 773 --GPPGLQG------IRGEPGPPGLP----GSVGSPGVPGI---GPPGAR--GPPGG--- 812 Query: 866 EGPGGQPVGGLRFEGHRGQP-VGGLRFEGPHG----QPVGGLRFDN-----PRGQPVGGL 915 +GP G G +G +G P GL GP G Q + G+ + P Q G+ Sbjct: 813 QGPPGLS-GPPGIKGEKGFPGFPGLDMPGPKGDKGAQGLPGITGQSGLPGLPGQQGAPGI 871 Query: 916 -RFEGGHGPSGAAIRFDGPHGQPGGGIRFEGPLLQQGVGMRFEGPHGQSVAGLRFEGQHN 974 F G G G G GQPG GP+ G+ +G HG F G Sbjct: 872 PGFPGSKGEMGVM----GTPGQPGS----PGPVGAPGLPGE-KGDHG-------FPGSSG 915 Query: 975 QLG-----GNLRFEGPHGQPGVGIRFE-GPLVQQGGGMRFEGPSVPGGGLRIEGPLGQGG 1028 G G+ G G+PG + + G + Q G +G P G G G G Sbjct: 916 PRGDPGLKGDKGDVGLPGKPGSMDKVDMGSMKGQKGDQGEKGQIGPIGEKGSRGDPGTPG 975 Query: 1029 PRFEGCHALRFDGQPGQPSLLPRFD-------GLHGQPGPRFE----RTPGQPGPQRFDG 1077 + A GQPGQP P+ D G G PGP+ PG PG + G Sbjct: 976 VPGKDGQA----GQPGQPG--PKGDPGISGTPGAPGLPGPKGSVGGMGLPGTPGEKGVPG 1029 Query: 1078 PPGQQVQPRFDGVPQRFDGPQHQQASRFDIPLGLQGTR----------FDNHPSQRLESV 1127 PG Q P G G + ++ +G+ G R F P ++ E Sbjct: 1030 IPGPQGSPGLPG----DKGAKGEKGQAGPPGIGIPGLRGEKGDQGIAGFPGSPGEKGEKG 1085 Query: 1128 SFNQTGPYNDP-----PGNAFNAPSQGLQFQRHEQIFDSPQG----------PNFNGPHG 1172 S G P PG+ S GL ++ ++ G P GP G Sbjct: 1086 SIGIPGMPGSPGLKGSPGSVGYPGSPGLPGEKGDKGLPGLDGIPGVKGEAGLPGTPGPTG 1145 Query: 1173 PGNQ 1176 P Q Sbjct: 1146 PAGQ 1149 Score = 40.8 bits (94), Expect = 0.010 Identities = 67/228 (29%), Positives = 74/228 (32%), Gaps = 66/228 (28%) Query: 908 RGQP--VGGLRFEGGHGPSGAAIRFDGPHGQPGGGIRFEGPLLQQGVGMRFEGPHGQSVA 965 RG P G + F G GP +GP G PG P L G R GP G S Sbjct: 51 RGLPGLQGVIGFPGMQGP-------EGPQGPPGQKGDTGEPGLPGTKGTR--GPPGAS-- 99 Query: 966 GLRFEGQHNQLGGNLRFEGPHGQPGVGIRFEGPLVQQGGGMRFEGPSVPG--GGLRIEGP 1023 GN G GQ G GP P +PG G GP Sbjct: 100 ---------GYPGNPGLPGIPGQDGP----PGP------------PGIPGCNGTKGERGP 134 Query: 1024 LGQGGPRFEGCHALRFDGQPGQPSLLPRFDGLHGQPGP--------------RFERTPGQ 1069 LG P G F G PG P L G+ G PG F PG Sbjct: 135 LGP--PGLPG-----FAGNPGPPGL----PGMKGDPGEILGHVPGMLLKGERGFPGIPGT 183 Query: 1070 PGPQRFDGPPGQQVQPRFDGVPQRFDGPQHQQASRFDIPLGLQGTRFD 1117 PGP G G P F G P GP + + L QG + D Sbjct: 184 PGPPGLPGLQGPVGPPGFTGPPGP-PGPPGPPGEKGQMGLSFQGPKGD 230 Score = 33.1 bits (74), Expect = 2.1 Identities = 48/169 (28%), Positives = 63/169 (37%), Gaps = 26/169 (15%) Query: 1034 CHALRFD-GQPGQPSL-----LPRFDGLHGQPGPRFER----TPGQPGPQRFDGPPGQQV 1083 CH ++ G+ G P L P G G GP ++ PG PG + GPPG Sbjct: 41 CHGVKGQKGERGLPGLQGVIGFPGMQGPEGPQGPPGQKGDTGEPGLPGTKGTRGPPGASG 100 Query: 1084 QPRFDGVP--QRFDGPQHQQASRFDIPLGLQGTRFDNHP--SQRLESVSFNQ-----TGP 1134 P G+P DGP IP G GT+ + P L + N G Sbjct: 101 YPGNPGLPGIPGQDGPPGPPG----IP-GCNGTKGERGPLGPPGLPGFAGNPGPPGLPGM 155 Query: 1135 YNDPPGNAFNAPSQGLQFQR-HEQIFDSPQGPNFNGPHGP-GNQSFSNP 1181 DP + P L+ +R I +P P G GP G F+ P Sbjct: 156 KGDPGEILGHVPGMLLKGERGFPGIPGTPGPPGLPGLQGPVGPPGFTGP 204 >gi|32895368 alpha 1 type VIII collagen precursor [Homo sapiens] Length = 744 Score = 100 bits (250), Expect = 8e-21 Identities = 125/371 (33%), Positives = 155/371 (41%), Gaps = 64/371 (17%) Query: 778 PRIDGPPTPASLRFDGSPGQMGGGGPLRFEGPQGQLGGGCPLRFEGPPGPVGTPLRFEGP 837 P + GPP P L G PG G F GPQG LG GP GP+G P +GP Sbjct: 257 PGMHGPPGPVGLPGVGKPGVTG------FPGPQGPLGKPGAPGEPGPQGPIGVP-GVQGP 309 Query: 838 IGQAGGGGFRFEGSPGLRFEGSPGGLRFEG-------PGGQPVGGLRFEGHRG-QPVGGL 889 G G G +G PG G PGG +G PG +G F G +G + +GG+ Sbjct: 310 PGIPGIGKPGQDGIPGQ--PGFPGGKGEQGLPGLPGPPGLPGIGKPGFPGPKGDRGMGGV 367 Query: 890 RFE-GPHGQ--PVGGLRFDNPRGQPVGGLRFEGGHGPSGAAIRFDGPHGQPGGGIRFEGP 946 GP G+ P+G P G+P G G GP G AI F GP G+ GG + +GP Sbjct: 368 PGALGPRGEKGPIGAPGIGGPPGEP-GLPGIPGPMGPPG-AIGFPGPKGE-GGIVGPQGP 424 Query: 947 LLQQG-VGMR-FEGPHG----QSVAGLRF-------EGQHNQLG-----GNLRFEGPHGQ 988 +G G++ F G G G+R +G+ Q G G GP G+ Sbjct: 425 PGPKGEPGLQGFPGKPGFLGEVGPPGMRGLPGPIGPKGEAGQKGVPGLPGVPGLLGPKGE 484 Query: 989 PGV--GIRFEGPLVQQGGGMRFEGPSVPGGGLRIEGPLGQGGPRFEGCHALRFDGQPGQP 1046 PG+ +GP G G GPS P G I GP G+ G G PG P Sbjct: 485 PGIPGDQGLQGPPGIPGIG----GPSGPIGPPGIPGPKGEPG----------LPGPPGFP 530 Query: 1047 SL-LPRFDGLHGQPGPRFERTPGQPGPQRFDGPPGQQVQPRFDGVPQRF-DGPQHQQASR 1104 + P GLHG PG PG GPQ G PG P G P P Q Sbjct: 531 GIGKPGVAGLHGPPG-----KPGALGPQGQPGLPGPPGPPGPPGPPAVMPPTPPPQGEYL 585 Query: 1105 FDIPLGLQGTR 1115 D+ LG+ G + Sbjct: 586 PDMGLGIDGVK 596 Score = 86.3 bits (212), Expect = 2e-16 Identities = 135/405 (33%), Positives = 158/405 (39%), Gaps = 95/405 (23%) Query: 787 ASLRFDGSPGQMGGGGPLRFEGPQGQLGGGCPLRFEGPPGPVGTPLRFEGPIGQAGGGGF 846 ASLR G G G GP GP G G G P +G PGP G P +G+ G G Sbjct: 114 ASLR--GEQGPRGEPGPRGPPGPPGLPGHGIP-GIKGKPGPQGYP-----GVGKPGMPG- 164 Query: 847 RFEGSPGLRFEGSPGGLRFEGPGGQPVGGLRFEGHRGQPVGGLRFEGPHGQPVGGLRFDN 906 G PG G PG G G+ +G + G +G P GPHG P G+ Sbjct: 165 -MPGKPGAM--GMPGAKGEIGQKGE-IGPMGIPGPQGPP-------GPHGLP--GI---- 207 Query: 907 PRGQPVGGLRFEGGHGPSGAAIRFDGPHGQPG-GGIRFEGPLLQQGVGMRFEGPHGQSVA 965 G+P GG G GP G GP G PG G+R GP +G GM P V Sbjct: 208 --GKP-GGPGLPGQPGPKGDR----GPKGLPGPQGLR--GPKGDKGFGM----PGAPGVK 254 Query: 966 GLRFEGQHNQLGGNLRFEGPHGQPGVG----IRFEGPLVQQGGGMRFEGPSVPGGGLRIE 1021 G G H GP G PGVG F GP QG + P PG + Sbjct: 255 GP--PGMHGP-------PGPVGLPGVGKPGVTGFPGP---QGPLGKPGAPGEPGP----Q 298 Query: 1022 GPLG----QGGPRFEGCHALRFDGQPGQPSLL--PRFDGLHGQPGPRFERTPGQPGPQRF 1075 GP+G QG P G DG PGQP GL G PGP PG PG + Sbjct: 299 GPIGVPGVQGPPGIPGIGKPGQDGIPGQPGFPGGKGEQGLPGLPGP-----PGLPGIGK- 352 Query: 1076 DGPPGQQVQPRFDGVPQRFDGPQHQQASRFDIPLGLQGTRFDNHPSQ-RLESVSFNQTGP 1134 G PG + GVP GP+ ++ P+G G P + L + GP Sbjct: 353 PGFPGPKGDRGMGGVPGAL-GPRGEKG-----PIGAPG--IGGPPGEPGLPGI----PGP 400 Query: 1135 YNDPPGNAFNAPSQGLQFQRHEQIFDSPQGPNFNGPHG-PGNQSF 1178 P F P + E PQGP GP G PG Q F Sbjct: 401 MGPPGAIGFPGP-------KGEGGIVGPQGP--PGPKGEPGLQGF 436 Score = 85.9 bits (211), Expect = 3e-16 Identities = 123/390 (31%), Positives = 146/390 (37%), Gaps = 91/390 (23%) Query: 778 PRIDGPPTPASLR------FDGSPGQMGGGGPLRFEGPQGQLGGGCPLRFEGPPGPVGT- 830 P I G P P G PG+ G G +G GQ G P+ GP GP G Sbjct: 143 PGIKGKPGPQGYPGVGKPGMPGMPGKPGAMGMPGAKGEIGQKGEIGPMGIPGPQGPPGPH 202 Query: 831 ------------------------PLRFEGP---IGQAGGGGFRFEGSPGLRFE------ 857 P GP G G GF G+PG++ Sbjct: 203 GLPGIGKPGGPGLPGQPGPKGDRGPKGLPGPQGLRGPKGDKGFGMPGAPGVKGPPGMHGP 262 Query: 858 ---------GSPGGLRFEGPGGQPVGGLRFEGHRGQ--PVGGLRFEGPHGQP-VGGLRFD 905 G PG F GP G P+G G G P+G +GP G P +G D Sbjct: 263 PGPVGLPGVGKPGVTGFPGPQG-PLGKPGAPGEPGPQGPIGVPGVQGPPGIPGIGKPGQD 321 Query: 906 NPRGQPVGGLRFEGGHGPSGAAIRFDGPHGQPG-GGIRFEGPLLQQGVGMRFEGPHGQSV 964 GQP F GG G G GP G PG G F GP +G+G G G Sbjct: 322 GIPGQP----GFPGGKGEQGLP-GLPGPPGLPGIGKPGFPGPKGDRGMG----GVPG--- 369 Query: 965 AGLRFEGQHNQLGGNLRFEGPHGQPGV-GIRFEGPLVQQGGGMRFEGPSVPGGGLRIEGP 1023 L G+ +G GP G+PG+ GI GP+ G + F GP GG I GP Sbjct: 370 -ALGPRGEKGPIGAP-GIGGPPGEPGLPGI--PGPM-GPPGAIGFPGPKGEGG---IVGP 421 Query: 1024 LGQGGPRFEGCHALRFDGQPGQPSLLPRFDGLHGQPGPRFERTPGQPGPQRFDGPPGQQV 1083 G GP+ E G PG+P L G G PG R G PGP G GQ+ Sbjct: 422 QGPPGPKGEP----GLQGFPGKPGFL----GEVGPPGMR-----GLPGPIGPKGEAGQKG 468 Query: 1084 QPRFDGVPQRFDGPQHQQASRFDIPLGLQG 1113 P GVP GP+ + D GLQG Sbjct: 469 VPGLPGVPGLL-GPKGEPGIPGD--QGLQG 495 Score = 65.1 bits (157), Expect = 5e-10 Identities = 75/239 (31%), Positives = 95/239 (39%), Gaps = 51/239 (21%) Query: 885 PVGGLRFE-GPHGQPVGGLRFDNPRGQPVGGLRFEGGHGPSGAAIRFDGPHGQPGGGIRF 943 P+ LR E GP G+P PRG P G GHG G + GP G PG G Sbjct: 112 PLASLRGEQGPRGEP-------GPRGPP--GPPGLPGHGIPGIKGK-PGPQGYPGVG--- 158 Query: 944 EGPLLQQGVGMRFEGPHGQSVAGLRFE-GQHNQLG-----GNLRFEGPHGQPGVGIRFEG 997 + G+ P + G + E GQ ++G G GPHG PG+G Sbjct: 159 -----KPGMPGMPGKPGAMGMPGAKGEIGQKGEIGPMGIPGPQGPPGPHGLPGIG----- 208 Query: 998 PLVQQGGGMRFEGPSVPGGGLRIEGPLGQGGPR-FEGCHALRFDGQPGQPSLLPRFDGLH 1056 + GG G P G GP G GP+ G + G PG P + G+H Sbjct: 209 ----KPGGPGLPGQPGPKGD---RGPKGLPGPQGLRGPKGDKGFGMPGAPGVKGP-PGMH 260 Query: 1057 GQPGPRFERTPGQPGPQRFDGPPGQQVQPRFDGVPQRFDGPQHQQASRFDIPLGLQGTR 1115 G PGP G+PG F GP G +P G P GPQ P+G+ G + Sbjct: 261 GPPGPVGLPGVGKPGVTGFPGPQGPLGKPGAPGEP----GPQG--------PIGVPGVQ 307 Score = 48.1 bits (113), Expect = 6e-05 Identities = 52/157 (33%), Positives = 61/157 (38%), Gaps = 20/157 (12%) Query: 783 PPTPASLRFDGSPGQMGGGGPLRFEGPQGQLGGGCPLRFEGPPGPVGTPLRFEGPIGQAG 842 P P L G PG G G +GP G G G P GPPG GP G+ G Sbjct: 473 PGVPGLLGPKGEPGIPGDQG---LQGPPGIPGIGGPSGPIGPPG-------IPGPKGEPG 522 Query: 843 GGGFRFEGSPGLRFEGSPGGLRFEGPGGQPVGGLRFEGHRGQPVGGLRFEGPHGQPVGGL 902 G PG G PG GP G+P G L +G G P G GP G P Sbjct: 523 -----LPGPPGFPGIGKPGVAGLHGPPGKP-GALGPQGQPGLP-GPPGPPGPPGPPAVMP 575 Query: 903 RFDNPRGQ--PVGGLRFEGGHGPSGAAIRFDGPHGQP 937 P+G+ P GL +G P + G +G P Sbjct: 576 PTPPPQGEYLPDMGLGIDGVKPPHAYGAK-KGKNGGP 611 Score = 35.8 bits (81), Expect = 0.33 Identities = 32/82 (39%), Positives = 35/82 (42%), Gaps = 10/82 (12%) Query: 750 PLFDGPSRPSVARDGPTKMIFEGPNKLSPRIDGPPTPASLRFDGSPGQMGGGGPLRFEGP 809 P GPS P GP + GP K P + GPP + G G G G GP Sbjct: 500 PGIGGPSGPI----GPPGI--PGP-KGEPGLPGPPGFPGIGKPGVAGLHGPPGKPGALGP 552 Query: 810 QGQLGGGCPLRFEGPPGPVGTP 831 QGQ G P GPPGP G P Sbjct: 553 QGQPGLPGP---PGPPGPPGPP 571 >gi|17738302 alpha 1 type VIII collagen precursor [Homo sapiens] Length = 744 Score = 100 bits (250), Expect = 8e-21 Identities = 125/371 (33%), Positives = 155/371 (41%), Gaps = 64/371 (17%) Query: 778 PRIDGPPTPASLRFDGSPGQMGGGGPLRFEGPQGQLGGGCPLRFEGPPGPVGTPLRFEGP 837 P + GPP P L G PG G F GPQG LG GP GP+G P +GP Sbjct: 257 PGMHGPPGPVGLPGVGKPGVTG------FPGPQGPLGKPGAPGEPGPQGPIGVP-GVQGP 309 Query: 838 IGQAGGGGFRFEGSPGLRFEGSPGGLRFEG-------PGGQPVGGLRFEGHRG-QPVGGL 889 G G G +G PG G PGG +G PG +G F G +G + +GG+ Sbjct: 310 PGIPGIGKPGQDGIPGQ--PGFPGGKGEQGLPGLPGPPGLPGIGKPGFPGPKGDRGMGGV 367 Query: 890 RFE-GPHGQ--PVGGLRFDNPRGQPVGGLRFEGGHGPSGAAIRFDGPHGQPGGGIRFEGP 946 GP G+ P+G P G+P G G GP G AI F GP G+ GG + +GP Sbjct: 368 PGALGPRGEKGPIGAPGIGGPPGEP-GLPGIPGPMGPPG-AIGFPGPKGE-GGIVGPQGP 424 Query: 947 LLQQG-VGMR-FEGPHG----QSVAGLRF-------EGQHNQLG-----GNLRFEGPHGQ 988 +G G++ F G G G+R +G+ Q G G GP G+ Sbjct: 425 PGPKGEPGLQGFPGKPGFLGEVGPPGMRGLPGPIGPKGEAGQKGVPGLPGVPGLLGPKGE 484 Query: 989 PGV--GIRFEGPLVQQGGGMRFEGPSVPGGGLRIEGPLGQGGPRFEGCHALRFDGQPGQP 1046 PG+ +GP G G GPS P G I GP G+ G G PG P Sbjct: 485 PGIPGDQGLQGPPGIPGIG----GPSGPIGPPGIPGPKGEPG----------LPGPPGFP 530 Query: 1047 SL-LPRFDGLHGQPGPRFERTPGQPGPQRFDGPPGQQVQPRFDGVPQRF-DGPQHQQASR 1104 + P GLHG PG PG GPQ G PG P G P P Q Sbjct: 531 GIGKPGVAGLHGPPG-----KPGALGPQGQPGLPGPPGPPGPPGPPAVMPPTPPPQGEYL 585 Query: 1105 FDIPLGLQGTR 1115 D+ LG+ G + Sbjct: 586 PDMGLGIDGVK 596 Score = 86.3 bits (212), Expect = 2e-16 Identities = 135/405 (33%), Positives = 158/405 (39%), Gaps = 95/405 (23%) Query: 787 ASLRFDGSPGQMGGGGPLRFEGPQGQLGGGCPLRFEGPPGPVGTPLRFEGPIGQAGGGGF 846 ASLR G G G GP GP G G G P +G PGP G P +G+ G G Sbjct: 114 ASLR--GEQGPRGEPGPRGPPGPPGLPGHGIP-GIKGKPGPQGYP-----GVGKPGMPG- 164 Query: 847 RFEGSPGLRFEGSPGGLRFEGPGGQPVGGLRFEGHRGQPVGGLRFEGPHGQPVGGLRFDN 906 G PG G PG G G+ +G + G +G P GPHG P G+ Sbjct: 165 -MPGKPGAM--GMPGAKGEIGQKGE-IGPMGIPGPQGPP-------GPHGLP--GI---- 207 Query: 907 PRGQPVGGLRFEGGHGPSGAAIRFDGPHGQPG-GGIRFEGPLLQQGVGMRFEGPHGQSVA 965 G+P GG G GP G GP G PG G+R GP +G GM P V Sbjct: 208 --GKP-GGPGLPGQPGPKGDR----GPKGLPGPQGLR--GPKGDKGFGM----PGAPGVK 254 Query: 966 GLRFEGQHNQLGGNLRFEGPHGQPGVG----IRFEGPLVQQGGGMRFEGPSVPGGGLRIE 1021 G G H GP G PGVG F GP QG + P PG + Sbjct: 255 GP--PGMHGP-------PGPVGLPGVGKPGVTGFPGP---QGPLGKPGAPGEPGP----Q 298 Query: 1022 GPLG----QGGPRFEGCHALRFDGQPGQPSLL--PRFDGLHGQPGPRFERTPGQPGPQRF 1075 GP+G QG P G DG PGQP GL G PGP PG PG + Sbjct: 299 GPIGVPGVQGPPGIPGIGKPGQDGIPGQPGFPGGKGEQGLPGLPGP-----PGLPGIGK- 352 Query: 1076 DGPPGQQVQPRFDGVPQRFDGPQHQQASRFDIPLGLQGTRFDNHPSQ-RLESVSFNQTGP 1134 G PG + GVP GP+ ++ P+G G P + L + GP Sbjct: 353 PGFPGPKGDRGMGGVPGAL-GPRGEKG-----PIGAPG--IGGPPGEPGLPGI----PGP 400 Query: 1135 YNDPPGNAFNAPSQGLQFQRHEQIFDSPQGPNFNGPHG-PGNQSF 1178 P F P + E PQGP GP G PG Q F Sbjct: 401 MGPPGAIGFPGP-------KGEGGIVGPQGP--PGPKGEPGLQGF 436 Score = 85.9 bits (211), Expect = 3e-16 Identities = 123/390 (31%), Positives = 146/390 (37%), Gaps = 91/390 (23%) Query: 778 PRIDGPPTPASLR------FDGSPGQMGGGGPLRFEGPQGQLGGGCPLRFEGPPGPVGT- 830 P I G P P G PG+ G G +G GQ G P+ GP GP G Sbjct: 143 PGIKGKPGPQGYPGVGKPGMPGMPGKPGAMGMPGAKGEIGQKGEIGPMGIPGPQGPPGPH 202 Query: 831 ------------------------PLRFEGP---IGQAGGGGFRFEGSPGLRFE------ 857 P GP G G GF G+PG++ Sbjct: 203 GLPGIGKPGGPGLPGQPGPKGDRGPKGLPGPQGLRGPKGDKGFGMPGAPGVKGPPGMHGP 262 Query: 858 ---------GSPGGLRFEGPGGQPVGGLRFEGHRGQ--PVGGLRFEGPHGQP-VGGLRFD 905 G PG F GP G P+G G G P+G +GP G P +G D Sbjct: 263 PGPVGLPGVGKPGVTGFPGPQG-PLGKPGAPGEPGPQGPIGVPGVQGPPGIPGIGKPGQD 321 Query: 906 NPRGQPVGGLRFEGGHGPSGAAIRFDGPHGQPG-GGIRFEGPLLQQGVGMRFEGPHGQSV 964 GQP F GG G G GP G PG G F GP +G+G G G Sbjct: 322 GIPGQP----GFPGGKGEQGLP-GLPGPPGLPGIGKPGFPGPKGDRGMG----GVPG--- 369 Query: 965 AGLRFEGQHNQLGGNLRFEGPHGQPGV-GIRFEGPLVQQGGGMRFEGPSVPGGGLRIEGP 1023 L G+ +G GP G+PG+ GI GP+ G + F GP GG I GP Sbjct: 370 -ALGPRGEKGPIGAP-GIGGPPGEPGLPGI--PGPM-GPPGAIGFPGPKGEGG---IVGP 421 Query: 1024 LGQGGPRFEGCHALRFDGQPGQPSLLPRFDGLHGQPGPRFERTPGQPGPQRFDGPPGQQV 1083 G GP+ E G PG+P L G G PG R G PGP G GQ+ Sbjct: 422 QGPPGPKGEP----GLQGFPGKPGFL----GEVGPPGMR-----GLPGPIGPKGEAGQKG 468 Query: 1084 QPRFDGVPQRFDGPQHQQASRFDIPLGLQG 1113 P GVP GP+ + D GLQG Sbjct: 469 VPGLPGVPGLL-GPKGEPGIPGD--QGLQG 495 Score = 65.1 bits (157), Expect = 5e-10 Identities = 75/239 (31%), Positives = 95/239 (39%), Gaps = 51/239 (21%) Query: 885 PVGGLRFE-GPHGQPVGGLRFDNPRGQPVGGLRFEGGHGPSGAAIRFDGPHGQPGGGIRF 943 P+ LR E GP G+P PRG P G GHG G + GP G PG G Sbjct: 112 PLASLRGEQGPRGEP-------GPRGPP--GPPGLPGHGIPGIKGK-PGPQGYPGVG--- 158 Query: 944 EGPLLQQGVGMRFEGPHGQSVAGLRFE-GQHNQLG-----GNLRFEGPHGQPGVGIRFEG 997 + G+ P + G + E GQ ++G G GPHG PG+G Sbjct: 159 -----KPGMPGMPGKPGAMGMPGAKGEIGQKGEIGPMGIPGPQGPPGPHGLPGIG----- 208 Query: 998 PLVQQGGGMRFEGPSVPGGGLRIEGPLGQGGPR-FEGCHALRFDGQPGQPSLLPRFDGLH 1056 + GG G P G GP G GP+ G + G PG P + G+H Sbjct: 209 ----KPGGPGLPGQPGPKGD---RGPKGLPGPQGLRGPKGDKGFGMPGAPGVKGP-PGMH 260 Query: 1057 GQPGPRFERTPGQPGPQRFDGPPGQQVQPRFDGVPQRFDGPQHQQASRFDIPLGLQGTR 1115 G PGP G+PG F GP G +P G P GPQ P+G+ G + Sbjct: 261 GPPGPVGLPGVGKPGVTGFPGPQGPLGKPGAPGEP----GPQG--------PIGVPGVQ 307 Score = 48.1 bits (113), Expect = 6e-05 Identities = 52/157 (33%), Positives = 61/157 (38%), Gaps = 20/157 (12%) Query: 783 PPTPASLRFDGSPGQMGGGGPLRFEGPQGQLGGGCPLRFEGPPGPVGTPLRFEGPIGQAG 842 P P L G PG G G +GP G G G P GPPG GP G+ G Sbjct: 473 PGVPGLLGPKGEPGIPGDQG---LQGPPGIPGIGGPSGPIGPPG-------IPGPKGEPG 522 Query: 843 GGGFRFEGSPGLRFEGSPGGLRFEGPGGQPVGGLRFEGHRGQPVGGLRFEGPHGQPVGGL 902 G PG G PG GP G+P G L +G G P G GP G P Sbjct: 523 -----LPGPPGFPGIGKPGVAGLHGPPGKP-GALGPQGQPGLP-GPPGPPGPPGPPAVMP 575 Query: 903 RFDNPRGQ--PVGGLRFEGGHGPSGAAIRFDGPHGQP 937 P+G+ P GL +G P + G +G P Sbjct: 576 PTPPPQGEYLPDMGLGIDGVKPPHAYGAK-KGKNGGP 611 Score = 35.8 bits (81), Expect = 0.33 Identities = 32/82 (39%), Positives = 35/82 (42%), Gaps = 10/82 (12%) Query: 750 PLFDGPSRPSVARDGPTKMIFEGPNKLSPRIDGPPTPASLRFDGSPGQMGGGGPLRFEGP 809 P GPS P GP + GP K P + GPP + G G G G GP Sbjct: 500 PGIGGPSGPI----GPPGI--PGP-KGEPGLPGPPGFPGIGKPGVAGLHGPPGKPGALGP 552 Query: 810 QGQLGGGCPLRFEGPPGPVGTP 831 QGQ G P GPPGP G P Sbjct: 553 QGQPGLPGP---PGPPGPPGPP 571 >gi|110735435 collagen, type V, alpha 3 preproprotein [Homo sapiens] Length = 1745 Score = 100 bits (248), Expect = 1e-20 Identities = 135/431 (31%), Positives = 159/431 (36%), Gaps = 92/431 (21%) Query: 764 GPTKMIFE-GPNKL-SPRIDGPPT--PASLRFDGSPGQMGGGGPLRFEGPQGQLGGGCPL 819 GPT E GP L PR PT P DG+PG G GP GP GQ G Sbjct: 590 GPTGQAGEPGPRGLLGPRGSPGPTGRPGVTGIDGAPGAKGNVGPPGEPGPPGQQGNHGSQ 649 Query: 820 RFEGPPGPVGTPLRFEGPIGQAGGGGFRFEGSPGLRFEGSPGGLRFEGPGGQPVGGLRFE 879 GP G +GTP G+ G G+PG+ G PG +GP G P Sbjct: 650 GLPGPQGLIGTP-------GEKGP-----PGNPGI--PGLPGS---DGPLGHP------- 685 Query: 880 GHRGQPVGGLRFEGPHGQPVGGLRFDNPRG----------QPVGGLRFEGGHGPSGAAIR 929 GH G P G +GP G G + PRG Q G + E G + Sbjct: 686 GHEG-PTGEKGAQGPPGS-AGPPGYPGPRGVKGTSGNRGLQGEKGEKGEDGFPGFKGDVG 743 Query: 930 FDGPHGQPGGGIRFEGPLLQQGVGMRFEGPHGQSVAGLRFEGQHNQLGGNLRFEGPHGQP 989 G G+PG GP + G EGP GQ+ G EGP G Sbjct: 744 LKGDQGKPGA----PGPRGEDGP----EGPKGQA--------------GQAGEEGPPGSA 781 Query: 990 GVGIRFEGPLVQQGGGMRFEGPSVPGGGLRIEGPLGQGGPRFEGCHALRFDGQPGQPSLL 1049 G + P G + G P G + GPLG G + + G+ GQP L Sbjct: 782 GEKGKLGVP-----GLPGYPGRPGPKGSIGFPGPLGPIGEKGK-------SGKTGQPGL- 828 Query: 1050 PRFDGLHGQPGPRFERTPGQPGPQRFDGPPGQQVQPRFDGVPQRFDGPQHQQASRFDIPL 1109 +G G PG R ER GQPG GP G Q G+P P Q F P Sbjct: 829 ---EGERGPPGSRGER--GQPGATGQPGPKGDVGQDGAPGIPGEKGLPGLQGPPGFPGPK 883 Query: 1110 GLQGTRFDN----HPSQRLESVSFNQTGPYNDPPGNAFNAPSQGLQFQRHEQIFDSPQGP 1165 G G + + HP QR E QTG PPG A QG + P GP Sbjct: 884 GPPGHQGKDGRPGHPGQRGELGFQGQTG----PPGPAGVLGPQGKTGEVGPLGERGPPGP 939 Query: 1166 NFNGPHGPGNQ 1176 P PG Q Sbjct: 940 ----PGPPGEQ 946 Score = 91.3 bits (225), Expect = 7e-18 Identities = 120/386 (31%), Positives = 145/386 (37%), Gaps = 101/386 (26%) Query: 781 DGPPTPASLRFD-GSPGQMGGGGPLRFEGPQGQLGGGCPLRFEGPPGPVGTP-------- 831 DG P R + G GQ G GP GPQG+ G PL GPPGP G P Sbjct: 892 DGRPGHPGQRGELGFQGQTGPPGPAGVLGPQGKTGEVGPLGERGPPGPPGPPGEQGLPGL 951 Query: 832 ---------LRFEGPIGQAGGGGFR-FEGSPGLRFEGSPGGLRFE-GPGGQPVGGLRFEG 880 L GP+G+ G G R F G G + P GL+ + GP G PVG G Sbjct: 952 EGREGAKGELGPPGPLGKEGPAGLRGFPGPKGGPGDPGPTGLKGDKGPPG-PVGANGSPG 1010 Query: 881 HRGQ--PVGGLRFEGPHGQ--PVGGLRFDNPRGQ--------------PVGGLRFEGGHG 922 RG P GG+ G G PVG RG+ P+G L G G Sbjct: 1011 ERGPLGPAGGIGLPGQSGSEGPVGPAGKKGSRGERGPPGPTGKDGIPGPLGPLGPPGAAG 1070 Query: 923 PSG-------------AAIRFD----GPHGQPG--GGIRFEGPLLQQGVGMRFEGPHG-- 961 PSG + D GP GQPG G GP G R GP G Sbjct: 1071 PSGEEGDKGDVGAPGHKGSKGDKGDAGPPGQPGIRGPAGHPGPPGADGAQGR-RGPPGLF 1129 Query: 962 --QSVAGLR-------------FEGQHNQLG--GNLRFEGPHGQPGVGIRFEGPLVQQGG 1004 + G+R G + G G++ GPHG P GP QG Sbjct: 1130 GQKGDDGVRGFVGVIGPPGLQGLPGPPGEKGEVGDVGSMGPHGAP-------GPRGPQGP 1182 Query: 1005 GMRFEGPSVPGGGLRIEGPLGQGGPRFEGCHALRFDGQPGQPSLLPRFDGLHGQPGPRFE 1064 P +P GG+ G +G+ G R + G PG P G G PGP+ + Sbjct: 1183 TGSEGTPGLP-GGVGQPGAVGEKGERGDA-------GDPGPP-------GAPGIPGPKGD 1227 Query: 1065 -RTPGQPGPQRFDGPPGQQVQPRFDG 1089 G GP GPPG++ P DG Sbjct: 1228 IGEKGDSGPSGAAGPPGKKGPPGEDG 1253 Score = 85.5 bits (210), Expect = 4e-16 Identities = 128/380 (33%), Positives = 154/380 (40%), Gaps = 89/380 (23%) Query: 754 GPSRPSVARDGPTKMI-FEGPNKLSPRIDGPP-------TPASLRFDGSPGQMGGGGPLR 805 GP P + ++GP + F GP K P GP P + +GSPG+ G GP Sbjct: 962 GPPGP-LGKEGPAGLRGFPGP-KGGPGDPGPTGLKGDKGPPGPVGANGSPGERGPLGPAG 1019 Query: 806 FEGPQGQLGGGCPL--------RFE-GPPGPVGT-----PLRFEGPIGQAGGGGFRFE-- 849 G GQ G P+ R E GPPGP G PL GP G AG G + Sbjct: 1020 GIGLPGQSGSEGPVGPAGKKGSRGERGPPGPTGKDGIPGPLGPLGPPGAAGPSGEEGDKG 1079 Query: 850 --GSPGLRFEGSPGGLRFEGPGGQPVGGLRFE-GHRGQPVGGLRFEGPHGQP--VGGLRF 904 G+PG +GS G GP GQP G+R GH G P G +G G P G Sbjct: 1080 DVGAPG--HKGSKGDKGDAGPPGQP--GIRGPAGHPGPP-GADGAQGRRGPPGLFGQKGD 1134 Query: 905 DNPRG--QPVGGLRFEGGHGPSGAA-----IRFDGPHGQPG-----GGIRFEG-PLLQQG 951 D RG +G +G GP G + GPHG PG G EG P L G Sbjct: 1135 DGVRGFVGVIGPPGLQGLPGPPGEKGEVGDVGSMGPHGAPGPRGPQGPTGSEGTPGLPGG 1194 Query: 952 VGMRFEGPHGQSVAGLRFEGQHNQLGGNLRFEGPHGQPGVGIRFEGPLVQQGGGMRFEGP 1011 VG G G+ +G+ G GP G PG+ GP G + +G Sbjct: 1195 VGQ--PGAVGE-------KGERGDAGD----PGPPGAPGI----PGPK----GDIGEKGD 1233 Query: 1012 SVPGGGLRIEGPLGQGGPRFEGCHALRFDGQPGQPSLLPRFDGLHGQPGPRFERTPGQPG 1071 S P G GP G+ GP E DG G S+ P GL G GP PG PG Sbjct: 1234 SGPSGAA---GPPGKKGPPGE-------DGAKG--SVGPT--GLPGDLGP-----PGDPG 1274 Query: 1072 PQRFDGPPGQQVQPRFDGVP 1091 DG PG++ P G P Sbjct: 1275 VSGIDGSPGEKGDPGDVGGP 1294 Score = 84.7 bits (208), Expect = 6e-16 Identities = 147/468 (31%), Positives = 178/468 (38%), Gaps = 85/468 (18%) Query: 754 GPSRPSVARDGPTKMIFEGP-----NKLSPRIDGPPTPASLRFDGSPGQMGGGGPLRFEG 808 GP P+ P + EGP K S GPP P DG PG +G GP G Sbjct: 1013 GPLGPAGGIGLPGQSGSEGPVGPAGKKGSRGERGPPGPTGK--DGIPGPLGPLGPPGAAG 1070 Query: 809 PQGQLGG----GCPLRF--------EGPPGPVGT--PLRFEGPIGQAGGGGFRFEGSPGL 854 P G+ G G P GPPG G P GP G G G R G PGL Sbjct: 1071 PSGEEGDKGDVGAPGHKGSKGDKGDAGPPGQPGIRGPAGHPGPPGADGAQGRR--GPPGL 1128 Query: 855 RFEGSPGGLR-FEGPGGQPVGGLRF----EGHRGQPVGGLRFEGPHGQPVGGLRFDNPRG 909 + G+R F G G P GL+ G +G+ VG + GPHG P G P G Sbjct: 1129 FGQKGDDGVRGFVGVIGPP--GLQGLPGPPGEKGE-VGDVGSMGPHGAP-GPRGPQGPTG 1184 Query: 910 QPVGGLRFEGGHGPSGAA----IRFD----GPHGQPG-----GGIRFEGPLLQQGVG--M 954 G GG G GA R D GP G PG G I +G G Sbjct: 1185 SE-GTPGLPGGVGQPGAVGEKGERGDAGDPGPPGAPGIPGPKGDIGEKGDSGPSGAAGPP 1243 Query: 955 RFEGPHGQSVAGLRFEGQHNQLGGNLRFEGPHGQPGVGIRFEGPLVQQGGGMRFEGPSVP 1014 +GP G+ G + L G+L GP G PGV +G ++G GP P Sbjct: 1244 GKKGPPGED--GAKGSVGPTGLPGDL---GPPGDPGVS-GIDGSPGEKGDPGDVGGPGPP 1297 Query: 1015 G--GGLRIEGPLGQGGPRFEGCHALRFDGQPGQPSLLPRFDGLHGQPGPRFERTPGQPGP 1072 G G GP G+ GP H R +G+ G+ G G+PGP + PG+ GP Sbjct: 1298 GASGEPGAPGPPGKRGP---SGHMGR-EGREGEK-------GAKGEPGP--DGPPGRTGP 1344 Query: 1073 QRFDGPPGQQVQPRFDGVPQRFD-----GPQHQQASRFDI-PLGLQGTRFDNHPSQRLES 1126 GPPG+ G+P G Q + P GL G + D P + E Sbjct: 1345 MGARGPPGRVGPEGLRGIPGPVGEPGLLGAPGQMGPPGPLGPSGLPGLKGDTGP--KGEK 1402 Query: 1127 VSFNQTGPYNDPPGNAFNAPSQGLQFQRHEQIFDSPQGPNFN-GPHGP 1173 G PPG A QGL P GP + GP GP Sbjct: 1403 GHIGLIGLIG-PPGEAGEKGDQGLPG------VQGPPGPKGDPGPPGP 1443 Score = 80.9 bits (198), Expect = 9e-15 Identities = 104/308 (33%), Positives = 127/308 (41%), Gaps = 55/308 (17%) Query: 805 RFEGPQGQLGGGCPLRFEGPPGPVGTPLRFEGPIGQAGGGGFRFEGSPGLRFEGSPGG-- 862 +FEGP G G + GPPGP G P GP G AG G G G+R G PG Sbjct: 389 QFEGPPGAPGPQGVVGPSGPPGPPGFP-GDPGPPGPAGLPG--IPGIDGIR--GPPGTVI 443 Query: 863 -LRFEGPGGQPVG-GLRFEGHRGQPV---GGLRFEGPHGQPVGGLRFDNPRGQP--VGGL 915 + F+ GG G + F+ + Q V L +GP G PVG P G P G Sbjct: 444 MMPFQFAGGSFKGPPVSFQQAQAQAVLQQTQLSMKGPPG-PVGLTGRPGPVGLPGHPGLK 502 Query: 916 RFEGGHGPSGAAIRFDGPHGQPGGGIRFEGPLLQQGVGMRFE-GPHG-QSVAGL-RFEGQ 972 EG GP G GPHG PG + P G+ + GP G + GL G+ Sbjct: 503 GEEGAEGPQGPR-GLQGPHGPPGRVGKMGRPGADGARGLPGDTGPKGDRGFDGLPGLPGE 561 Query: 973 HNQLG--GNLRFEGPHGQPGVGIRFEGPLVQQGGGMRFEGPSVPGGGLRIEGPLGQGGPR 1030 Q G G++ GP G+ G ++G EGP P G GP G GPR Sbjct: 562 KGQRGDFGHVGQPGPPGEDG----------ERGA----EGPPGPTGQAGEPGPRGLLGPR 607 Query: 1031 FEGCHALRFDGQPGQPSLLPRFDGLHGQPGPRFERTPGQPGPQRFDGPPGQQVQPRFDGV 1090 G PG P+ P G+ G PG + G GP GPPGQQ G+ Sbjct: 608 ----------GSPG-PTGRPGVTGIDGAPGAK-----GNVGPPGEPGPPGQQGNHGSQGL 651 Query: 1091 PQRFDGPQ 1098 P GPQ Sbjct: 652 P----GPQ 655 Score = 73.6 bits (179), Expect = 1e-12 Identities = 112/360 (31%), Positives = 142/360 (39%), Gaps = 63/360 (17%) Query: 782 GPPTPASLRFDGSPGQMGGGGPLRFEGPQGQLGGGCPLRFEGPPGPVGTPLRFEGPIGQA 841 GPP L G PG+ G G + GP G G P +GP G GTP G +GQ Sbjct: 1145 GPPGLQGL--PGPPGEKGEVGDVGSMGPHGAPGPRGP---QGPTGSEGTP-GLPGGVGQP 1198 Query: 842 GGGGFRFE----------GSPGLRFEGSPGGLRFEGPGGQPVGGLRFEGHRGQPV--GGL 889 G G + E G+PG+ G G + +G G P G G +G P G Sbjct: 1199 GAVGEKGERGDAGDPGPPGAPGI--PGPKGDIGEKGDSG-PSGAAGPPGKKGPPGEDGAK 1255 Query: 890 RFEGPHGQPVGGLRFDNPRGQPVGGLRFEGGHGPSGAAIRFDGPHGQPG--GGIRFEGPL 947 GP G P G L P G P G +G G G GP G PG G GP Sbjct: 1256 GSVGPTGLP-GDL---GPPGDP-GVSGIDGSPGEKGDPGDVGGP-GPPGASGEPGAPGPP 1309 Query: 948 LQQGVG--MRFEGPHGQSVAGLRFEGQHNQLG-----GNLRFEGPHGQPGV-GIR-FEGP 998 ++G M EG G+ A +G+ G G + GP G+ G G+R GP Sbjct: 1310 GKRGPSGHMGREGREGEKGA----KGEPGPDGPPGRTGPMGARGPPGRVGPEGLRGIPGP 1365 Query: 999 LVQQG--GGMRFEGPSVPGGGLRIEGPLGQGGPRFEGCHA--LRFDGQPGQPSLL--PRF 1052 + + G G GP P G + G G GP+ E H + G PG+ Sbjct: 1366 VGEPGLLGAPGQMGPPGPLGPSGLPGLKGDTGPKGEKGHIGLIGLIGPPGEAGEKGDQGL 1425 Query: 1053 DGLHGQPGPRFERTP-------GQPGPQRFDGPPGQQ--------VQPRFDGVPQRFDGP 1097 G+ G PGP+ + P G PGP GP GQ+ + PR D P GP Sbjct: 1426 PGVQGPPGPKGDPGPPGPIGSLGHPGPPGVAGPLGQKGSKGSPGSMGPRGDTGPAGPPGP 1485 Score = 69.7 bits (169), Expect = 2e-11 Identities = 100/319 (31%), Positives = 118/319 (36%), Gaps = 63/319 (19%) Query: 754 GPSRPSVARDGPTKMIFEGPNKLSPRIDGPPTPASLRFDGSPGQMGGGGPLRFEGPQGQL 813 G S PS A P K G + + P L G PG G G +G G + Sbjct: 1232 GDSGPSGAAGPPGKKGPPGEDGAKGSVGPTGLPGDLGPPGDPGVSGIDGSPGEKGDPGDV 1291 Query: 814 GGGCPLRFEGPPGPVGTPLRFEGPIGQAGGGGFRFEGSPGLRFEGSPGGLRFEGPGGQPV 873 GG P G PG G P + GP G G G EG G + E P G P Sbjct: 1292 GGPGPPGASGEPGAPGPPGK-RGPSGHMGREG--REGEKGAKGEPGPDG---------PP 1339 Query: 874 GGLRFEGHRGQPVGGLRFEGPHGQPVGGLRFDNPRGQPVGGLRFEGGHGPSGAAIRFDGP 933 G G RG P G + EG G P P G+P G L G GP G GP Sbjct: 1340 GRTGPMGARGPP-GRVGPEGLRGIP-------GPVGEP-GLLGAPGQMGPPGPL----GP 1386 Query: 934 HGQPGGGIRFEGPLLQQGVGMRFEGPHGQSVAGLRFEGQHNQLGGNLRFEGPHGQPGVGI 993 G PG L+ G + E H + + G+ + +G G PGV Sbjct: 1387 SGLPG---------LKGDTGPKGEKGHIGLIGLIGPPGEAGE-------KGDQGLPGV-- 1428 Query: 994 RFEGPLVQQGGGMRFEGPSVPGGGLRIEGPLGQGGPRFEGCHALRFDGQPGQP-SLLPRF 1052 +GP +G GP P G L GP G GP L G G P S+ PR Sbjct: 1429 --QGPPGPKGD----PGPPGPIGSLGHPGPPGVAGP-------LGQKGSKGSPGSMGPRG 1475 Query: 1053 D-GLHGQPGPRFERTPGQP 1070 D G G PGP PG P Sbjct: 1476 DTGPAGPPGP-----PGAP 1489 Score = 47.0 bits (110), Expect = 1e-04 Identities = 50/175 (28%), Positives = 60/175 (34%), Gaps = 45/175 (25%) Query: 1005 GMRFEGPSVPGGGLRIEGPLGQGGPRFEGCHALRFDGQPGQPSLLPRFDGLHGQPGPRFE 1064 G +FEGP G + GP G GP G PG P G PGP Sbjct: 387 GQQFEGPPGAPGPQGVVGPSGPPGP----------PGFPGDP----------GPPGP--A 424 Query: 1065 RTPGQPGPQRFDGPPGQQVQPRFDGVPQRFDGPQHQQASRFDIPLGLQGTRFDNHPSQRL 1124 PG PG GPPG + F F GP P+ Q + L Sbjct: 425 GLPGIPGIDGIRGPPGTVIMMPFQFAGGSFKGP----------PVSFQQAQ----AQAVL 470 Query: 1125 ESVSFNQTGP-----YNDPPGNAFNAPSQGLQFQRHEQIFDSPQGP-NFNGPHGP 1173 + + GP PG GL + E+ + PQGP GPHGP Sbjct: 471 QQTQLSMKGPPGPVGLTGRPGPVGLPGHPGL---KGEEGAEGPQGPRGLQGPHGP 522 >gi|110349772 alpha 1 type I collagen preproprotein [Homo sapiens] Length = 1464 Score = 98.6 bits (244), Expect = 4e-20 Identities = 142/448 (31%), Positives = 171/448 (38%), Gaps = 89/448 (19%) Query: 754 GPSRPSVARDGPTKMIFEGPNKLSPRIDGPPTPASLRFDGSPGQMGGGGPLRFEGPQGQL 813 G + P A P K +G L+ I GPP PA G+PG G GP GP G Sbjct: 746 GDAGPKGADGSPGK---DGVRGLTGPI-GPPGPA-----GAPGDKGESGPSGPAGPTGAR 796 Query: 814 GGGCPLRFEGPPGPVGTPLRFEGPIGQAGGGGFRFE-GSPGLRFEGSPGGLRFEGPGGQP 872 G GPPGP G F GP G G G + E G G + + P G GP G P Sbjct: 797 GAPGDRGEPGPPGPAG----FAGPPGADGQPGAKGEPGDAGAKGDAGPPGP--AGPAGPP 850 Query: 873 -----VGGLRFEGHRGQ--PVGGLRFEGPHGQ--PVGGLRFDNPRGQPVGGLRFEGGHGP 923 VG +G RG P G F G G+ P G P G P G EGG GP Sbjct: 851 GPIGNVGAPGAKGARGSAGPPGATGFPGAAGRVGPPGPSGNAGPPGPP-GPAGKEGGKGP 909 Query: 924 SGAAIRFDGPHGQPG--GGIRFEGPLLQQGVGMRFEGPHG-------QSVAGLR----FE 970 G GP G+PG G GP ++G +GP G Q +AG R Sbjct: 910 RGET----GPAGRPGEVGPPGPPGPAGEKG-SPGADGPAGAPGTPGPQGIAGQRGVVGLP 964 Query: 971 GQHNQLGGNLRFEGPHGQPGVGIRFEGPLVQQGGGMRFEGPSVPGGGLRIEGPLGQGGPR 1030 GQ + G GP G+PG +GP G GP P G + GP G+ G Sbjct: 965 GQRGERGFP-GLPGPSGEPGK----QGP----SGASGERGPPGPMGPPGLAGPPGESGR- 1014 Query: 1031 FEGCHALRFDGQPGQPSLLPRFDGLHGQPGPRFERTPGQPGPQRFDGP--PGQQVQPRFD 1088 EG A +G PG+ P G G+ GP PG PG GP P + R + Sbjct: 1015 -EG--APGAEGSPGRDG-SPGAKGDRGETGP--AGPPGAPGAPGAPGPVGPAGKSGDRGE 1068 Query: 1089 GVPQRFDGPQHQQASRFDIPLGLQGTRFDNHPSQRLESVSFNQTGPYNDPPGNAFNAPSQ 1148 P GP +R P G QG R D +TG D + Sbjct: 1069 TGPAGPAGPVGPVGARG--PAGPQGPRGDK-----------GETGEQGD----------R 1105 Query: 1149 GLQFQRHEQIFDSPQGPNFNGPHGPGNQ 1176 G++ R P GP P PG Q Sbjct: 1106 GIKGHRGFSGLQGPPGP----PGSPGEQ 1129 Score = 88.2 bits (217), Expect = 6e-17 Identities = 112/343 (32%), Positives = 137/343 (39%), Gaps = 54/343 (15%) Query: 780 IDGPPTPASLRFDGSPGQMGGGGPLRFEGPQGQLG---GGCPLRFEGPPGPVGTPLRFEG 836 + GP P+ R G PG G GP F+GP G+ G P+ GPPGP G G Sbjct: 177 VPGPMGPSGPR--GLPGPPGAPGPQGFQGPPGEPGEPGASGPMGPRGPPGPPGK----NG 230 Query: 837 PIGQAGGGGFRFEGSPGLRFEGSPGGLR-FEGPGGQPVGGLRFEGHRG-QPVGGLRFE-- 892 G+AG G PG R P G R G G P +GHRG + G + + Sbjct: 231 DDGEAGK-----PGRPGERGPPGPQGARGLPGTAGLP----GMKGHRGFSGLDGAKGDAG 281 Query: 893 --GPHGQP-----VGGLRFDNPRGQPVGGLRFEGGHGPSGA-----AIRFDGPHGQ--PG 938 GP G+P G PRG P G G GP+GA A GP G P Sbjct: 282 PAGPKGEPGSPGENGAPGQMGPRGLP-GERGRPGAPGPAGARGNDGATGAAGPPGPTGPA 340 Query: 939 GGIRFEGPLLQQGVGMRFEGPHG-QSVAGLRFE-GQHNQLG--GNLRFEGPHGQPGV-GI 993 G F G + +G +GP G + G+R E G G G G GQPG G Sbjct: 341 GPPGFPGAVGAKGEAGP-QGPRGSEGPQGVRGEPGPPGPAGAAGPAGNPGADGQPGAKGA 399 Query: 994 RFEGPLVQQGGGMRFEGPSVPGGGLRIEGPLGQGGPRFEGCHALRFD-GQPGQPSLLPRF 1052 + G GPS P G GP G G G + D G G+P + Sbjct: 400 NGAPGIAGAPGFPGARGPSGPQGPGGPPGPKGNSGE--PGAPGSKGDTGAKGEPGPV--- 454 Query: 1053 DGLHGQPGPRFER----TPGQPGPQRFDGPPGQQVQPRFDGVP 1091 G+ G PGP E G+PGP GPPG++ P G P Sbjct: 455 -GVQGPPGPAGEEGKRGARGEPGPTGLPGPPGERGGPGSRGFP 496 Score = 87.4 bits (215), Expect = 1e-16 Identities = 112/334 (33%), Positives = 135/334 (40%), Gaps = 55/334 (16%) Query: 782 GPPTP-ASLRFDGSPGQMGGGGP---LRFEGPQGQLGGGCPLRFEGPPGPVGTPLRF--E 835 GPP P ++ G+ G G GP F G G++G P GPPGP G + + Sbjct: 848 GPPGPIGNVGAPGAKGARGSAGPPGATGFPGAAGRVGPPGPSGNAGPPGPPGPAGKEGGK 907 Query: 836 GPIGQAGGGGFRFE----GSPGLRFE-GSPGGLRFEGPGGQP--VGGLRFEGHRGQPVGG 888 GP G+ G G E G PG E GSPG +GP G P G G RG VG Sbjct: 908 GPRGETGPAGRPGEVGPPGPPGPAGEKGSPGA---DGPAGAPGTPGPQGIAGQRGV-VGL 963 Query: 889 LRFEGPHGQPVGGLRFDNPRGQPVGGLRFEGGHGPSGAAIRFDGPHGQPG--GGIRFEGP 946 G G P GL P G+P G GPSGA+ G G PG G GP Sbjct: 964 PGQRGERGFP--GL--PGPSGEP-------GKQGPSGAS----GERGPPGPMGPPGLAGP 1008 Query: 947 LLQQGVGMRFEGPHGQSVAGLRFEGQHNQLG--GNLRFEGPHGQPGVGIRFEGPLVQQG- 1003 + G R P + G +G G G GP G PG GP+ G Sbjct: 1009 PGESG---REGAPGAEGSPGR--DGSPGAKGDRGETGPAGPPGAPGAP-GAPGPVGPAGK 1062 Query: 1004 GGMRFE----GPSVPGGGLRIEGPLGQGGPRFEGCHALRFDGQPGQPSLLPR--FDGLHG 1057 G R E GP+ P G + GP G GPR + G+ G + F GL G Sbjct: 1063 SGDRGETGPAGPAGPVGPVGARGPAGPQGPRGDKGET----GEQGDRGIKGHRGFSGLQG 1118 Query: 1058 QPGPRFERTPGQPGPQRFDGPPGQQVQPRFDGVP 1091 PGP +PG+ GP GP G + P G P Sbjct: 1119 PPGP--PGSPGEQGPSGASGPAGPRGPPGSAGAP 1150 Score = 85.5 bits (210), Expect = 4e-16 Identities = 130/420 (30%), Positives = 150/420 (35%), Gaps = 57/420 (13%) Query: 777 SPRIDGPPTPASLR-FDGSPGQMGGGGPLRFEGPQGQLGGGCPLRFEGPPGPVGTPLRFE 835 SP +G P R G G+ G GP G G G P GP GP G P Sbjct: 291 SPGENGAPGQMGPRGLPGERGRPGAPGPAGARGNDGATGAAGPPGPTGPAGPPGFP-GAV 349 Query: 836 GPIGQAGGGGFR-FEGSPGLRFE-GSPGGLRFEGPGGQPVGGLRFEGHRGQPVGGLRFEG 893 G G+AG G R EG G+R E G PG GP G P G GQP +G Sbjct: 350 GAKGEAGPQGPRGSEGPQGVRGEPGPPGPAGAAGPAGNP-------GADGQPGA----KG 398 Query: 894 PHGQP--VGGLRFDNPRGQPVGGLRFEGGHGPSGAAIRFDGPHGQPGGGIRFE-GPLLQQ 950 +G P G F RG P G G GP G + P + G + E GP+ Q Sbjct: 399 ANGAPGIAGAPGFPGARG-PSGPQGPGGPPGPKGNSGEPGAPGSKGDTGAKGEPGPVGVQ 457 Query: 951 GVGMRFEGPHGQSVAGLRFEGQHNQLGGNLRFEGPHGQPGVGIRFEGPLVQQ-GGGMRFE 1009 G GP G+ EG+ G GP G PG GP + G Sbjct: 458 GP----PGPAGE-------EGKRGARGE----PGPTGLPGPPGERGGPGSRGFPGADGVA 502 Query: 1010 GPSVPGGGLRIEGPLGQGGPRFEGCHALRFDGQPGQPSLLPRFDGLHGQPG-PRFERTPG 1068 GP P G GP G G E G+PG+ LP GL G PG P + G Sbjct: 503 GPKGPAGERGSPGPAGPKGSPGEA-------GRPGEAG-LPGAKGLTGSPGSPGPDGKTG 554 Query: 1069 QPGPQRFDGPPGQQVQP--RFDGVPQRFDGPQHQQASRFDIPLGLQGTRFDNHPSQRLES 1126 PGP DG PG P R F GP+ G G R P + Sbjct: 555 PPGPAGQDGRPGPPGPPGARGQAGVMGFPGPKGAAGEP-----GKAGERGVPGPPGAVGP 609 Query: 1127 VSFNQTGPYNDPPGNAFNAPSQGLQFQRHEQIFDSPQGPNFNGPHG----PGNQSFSNPL 1182 + PPG A A +G Q F GP GP G PG Q L Sbjct: 610 AGKDGEAGAQGPPGPAGPAGERGEQGPAGSPGFQGLPGP--AGPPGEAGKPGEQGVPGDL 667 Score = 80.5 bits (197), Expect = 1e-14 Identities = 133/444 (29%), Positives = 161/444 (36%), Gaps = 82/444 (18%) Query: 771 EGPN-KLSPRIDGPPTPASLRF-DGSPGQMGGGGPLRFEGPQGQ--LGGGCP-------- 818 EGP PR GP PA DG PGQ G GP GP G LGG Sbjct: 111 EGPKGDTGPR--GPRGPAGPPGRDGIPGQPGLPGPPGPPGPPGPPGLGGNFAPQLSYGYD 168 Query: 819 ------LRFEGPPGPVGTPLRFEGPIGQAGGGGFRFEGSPGLRFE-GSPGGLRFEGPGGQ 871 + GP GP G P GP G G G F+G PG E G+ G + GP G Sbjct: 169 EKSTGGISVPGPMGPSG-PRGLPGPPGAPGPQG--FQGPPGEPGEPGASGPMGPRGPPGP 225 Query: 872 PVGGLRFEGHRGQPVGGLRFEGPHGQPVGGLRFDNPRGQP-----VGGLRFEGGHGPSGA 926 P G +G G+P G GP G P G G P G +G G +G Sbjct: 226 P-GKNGDDGEAGKP-GRPGERGPPG-PQGARGLPGTAGLPGMKGHRGFSGLDGAKGDAGP 282 Query: 927 AIRFDGPHGQPG--GGIRFEGPLLQQGVGMRFEGPHGQSVAGLRFEGQHNQLGGNLRFEG 984 A GP G+PG G G + +G+ P AG R G G Sbjct: 283 A----GPKGEPGSPGENGAPGQMGPRGLPGERGRPGAPGPAGARGNDGATGAAGPPGPTG 338 Query: 985 PHGQPG----VGIRFE-GPLVQQGGGMRFEGPSVPGGGLRIEGPLGQGGPRFEGCHALRF 1039 P G PG VG + E GP +G EGP G GP G GP Sbjct: 339 PAGPPGFPGAVGAKGEAGPQGPRGS----EGPQGVRGEPGPPGPAGAAGPAGNP----GA 390 Query: 1040 DGQPGQPSLLPRFDGLHGQPG----PRFERTPGQPGPQRFDGPPGQQVQPRFDGVPQRFD 1095 DGQPG G +G PG P F G GPQ GPPG + G P Sbjct: 391 DGQPGA-------KGANGAPGIAGAPGFPGARGPSGPQGPGGPPGPKGNSGEPGAP---- 439 Query: 1096 GPQHQQASRFDI-PLGLQGTRFDNHPSQRLESVSFNQTGPYN--DPPGNAFNAPSQGLQF 1152 G + ++ + P+G+QG + + + + GP PPG S+G Sbjct: 440 GSKGDTGAKGEPGPVGVQGP--PGPAGEEGKRGARGEPGPTGLPGPPGERGGPGSRGF-- 495 Query: 1153 QRHEQIFDSPQGPNFNGPHGPGNQ 1176 P GP GP + Sbjct: 496 ---------PGADGVAGPKGPAGE 510 Score = 80.5 bits (197), Expect = 1e-14 Identities = 133/419 (31%), Positives = 154/419 (36%), Gaps = 79/419 (18%) Query: 782 GPPT-PASLRFDGSPGQMGGGGPLRFEGPQGQLGGGCPLRFEGPPGPVGT--PLRFEGPI 838 GPP P ++ G+ G+ G GP EGPQG G GPPGP G P G Sbjct: 341 GPPGFPGAV---GAKGEAGPQGPRGSEGPQGVRGE------PGPPGPAGAAGPAGNPGAD 391 Query: 839 GQAGGGGFRFEGSPGLR----FEGSPGGLRFEGPGGQPVGGLRFEGHRGQPVGGLRFEGP 894 GQ G G G+PG+ F G+ G +GPGG P G G G P G G Sbjct: 392 GQPGAKG--ANGAPGIAGAPGFPGARGPSGPQGPGGPP-GPKGNSGEPGAP-GSKGDTGA 447 Query: 895 HGQPVGGLRFDNPRGQPVGGLRFEGGHGPSGAAIRFDGPHGQPGG-GIR-FEGPLLQQGV 952 G+P G + P G P G G G G GP G+ GG G R F G GV Sbjct: 448 KGEP-GPVGVQGPPG-PAGEEGKRGARGEPGPT-GLPGPPGERGGPGSRGFPG---ADGV 501 Query: 953 GMRFEGPHGQSVAGLRFEGQHNQLGGNLRFEGPHGQPG-VGIRFEGPLVQQGGGMRFEGP 1011 GP G AG R G+ GP G PG G E L G G Sbjct: 502 A----GPKGP--AGER---------GSPGPAGPKGSPGEAGRPGEAGLPGAKGLTGSPGS 546 Query: 1012 SVPGGGLRIEGPLGQGG-PRFEGCHALRFDGQPGQPSLLPRFDGLHGQPGPRFERTPGQP 1070 P G GP GQ G P G R GQ G P G G+PG ER G P Sbjct: 547 PGPDGKTGPPGPAGQDGRPGPPGPPGAR--GQAGVMG-FPGPKGAAGEPGKAGER--GVP 601 Query: 1071 GPQRFDGPPGQQVQPRFDGVPQRFDGPQHQQASRFDIPLGLQGTRFDNHPSQRLESVSFN 1130 GP GP G+ + G P P G G R + P+ S F Sbjct: 602 GPPGAVGPAGKDGEAGAQGPPG---------------PAGPAGERGEQGPA---GSPGFQ 643 Query: 1131 QTGPYNDPPGNAFNAPSQGL---------QFQRHEQIFDSPQGPNFNGPHGPGNQSFSN 1180 PPG A QG+ R E+ F +G GP GP +N Sbjct: 644 GLPGPAGPPGEAGKPGEQGVPGDLGAPGPSGARGERGFPGERG--VQGPPGPAGPRGAN 700 Score = 77.8 bits (190), Expect = 8e-14 Identities = 134/412 (32%), Positives = 153/412 (37%), Gaps = 56/412 (13%) Query: 777 SPRIDGPPTPASLRFD-GSPGQMGGGGPLRFEGPQGQLGG-GCPLR--FEGPPGPVGTPL 832 SP G P PA + G PG+ G G L GP G G G P +GPPGP G P Sbjct: 639 SPGFQGLPGPAGPPGEAGKPGEQGVPGDLGAPGPSGARGERGFPGERGVQGPPGPAG-PR 697 Query: 833 RFEGPIGQAGGGGFRFEGSPGLRFEGSPGGLRFEG-PGGQPVGGLRF-EGHRGQ--PVGG 888 G G G G G+PG GS G +G PG + GL +G RG P G Sbjct: 698 GANGAPGNDGAKG--DAGAPGA--PGSQGAPGLQGMPGERGAAGLPGPKGDRGDAGPKGA 753 Query: 889 LRFEGPHGQPVGGLRFDNPRGQPVGGLRFEGGHGPSGAAIRFDGPHGQPGG-GIRFE-GP 946 G G V GL P G +G GPSG A GP G G G R E GP Sbjct: 754 DGSPGKDG--VRGLTGPIGPPGPAGAPGDKGESGPSGPA----GPTGARGAPGDRGEPGP 807 Query: 947 LLQQGVGMRFEGPHG-QSVAGLRFEGQHNQLGGNLRFEGPHGQPGVGIRFEGPLVQQG-- 1003 G F GP G G + E G+ GP G G GP+ G Sbjct: 808 PGPAG----FAGPPGADGQPGAKGEPGDAGAKGDAGPPGPAGPAGP----PGPIGNVGAP 859 Query: 1004 GGMRFEGPSVPGGGLRIEGPLGQGGPRFEGCHALRFDGQPGQPSLLPRFDGLHGQPGPRF 1063 G G + P G G G+ GP +A G PG P G G GPR Sbjct: 860 GAKGARGSAGPPGATGFPGAAGRVGPPGPSGNA----GPPGPPGPA----GKEGGKGPRG 911 Query: 1064 ERTP-GQPGPQRFDGPPGQQVQPRFDGVPQRFDGPQHQQASRFDIPLGLQGTR-FDNHPS 1121 E P G+PG GPPG + G DGP A P G+ G R P Sbjct: 912 ETGPAGRPGEVGPPGPPGPAGEKGSPGA----DGP--AGAPGTPGPQGIAGQRGVVGLPG 965 Query: 1122 QRLESVSFNQTGPYNDPPGNAFNAPSQGLQFQRHEQIFDSPQG-PNFNGPHG 1172 QR E GP +P QG E+ P G P GP G Sbjct: 966 QRGERGFPGLPGPSGEP-------GKQGPSGASGERGPPGPMGPPGLAGPPG 1010 Score = 76.6 bits (187), Expect = 2e-13 Identities = 108/330 (32%), Positives = 125/330 (37%), Gaps = 63/330 (19%) Query: 782 GPPTPASLRFDGSPGQMGGGGPLRFEGPQGQLGGGCPLRFEGPPGPVGT--------PLR 833 GPP P G G+ GG GP GP G+ G P GPPGP G P Sbjct: 893 GPPGPP-----GPAGKEGGKGPRGETGPAGRPGEVGP---PGPPGPAGEKGSPGADGPAG 944 Query: 834 FEGPIGQAGGGGFR-FEGSPGLRFE-GSPGGLRFEGPGGQP--VGGLRFEGHRGQP--VG 887 G G G G R G PG R E G PG GP G+P G G RG P +G Sbjct: 945 APGTPGPQGIAGQRGVVGLPGQRGERGFPG---LPGPSGEPGKQGPSGASGERGPPGPMG 1001 Query: 888 GLRFEGPHGQPVGGLRFDNPRGQPV--GGLRFEGGHGPSGAAIRFDGPHGQPGGGIRFEG 945 GP G+ G G P G +G G +G A GP G PG G Sbjct: 1002 PPGLAGPPGES-GREGAPGAEGSPGRDGSPGAKGDRGETGPA----GPPGAPGAP-GAPG 1055 Query: 946 PLLQQGV-GMRFE-GPHGQSVAGLRFEGQHNQLG--GNLRFEGPHGQPG-VGIRFEGPLV 1000 P+ G G R E GP G + G +G G +GP G G G + + + Sbjct: 1056 PVGPAGKSGDRGETGPAGPA-------GPVGPVGARGPAGPQGPRGDKGETGEQGDRGIK 1108 Query: 1001 QQGGGMRFEGPSVPGGGLRIEGPLGQGGPRFEGCHALRFDGQPGQPSLLPRFDGLHGQPG 1060 G +GP P G +GP G GP G PG P DGL+G PG Sbjct: 1109 GHRGFSGLQGPPGPPGSPGEQGPSGASGPAGPR-------GPPGSAGA-PGKDGLNGLPG 1160 Query: 1061 PRFERTP----------GQPGPQRFDGPPG 1080 P P G PGP GPPG Sbjct: 1161 PIGPPGPRGRTGDAGPVGPPGPPGPPGPPG 1190 Score = 75.1 bits (183), Expect = 5e-13 Identities = 109/331 (32%), Positives = 127/331 (38%), Gaps = 69/331 (20%) Query: 754 GPSRPSVARDGPTKMIFEGPNKLSPRIDGPPTPASLR-FDGSPGQMGGGGPLRFEGPQGQ 812 GP P+ + P +GP +P GP A R G PGQ G G GP G+ Sbjct: 926 GPPGPAGEKGSPGA---DGPAG-APGTPGPQGIAGQRGVVGLPGQRGERGFPGLPGPSGE 981 Query: 813 LGGGCPLRFEG---PPGPVGTPLRFEGPIGQAGGGGFRFEGSPGLRFEGSPGGLRFEGPG 869 G P G PPGP+G P GP G++G EG+PG EGSPG R PG Sbjct: 982 PGKQGPSGASGERGPPGPMGPP-GLAGPPGESGR-----EGAPGA--EGSPG--RDGSPG 1031 Query: 870 GQPVGGLRFEGHRGQPVGGLRFEGPHGQPVGGLRFDNPRGQPVGGLRFEGGHGPSGAAIR 929 + G RG+ GP G P G G PVG G G +G A Sbjct: 1032 AK--------GDRGET-------GPAGPP-GAPGAPGAPG-PVGPAGKSGDRGETGPA-- 1072 Query: 930 FDGPHGQPGGGIRFEGPLLQQGVGMRFEGPHGQSVAGLRFEGQHNQLGGNLRFEGPHGQP 989 GP G P G + GP QG P G G E + G+ F G G P Sbjct: 1073 --GPAG-PVGPVGARGPAGPQG-------PRGDK--GETGEQGDRGIKGHRGFSGLQGPP 1120 Query: 990 GVGIRFEGPLVQQGGGMRFEGPSVPGGGLRIEGPLGQGG-PRFEGCHALRFDGQPGQPSL 1048 G G +GPS G GP G G P +G + L G G P Sbjct: 1121 G-----------PPGSPGEQGPSGASGPAGPRGPPGSAGAPGKDGLNGL--PGPIGPPG- 1166 Query: 1049 LPRFDGLHGQPGPRFERTPGQPGPQRFDGPP 1079 PR G G GP PG PGP GPP Sbjct: 1167 -PR--GRTGDAGP--VGPPGPPGPPGPPGPP 1192 Score = 72.8 bits (177), Expect = 2e-12 Identities = 127/428 (29%), Positives = 159/428 (37%), Gaps = 59/428 (13%) Query: 781 DGPPTPASLRFDGSPGQMGGGGPLRFEGPQGQLGGGCPLRFEGPPGPVGTPLRFEGPIGQ 840 DG +P G G G GP+G G P +G PG G P GP G Sbjct: 97 DGSESPTDQETTGVEGPKGD------TGPRGPRGPAGPPGRDGIPGQPGLP-GPPGPPGP 149 Query: 841 AGGGGFRFEGSPGLRF---EGSPGGLRFEGPGGQPVGGLRFEGHRGQPVGGLRFEGPHGQ 897 G G +P L + E S GG+ GP G P G G G P G F+GP G+ Sbjct: 150 PGPPGLGGNFAPQLSYGYDEKSTGGISVPGPMG-PSGPRGLPGPPGAP-GPQGFQGPPGE 207 Query: 898 P--VGGLRFDNPRGQPVGGLRFEGGHGPSGAAIRFDGPHGQPG--GGIRFEGPLLQQGV- 952 P G PRG P G G G +G R G G PG G G G+ Sbjct: 208 PGEPGASGPMGPRGPP-GPPGKNGDDGEAGKPGR-PGERGPPGPQGARGLPGTAGLPGMK 265 Query: 953 GMR-FEGPHG----QSVAGLRFEGQHNQLGGNLRFEGPHGQPGVGIR--FEGPLVQQG-- 1003 G R F G G AG + E G GP G PG R GP +G Sbjct: 266 GHRGFSGLDGAKGDAGPAGPKGEPGSPGENGAPGQMGPRGLPGERGRPGAPGPAGARGND 325 Query: 1004 ---GGMRFEGPSVPG------GGLRIEGPLGQGGPR-FEGCHALRFDGQPGQPSLLPRFD 1053 G GP+ P G + +G G GPR EG +R G+PG P Sbjct: 326 GATGAAGPPGPTGPAGPPGFPGAVGAKGEAGPQGPRGSEGPQGVR--GEPGPPGPAGA-A 382 Query: 1054 GLHGQPGPRFERTPGQPGPQRFDGPPGQQVQPRFDGVPQRFDGPQHQQASRFDIPLGLQG 1113 G G PG GQPG + +G PG P F G + GPQ P G +G Sbjct: 383 GPAGNPG-----ADGQPGAKGANGAPGIAGAPGFPGA-RGPSGPQGPGG-----PPGPKG 431 Query: 1114 TRFD-NHPSQRLESVSFNQTGP--YNDPPGNAFNAPSQGLQFQRHEQIFDSPQGPNFNGP 1170 + P + ++ + + GP PPG A +G + + P G Sbjct: 432 NSGEPGAPGSKGDTGAKGEPGPVGVQGPPGPAGEEGKRGARGEPGPTGLPGPPGER---- 487 Query: 1171 HGPGNQSF 1178 GPG++ F Sbjct: 488 GGPGSRGF 495 Score = 45.1 bits (105), Expect = 5e-04 Identities = 35/102 (34%), Positives = 39/102 (38%), Gaps = 22/102 (21%) Query: 780 IDGPPTPASLRFDGSPGQMG---GGGPLRFEGPQGQLGGGCPLRFEGPPGPVGTPLRFEG 836 + GPP P GSPG+ G GP GP G G G PGP+G P G Sbjct: 1116 LQGPPGPP-----GSPGEQGPSGASGPAGPRGPPGSAGAPGKDGLNGLPGPIGPP----G 1166 Query: 837 PIGQAGGGGFRFEGSPGLRFEGSPGGLRFEGPGGQPVGGLRF 878 P G+ G G G PG GP G P G F Sbjct: 1167 PRGRTGDAG----------PVGPPGPPGPPGPPGPPSAGFDF 1198 >gi|98985810 alpha 1 type XI collagen isoform B preproprotein [Homo sapiens] Length = 1818 Score = 98.6 bits (244), Expect = 4e-20 Identities = 153/506 (30%), Positives = 191/506 (37%), Gaps = 116/506 (22%) Query: 750 PLFDGPSRPSVARDGPTKMIFEGPNKLSPRIDGPPTPASLRFDGSPGQMGGGGPLRFEGP 809 P+ R S GP + P + P+ GPP PA + G+PG+ G GP +G Sbjct: 1067 PVGSPGERGSAGTAGPIGL----PGRPGPQ--GPPGPAGEK--GAPGEKGPQGPAGRDGV 1118 Query: 810 QGQLGGGCPLRFEGPPGPVGTPLRFEGPIGQAGGGGFRFEGSPGLRFE-GSPGGLRFEGP 868 QG +G GP GP G+P +G G+ G G + GS G + E G PG +GP Sbjct: 1119 QGPVG------LPGPAGPAGSPGE-DGDKGEIGEPGQK--GSKGDKGENGPPGPPGLQGP 1169 Query: 869 GGQP--VGGLRFEGHRGQ--------PVGGLRFEGPHGQPVGGLRFDNPRGQ-------- 910 G P GG G RGQ G F GP G P+G P G+ Sbjct: 1170 VGAPGIAGGDGEPGPRGQQGMFGQKGDEGARGFPGPPG-PIGLQGLPGPPGEKGENGDVG 1228 Query: 911 ---PVGGLRFEGGHGPSGAAIRFDGPHGQPG-----GGIRFEGPLLQQGVGMRFEGPHGQ 962 P G G GP+GA DGP G PG GG+ +G + G GP G+ Sbjct: 1229 PMGPPGPPGPRGPQGPNGA----DGPQGPPGSVGSVGGVGEKGEPGEAG----NPGPPGE 1280 Query: 963 S-VAGLRFE-GQHNQLG-----------GNLRFEGPHGQPG-VGIRFE-------GPLVQ 1001 + V G + E G+ + G G +GP G PG VG + GP Q Sbjct: 1281 AGVGGPKGERGEKGEAGPPGAAGPPGAKGPPGDDGPKGNPGPVGFPGDPGPPGEPGPAGQ 1340 Query: 1002 QG-GGMRFE-------GPSVPGGGLRIEGPLGQGGP----RFEGCHALR-------FDGQ 1042 G GG + E GP P G GP G+ GP EG + +G Sbjct: 1341 DGVGGDKGEDGDPGQPGPPGPSGEAGPPGPPGKRGPPGAAGAEGRQGEKGAKGEAGAEGP 1400 Query: 1043 PGQ--------PSLLPRFDGLHGQPGPRFERTPGQPGPQRFDGPPGQQVQPRFDGV---P 1091 PG+ P+ P +GL G PGP E+ G PG DGPPG P G+ P Sbjct: 1401 PGKTGPVGPQGPAGKPGPEGLRGIPGPVGEQ--GLPGAAGQDGPPGPMGPPGLPGLKGDP 1458 Query: 1092 QRFDGPQHQQASRFDIPLGLQGTRFDNHPSQRLESVSFNQTGPYNDPPGNAFNAPSQGLQ 1151 H P G QG + D S G P G GL Sbjct: 1459 GSKGEKGHPGLIGLIGPPGEQGEKGDRGLPGTQGSPGAKGDGGIPGPAGPLGPPGPPGL- 1517 Query: 1152 FQRHEQIFDSPQGPNFN-GPHGPGNQ 1176 PQGP N G GP Q Sbjct: 1518 --------PGPQGPKGNKGSTGPAGQ 1535 Score = 97.8 bits (242), Expect = 7e-20 Identities = 145/487 (29%), Positives = 186/487 (38%), Gaps = 131/487 (26%) Query: 753 DGPSRPSV-ARDGPTKMIFEGPNKLSPRIDGPPTPASLRFDGSPGQMGGGGPLRFEGPQG 811 DG P++ A++ + I + + + GPP P L G PG +GG G +G G Sbjct: 514 DGSKGPTISAQEAQAQAILQ---QARIALRGPPGPMGLT--GRPGPVGGPGSSGAKGESG 568 Query: 812 QLGGGCPLRFEGPPGPVGTPLRFEGPIGQAGG-GGFRFEGSPGLR----FEGSPG----- 861 G P +GPPGP G P G G+ G GG G PG + F+G PG Sbjct: 569 DPGPQGPRGVQGPPGPTGKP----GKRGRPGADGGRGMPGEPGAKGDRGFDGLPGLPGDK 624 Query: 862 GLRFE-GPGGQP----VGGLRFE----GHRGQP--VGGLRFEGPHGQP-----VGGLRFD 905 G R E GP G P G+R E G RG P G GP G P G D Sbjct: 625 GHRGERGPQGPPGPPGDDGMRGEDGEIGPRGLPGEAGPRGLLGPRGTPGAPGQPGMAGVD 684 Query: 906 NPRGQPVGGLRFEGGHGPSGAAIRFDGPHGQPGGGIRFEGPLLQQGVGMRFEGPHGQ-SV 964 P G P G + +G GP G GP G PG +GP+ G +GP G+ + Sbjct: 685 GPPG-PKGNMGPQGEPGPPGQQGN-PGPQGLPGP----QGPIGPPGE----KGPQGKPGL 734 Query: 965 AGL----------RFEGQHNQLG--------GNLRFEGPHGQPGV-GIR----------- 994 AGL EGQ + G G + + GP G G G+R Sbjct: 735 AGLPGADGPPGHPGKEGQSGEKGALGPPGPQGPIGYPGPRGVKGADGVRGLKGSKGEKGE 794 Query: 995 -----FEGPLVQQG-----GGMRFEGPSVPGGGLRIEGPLGQGGPRFEGCH--ALRFDGQ 1042 F+G + +G G + G P G GP G GP + L G Sbjct: 795 DGFPGFKGDMGLKGDRGEVGQIGPRGEDGPEGPKGRAGPTGDPGPSGQAGEKGKLGVPGL 854 Query: 1043 PGQPSL--------LPRFDGLHGQ---------PGPRFERTP-------------GQPGP 1072 PG P P F G +G+ PGPR +R P G+PGP Sbjct: 855 PGYPGRQGPKGSTGFPGFPGANGEKGARGVAGKPGPRGQRGPTGPRGSRGARGPTGKPGP 914 Query: 1073 QRF---DGPPGQQVQ--PRFDGVPQRFDGPQHQQASRFDIPLGLQGTRFDNHPSQRLESV 1127 + DGPPG + P+ P F GP+ P G G HP QR E+ Sbjct: 915 KGTSGGDGPPGPPGERGPQGPQGPVGFPGPKGPPG-----PPGKDG--LPGHPGQRGETG 967 Query: 1128 SFNQTGP 1134 +TGP Sbjct: 968 FQGKTGP 974 Score = 95.1 bits (235), Expect = 5e-19 Identities = 140/452 (30%), Positives = 167/452 (36%), Gaps = 69/452 (15%) Query: 783 PPTPASLRFDGSPGQMGGGGPLRFEGPQGQLGGGCPLRFEGPPGPVGTPLRFEGPIGQAG 842 P P DG PG G GP GP GQ G P GP GP+G P +GP G+ G Sbjct: 675 PGQPGMAGVDGPPGPKGNMGPQGEPGPPGQQGNPGPQGLPGPQGPIGPPGE-KGPQGKPG 733 Query: 843 GGGF-RFEGSPG-LRFEGSPGGLRFEGPGGQPVGGLRFEGHRG----QPVGGLR----FE 892 G +G PG EG G GP G P G + + G RG V GL+ + Sbjct: 734 LAGLPGADGPPGHPGKEGQSGEKGALGPPG-PQGPIGYPGPRGVKGADGVRGLKGSKGEK 792 Query: 893 GPHGQP--VGGLRFDNPRGQPVGGLRFEGGHGPSGAAIRFDGPHGQPG--GGIRFEGPLL 948 G G P G + RG+ VG + G GP G R GP G PG G +G L Sbjct: 793 GEDGFPGFKGDMGLKGDRGE-VGQIGPRGEDGPEGPKGR-AGPTGDPGPSGQAGEKGKLG 850 Query: 949 QQGVG--MRFEGPHGQSVAGLRFEGQHNQLG--GNLRFEGPHGQPGVGIRFEGPLVQQG- 1003 G+ +GP G S F G + + G G GP GQ G GP +G Sbjct: 851 VPGLPGYPGRQGPKG-STGFPGFPGANGEKGARGVAGKPGPRGQRGP----TGPRGSRGA 905 Query: 1004 -GGMRFEGPSVPGGGLRIEGPLGQGGPRFEGCHALRFDGQPGQPSLLPRFDGLHGQPGPR 1062 G GP GG GP G+ GP+ + F G G P P DGL G PG R Sbjct: 906 RGPTGKPGPKGTSGGDGPPGPPGERGPQGPQ-GPVGFPGPKGPPG-PPGKDGLPGHPGQR 963 Query: 1063 ----FERTPGQPGPQRF---------------------DGPPGQQVQPRFDGVPQRFDGP 1097 F+ G PGP GPPG+Q P G P Sbjct: 964 GETGFQGKTGPPGPGGVVGPQGPTGETGPIGERGHPGPPGPPGEQGLPGAAGKEGAKGDP 1023 Query: 1098 QHQQASRFDIPLGLQG-------TRFDNHPSQRLESVSFNQTGPYNDP--PGNAFNAPSQ 1148 Q S D P GL+G P + GP P G+A A Sbjct: 1024 GPQGISGKDGPAGLRGFPGERGLPGAQGAPGLKGGEGPQGPPGPVGSPGERGSAGTAGPI 1083 Query: 1149 GLQFQRHEQIFDSPQG----PNFNGPHGPGNQ 1176 GL + Q P G P GP GP + Sbjct: 1084 GLPGRPGPQGPPGPAGEKGAPGEKGPQGPAGR 1115 Score = 88.6 bits (218), Expect = 4e-17 Identities = 116/380 (30%), Positives = 145/380 (38%), Gaps = 102/380 (26%) Query: 782 GPPTPASLR-FDGSPGQMGGGGPLRFEGPQGQLGGGCPLRFEGPPGPVGTPLRFEGPIGQ 840 GPP P L+ G PG+ G G + GP G G P G GP G P G +G Sbjct: 1204 GPPGPIGLQGLPGPPGEKGENGDVGPMGPPGPPGPRGPQGPNGADGPQGPP----GSVGS 1259 Query: 841 AGGGGFRFE-------GSPGLRFEGSPGGLRFEGPGGQPVGGLRFEGHRGQPVGGLRFEG 893 GG G + E G PG G P G R E P G G +G P +G Sbjct: 1260 VGGVGEKGEPGEAGNPGPPGEAGVGGPKGERGEKGEAGPPGAAGPPGAKGPPGD----DG 1315 Query: 894 PHGQP--VGGLRFDNPRGQP-------VGGLRFEGGH-------GPSGAAIRFDGPHGQP 937 P G P VG P G+P VGG + E G GPSG A GP G P Sbjct: 1316 PKGNPGPVGFPGDPGPPGEPGPAGQDGVGGDKGEDGDPGQPGPPGPSGEA----GPPGPP 1371 Query: 938 G-----GGIRFEGPLLQQGVGMRF--EGPHGQSVAGLRFEGQHNQLGGNLRFEGPHGQPG 990 G G EG ++G EGP G++ G + +GP G+PG Sbjct: 1372 GKRGPPGAAGAEGRQGEKGAKGEAGAEGPPGKT--------------GPVGPQGPAGKPG 1417 Query: 991 V-GIR-FEGPLVQQG--GGMRFEGPSVPGG-----GLR----------------IEGPLG 1025 G+R GP+ +QG G +GP P G GL+ + GP G Sbjct: 1418 PEGLRGIPGPVGEQGLPGAAGQDGPPGPMGPPGLPGLKGDPGSKGEKGHPGLIGLIGPPG 1477 Query: 1026 QGG-------PRFEGCHALRFDGQ---PGQPSLLPRFDGLHGQPGPRFER---------- 1065 + G P +G + DG P P P GL G GP+ + Sbjct: 1478 EQGEKGDRGLPGTQGSPGAKGDGGIPGPAGPLGPPGPPGLPGPQGPKGNKGSTGPAGQKG 1537 Query: 1066 TPGQPGPQRFDGPPGQQVQP 1085 G PGP GPPG+ +QP Sbjct: 1538 DSGLPGPPGSPGPPGEVIQP 1557 Score = 73.9 bits (180), Expect = 1e-12 Identities = 106/333 (31%), Positives = 127/333 (38%), Gaps = 81/333 (24%) Query: 780 IDGPPTPASLRFDGSPGQMGGGGPLRFEGPQGQLGGGCPLRFEGPPGPVGTPLRFEGPIG 839 ++GPP PA GP GP G +GP GP G P GP G Sbjct: 452 VEGPPGPA--------------GPAGIMGPPG---------LQGPTGPPGDP-GDRGPPG 487 Query: 840 QAGGGGFRFEGSPGLRFEGSPGGL-----RFEGPG--GQPVGGLRFEGHRGQPVGGLRFE 892 + G G+ GL G PG + R+ G G G + + + Sbjct: 488 RPG-----LPGADGL--PGPPGTMLMLPFRYGGDGSKGPTISAQEAQAQAILQQARIALR 540 Query: 893 GPHGQPVGGLRFDNPRGQPVGGLRFEGGHGPSGAAIRFDGPHGQPGGGIRFEGPLLQQGV 952 GP G P+G R PVGG G G SG GP G P G GP + G Sbjct: 541 GPPG-PMG----LTGRPGPVGGPGSSGAKGESGD----PGPQG-PRGVQGPPGPTGKPGK 590 Query: 953 GMRFEGPHGQSVAGLRFEGQHNQLGGNLRFEGPHGQPG-VGIRFE-GPLVQQG----GGM 1006 R G+ + G G+ F+G G PG G R E GP G GM Sbjct: 591 RGRPGADGGRGMPG------EPGAKGDRGFDGLPGLPGDKGHRGERGPQGPPGPPGDDGM 644 Query: 1007 RFEGPSVPGGGLRIE-GPLGQGGPRFEGCHALRFDGQPGQPSLLPRFDGLHGQPGPRFER 1065 R E + GL E GP G GPR G PGQP + G+ G PGP+ Sbjct: 645 RGEDGEIGPRGLPGEAGPRGLLGPR-------GTPGAPGQPGMA----GVDGPPGPK--- 690 Query: 1066 TPGQPGPQRFDGPPGQQVQPRFDGVPQRFDGPQ 1098 G GPQ GPPGQQ P G+P GPQ Sbjct: 691 --GNMGPQGEPGPPGQQGNPGPQGLP----GPQ 717 Score = 64.3 bits (155), Expect = 9e-10 Identities = 115/394 (29%), Positives = 140/394 (35%), Gaps = 57/394 (14%) Query: 809 PQGQLGGGCPLRFEGPPGPVGTPLRFEGPIGQAGGGGFRFEGSPGLRFEGSPGGLRFEGP 868 P + G G P + T + G G+ G G PG+ EG PG GP Sbjct: 409 PNEEFGPGVPAETD----ITETSINGHGAYGEKGQKGEPAVVEPGMLVEGPPGP---AGP 461 Query: 869 GGQPVGGLRFEGHRGQPVGGLRFEGPHGQPVGGLRFDNPRGQPVGGLRFE---GGHGPSG 925 G +G +G G P G GP G+P G D G P L GG G G Sbjct: 462 AG-IMGPPGLQGPTGPP-GDPGDRGPPGRP-GLPGADGLPGPPGTMLMLPFRYGGDGSKG 518 Query: 926 AAIRFDGPHGQ---PGGGIRFEGPLLQQGVGMRFEGPHGQSVAGLRFEGQHNQLGGNLRF 982 I Q I GP G+ R G +G + E G Sbjct: 519 PTISAQEAQAQAILQQARIALRGPPGPMGLTGRPGPVGGPGSSGAKGESGDPGPQGPRGV 578 Query: 983 EGPHGQPGVGIRFEGPLVQQGGGM----------RFEG-PSVPG--GGLRIEGPLGQGGP 1029 +GP G G + P G GM F+G P +PG G GP G GP Sbjct: 579 QGPPGPTGKPGKRGRPGADGGRGMPGEPGAKGDRGFDGLPGLPGDKGHRGERGPQGPPGP 638 Query: 1030 RFEGCHALR-FDGQPGQPSLLPRFDGLHGQPGPR-FERTPGQPGPQRFDGPPGQQVQPRF 1087 G +R DG+ G P LP G G GPR PGQPG DGPPG P+ Sbjct: 639 --PGDDGMRGEDGEIG-PRGLPGEAGPRGLLGPRGTPGAPGQPGMAGVDGPPG----PKG 691 Query: 1088 DGVPQRFDGPQHQQASRFDIPLGLQGTRFDNHPSQRLESVSFNQTGPYNDP-----PGNA 1142 + PQ GP QQ + P GL G + P + GP P PG Sbjct: 692 NMGPQGEPGPPGQQGN--PGPQGLPGPQGPIGPP--------GEKGPQGKPGLAGLPGAD 741 Query: 1143 FNAPSQGLQFQRHEQIFDSPQGP----NFNGPHG 1172 G + Q E+ P GP + GP G Sbjct: 742 GPPGHPGKEGQSGEKGALGPPGPQGPIGYPGPRG 775 >gi|98985808 alpha 1 type XI collagen isoform C preproprotein [Homo sapiens] Length = 1767 Score = 98.6 bits (244), Expect = 4e-20 Identities = 153/506 (30%), Positives = 191/506 (37%), Gaps = 116/506 (22%) Query: 750 PLFDGPSRPSVARDGPTKMIFEGPNKLSPRIDGPPTPASLRFDGSPGQMGGGGPLRFEGP 809 P+ R S GP + P + P+ GPP PA + G+PG+ G GP +G Sbjct: 1016 PVGSPGERGSAGTAGPIGL----PGRPGPQ--GPPGPAGEK--GAPGEKGPQGPAGRDGV 1067 Query: 810 QGQLGGGCPLRFEGPPGPVGTPLRFEGPIGQAGGGGFRFEGSPGLRFE-GSPGGLRFEGP 868 QG +G GP GP G+P +G G+ G G + GS G + E G PG +GP Sbjct: 1068 QGPVG------LPGPAGPAGSPGE-DGDKGEIGEPGQK--GSKGDKGENGPPGPPGLQGP 1118 Query: 869 GGQP--VGGLRFEGHRGQ--------PVGGLRFEGPHGQPVGGLRFDNPRGQ-------- 910 G P GG G RGQ G F GP G P+G P G+ Sbjct: 1119 VGAPGIAGGDGEPGPRGQQGMFGQKGDEGARGFPGPPG-PIGLQGLPGPPGEKGENGDVG 1177 Query: 911 ---PVGGLRFEGGHGPSGAAIRFDGPHGQPG-----GGIRFEGPLLQQGVGMRFEGPHGQ 962 P G G GP+GA DGP G PG GG+ +G + G GP G+ Sbjct: 1178 PMGPPGPPGPRGPQGPNGA----DGPQGPPGSVGSVGGVGEKGEPGEAG----NPGPPGE 1229 Query: 963 S-VAGLRFE-GQHNQLG-----------GNLRFEGPHGQPG-VGIRFE-------GPLVQ 1001 + V G + E G+ + G G +GP G PG VG + GP Q Sbjct: 1230 AGVGGPKGERGEKGEAGPPGAAGPPGAKGPPGDDGPKGNPGPVGFPGDPGPPGEPGPAGQ 1289 Query: 1002 QG-GGMRFE-------GPSVPGGGLRIEGPLGQGGP----RFEGCHALR-------FDGQ 1042 G GG + E GP P G GP G+ GP EG + +G Sbjct: 1290 DGVGGDKGEDGDPGQPGPPGPSGEAGPPGPPGKRGPPGAAGAEGRQGEKGAKGEAGAEGP 1349 Query: 1043 PGQ--------PSLLPRFDGLHGQPGPRFERTPGQPGPQRFDGPPGQQVQPRFDGV---P 1091 PG+ P+ P +GL G PGP E+ G PG DGPPG P G+ P Sbjct: 1350 PGKTGPVGPQGPAGKPGPEGLRGIPGPVGEQ--GLPGAAGQDGPPGPMGPPGLPGLKGDP 1407 Query: 1092 QRFDGPQHQQASRFDIPLGLQGTRFDNHPSQRLESVSFNQTGPYNDPPGNAFNAPSQGLQ 1151 H P G QG + D S G P G GL Sbjct: 1408 GSKGEKGHPGLIGLIGPPGEQGEKGDRGLPGTQGSPGAKGDGGIPGPAGPLGPPGPPGL- 1466 Query: 1152 FQRHEQIFDSPQGPNFN-GPHGPGNQ 1176 PQGP N G GP Q Sbjct: 1467 --------PGPQGPKGNKGSTGPAGQ 1484 Score = 97.8 bits (242), Expect = 7e-20 Identities = 145/487 (29%), Positives = 186/487 (38%), Gaps = 131/487 (26%) Query: 753 DGPSRPSV-ARDGPTKMIFEGPNKLSPRIDGPPTPASLRFDGSPGQMGGGGPLRFEGPQG 811 DG P++ A++ + I + + + GPP P L G PG +GG G +G G Sbjct: 463 DGSKGPTISAQEAQAQAILQ---QARIALRGPPGPMGLT--GRPGPVGGPGSSGAKGESG 517 Query: 812 QLGGGCPLRFEGPPGPVGTPLRFEGPIGQAGG-GGFRFEGSPGLR----FEGSPG----- 861 G P +GPPGP G P G G+ G GG G PG + F+G PG Sbjct: 518 DPGPQGPRGVQGPPGPTGKP----GKRGRPGADGGRGMPGEPGAKGDRGFDGLPGLPGDK 573 Query: 862 GLRFE-GPGGQP----VGGLRFE----GHRGQP--VGGLRFEGPHGQP-----VGGLRFD 905 G R E GP G P G+R E G RG P G GP G P G D Sbjct: 574 GHRGERGPQGPPGPPGDDGMRGEDGEIGPRGLPGEAGPRGLLGPRGTPGAPGQPGMAGVD 633 Query: 906 NPRGQPVGGLRFEGGHGPSGAAIRFDGPHGQPGGGIRFEGPLLQQGVGMRFEGPHGQ-SV 964 P G P G + +G GP G GP G PG +GP+ G +GP G+ + Sbjct: 634 GPPG-PKGNMGPQGEPGPPGQQGN-PGPQGLPGP----QGPIGPPGE----KGPQGKPGL 683 Query: 965 AGL----------RFEGQHNQLG--------GNLRFEGPHGQPGV-GIR----------- 994 AGL EGQ + G G + + GP G G G+R Sbjct: 684 AGLPGADGPPGHPGKEGQSGEKGALGPPGPQGPIGYPGPRGVKGADGVRGLKGSKGEKGE 743 Query: 995 -----FEGPLVQQG-----GGMRFEGPSVPGGGLRIEGPLGQGGPRFEGCH--ALRFDGQ 1042 F+G + +G G + G P G GP G GP + L G Sbjct: 744 DGFPGFKGDMGLKGDRGEVGQIGPRGEDGPEGPKGRAGPTGDPGPSGQAGEKGKLGVPGL 803 Query: 1043 PGQPSL--------LPRFDGLHGQ---------PGPRFERTP-------------GQPGP 1072 PG P P F G +G+ PGPR +R P G+PGP Sbjct: 804 PGYPGRQGPKGSTGFPGFPGANGEKGARGVAGKPGPRGQRGPTGPRGSRGARGPTGKPGP 863 Query: 1073 QRF---DGPPGQQVQ--PRFDGVPQRFDGPQHQQASRFDIPLGLQGTRFDNHPSQRLESV 1127 + DGPPG + P+ P F GP+ P G G HP QR E+ Sbjct: 864 KGTSGGDGPPGPPGERGPQGPQGPVGFPGPKGPPG-----PPGKDG--LPGHPGQRGETG 916 Query: 1128 SFNQTGP 1134 +TGP Sbjct: 917 FQGKTGP 923 Score = 95.1 bits (235), Expect = 5e-19 Identities = 140/452 (30%), Positives = 167/452 (36%), Gaps = 69/452 (15%) Query: 783 PPTPASLRFDGSPGQMGGGGPLRFEGPQGQLGGGCPLRFEGPPGPVGTPLRFEGPIGQAG 842 P P DG PG G GP GP GQ G P GP GP+G P +GP G+ G Sbjct: 624 PGQPGMAGVDGPPGPKGNMGPQGEPGPPGQQGNPGPQGLPGPQGPIGPPGE-KGPQGKPG 682 Query: 843 GGGF-RFEGSPG-LRFEGSPGGLRFEGPGGQPVGGLRFEGHRG----QPVGGLR----FE 892 G +G PG EG G GP G P G + + G RG V GL+ + Sbjct: 683 LAGLPGADGPPGHPGKEGQSGEKGALGPPG-PQGPIGYPGPRGVKGADGVRGLKGSKGEK 741 Query: 893 GPHGQP--VGGLRFDNPRGQPVGGLRFEGGHGPSGAAIRFDGPHGQPG--GGIRFEGPLL 948 G G P G + RG+ VG + G GP G R GP G PG G +G L Sbjct: 742 GEDGFPGFKGDMGLKGDRGE-VGQIGPRGEDGPEGPKGR-AGPTGDPGPSGQAGEKGKLG 799 Query: 949 QQGVG--MRFEGPHGQSVAGLRFEGQHNQLG--GNLRFEGPHGQPGVGIRFEGPLVQQG- 1003 G+ +GP G S F G + + G G GP GQ G GP +G Sbjct: 800 VPGLPGYPGRQGPKG-STGFPGFPGANGEKGARGVAGKPGPRGQRGP----TGPRGSRGA 854 Query: 1004 -GGMRFEGPSVPGGGLRIEGPLGQGGPRFEGCHALRFDGQPGQPSLLPRFDGLHGQPGPR 1062 G GP GG GP G+ GP+ + F G G P P DGL G PG R Sbjct: 855 RGPTGKPGPKGTSGGDGPPGPPGERGPQGPQ-GPVGFPGPKGPPG-PPGKDGLPGHPGQR 912 Query: 1063 ----FERTPGQPGPQRF---------------------DGPPGQQVQPRFDGVPQRFDGP 1097 F+ G PGP GPPG+Q P G P Sbjct: 913 GETGFQGKTGPPGPGGVVGPQGPTGETGPIGERGHPGPPGPPGEQGLPGAAGKEGAKGDP 972 Query: 1098 QHQQASRFDIPLGLQG-------TRFDNHPSQRLESVSFNQTGPYNDP--PGNAFNAPSQ 1148 Q S D P GL+G P + GP P G+A A Sbjct: 973 GPQGISGKDGPAGLRGFPGERGLPGAQGAPGLKGGEGPQGPPGPVGSPGERGSAGTAGPI 1032 Query: 1149 GLQFQRHEQIFDSPQG----PNFNGPHGPGNQ 1176 GL + Q P G P GP GP + Sbjct: 1033 GLPGRPGPQGPPGPAGEKGAPGEKGPQGPAGR 1064 Score = 88.6 bits (218), Expect = 4e-17 Identities = 116/380 (30%), Positives = 145/380 (38%), Gaps = 102/380 (26%) Query: 782 GPPTPASLR-FDGSPGQMGGGGPLRFEGPQGQLGGGCPLRFEGPPGPVGTPLRFEGPIGQ 840 GPP P L+ G PG+ G G + GP G G P G GP G P G +G Sbjct: 1153 GPPGPIGLQGLPGPPGEKGENGDVGPMGPPGPPGPRGPQGPNGADGPQGPP----GSVGS 1208 Query: 841 AGGGGFRFE-------GSPGLRFEGSPGGLRFEGPGGQPVGGLRFEGHRGQPVGGLRFEG 893 GG G + E G PG G P G R E P G G +G P +G Sbjct: 1209 VGGVGEKGEPGEAGNPGPPGEAGVGGPKGERGEKGEAGPPGAAGPPGAKGPPGD----DG 1264 Query: 894 PHGQP--VGGLRFDNPRGQP-------VGGLRFEGGH-------GPSGAAIRFDGPHGQP 937 P G P VG P G+P VGG + E G GPSG A GP G P Sbjct: 1265 PKGNPGPVGFPGDPGPPGEPGPAGQDGVGGDKGEDGDPGQPGPPGPSGEA----GPPGPP 1320 Query: 938 G-----GGIRFEGPLLQQGVGMRF--EGPHGQSVAGLRFEGQHNQLGGNLRFEGPHGQPG 990 G G EG ++G EGP G++ G + +GP G+PG Sbjct: 1321 GKRGPPGAAGAEGRQGEKGAKGEAGAEGPPGKT--------------GPVGPQGPAGKPG 1366 Query: 991 V-GIR-FEGPLVQQG--GGMRFEGPSVPGG-----GLR----------------IEGPLG 1025 G+R GP+ +QG G +GP P G GL+ + GP G Sbjct: 1367 PEGLRGIPGPVGEQGLPGAAGQDGPPGPMGPPGLPGLKGDPGSKGEKGHPGLIGLIGPPG 1426 Query: 1026 QGG-------PRFEGCHALRFDGQ---PGQPSLLPRFDGLHGQPGPRFER---------- 1065 + G P +G + DG P P P GL G GP+ + Sbjct: 1427 EQGEKGDRGLPGTQGSPGAKGDGGIPGPAGPLGPPGPPGLPGPQGPKGNKGSTGPAGQKG 1486 Query: 1066 TPGQPGPQRFDGPPGQQVQP 1085 G PGP GPPG+ +QP Sbjct: 1487 DSGLPGPPGSPGPPGEVIQP 1506 Score = 73.9 bits (180), Expect = 1e-12 Identities = 106/333 (31%), Positives = 127/333 (38%), Gaps = 81/333 (24%) Query: 780 IDGPPTPASLRFDGSPGQMGGGGPLRFEGPQGQLGGGCPLRFEGPPGPVGTPLRFEGPIG 839 ++GPP PA GP GP G +GP GP G P GP G Sbjct: 401 VEGPPGPA--------------GPAGIMGPPG---------LQGPTGPPGDP-GDRGPPG 436 Query: 840 QAGGGGFRFEGSPGLRFEGSPGGL-----RFEGPG--GQPVGGLRFEGHRGQPVGGLRFE 892 + G G+ GL G PG + R+ G G G + + + Sbjct: 437 RPG-----LPGADGL--PGPPGTMLMLPFRYGGDGSKGPTISAQEAQAQAILQQARIALR 489 Query: 893 GPHGQPVGGLRFDNPRGQPVGGLRFEGGHGPSGAAIRFDGPHGQPGGGIRFEGPLLQQGV 952 GP G P+G R PVGG G G SG GP G P G GP + G Sbjct: 490 GPPG-PMG----LTGRPGPVGGPGSSGAKGESGD----PGPQG-PRGVQGPPGPTGKPGK 539 Query: 953 GMRFEGPHGQSVAGLRFEGQHNQLGGNLRFEGPHGQPG-VGIRFE-GPLVQQG----GGM 1006 R G+ + G G+ F+G G PG G R E GP G GM Sbjct: 540 RGRPGADGGRGMPG------EPGAKGDRGFDGLPGLPGDKGHRGERGPQGPPGPPGDDGM 593 Query: 1007 RFEGPSVPGGGLRIE-GPLGQGGPRFEGCHALRFDGQPGQPSLLPRFDGLHGQPGPRFER 1065 R E + GL E GP G GPR G PGQP + G+ G PGP+ Sbjct: 594 RGEDGEIGPRGLPGEAGPRGLLGPR-------GTPGAPGQPGMA----GVDGPPGPK--- 639 Query: 1066 TPGQPGPQRFDGPPGQQVQPRFDGVPQRFDGPQ 1098 G GPQ GPPGQQ P G+P GPQ Sbjct: 640 --GNMGPQGEPGPPGQQGNPGPQGLP----GPQ 666 Score = 64.3 bits (155), Expect = 9e-10 Identities = 115/394 (29%), Positives = 140/394 (35%), Gaps = 57/394 (14%) Query: 809 PQGQLGGGCPLRFEGPPGPVGTPLRFEGPIGQAGGGGFRFEGSPGLRFEGSPGGLRFEGP 868 P + G G P + T + G G+ G G PG+ EG PG GP Sbjct: 358 PNEEFGPGVPAETD----ITETSINGHGAYGEKGQKGEPAVVEPGMLVEGPPGP---AGP 410 Query: 869 GGQPVGGLRFEGHRGQPVGGLRFEGPHGQPVGGLRFDNPRGQPVGGLRFE---GGHGPSG 925 G +G +G G P G GP G+P G D G P L GG G G Sbjct: 411 AG-IMGPPGLQGPTGPP-GDPGDRGPPGRP-GLPGADGLPGPPGTMLMLPFRYGGDGSKG 467 Query: 926 AAIRFDGPHGQ---PGGGIRFEGPLLQQGVGMRFEGPHGQSVAGLRFEGQHNQLGGNLRF 982 I Q I GP G+ R G +G + E G Sbjct: 468 PTISAQEAQAQAILQQARIALRGPPGPMGLTGRPGPVGGPGSSGAKGESGDPGPQGPRGV 527 Query: 983 EGPHGQPGVGIRFEGPLVQQGGGM----------RFEG-PSVPG--GGLRIEGPLGQGGP 1029 +GP G G + P G GM F+G P +PG G GP G GP Sbjct: 528 QGPPGPTGKPGKRGRPGADGGRGMPGEPGAKGDRGFDGLPGLPGDKGHRGERGPQGPPGP 587 Query: 1030 RFEGCHALR-FDGQPGQPSLLPRFDGLHGQPGPR-FERTPGQPGPQRFDGPPGQQVQPRF 1087 G +R DG+ G P LP G G GPR PGQPG DGPPG P+ Sbjct: 588 --PGDDGMRGEDGEIG-PRGLPGEAGPRGLLGPRGTPGAPGQPGMAGVDGPPG----PKG 640 Query: 1088 DGVPQRFDGPQHQQASRFDIPLGLQGTRFDNHPSQRLESVSFNQTGPYNDP-----PGNA 1142 + PQ GP QQ + P GL G + P + GP P PG Sbjct: 641 NMGPQGEPGPPGQQGN--PGPQGLPGPQGPIGPP--------GEKGPQGKPGLAGLPGAD 690 Query: 1143 FNAPSQGLQFQRHEQIFDSPQGP----NFNGPHG 1172 G + Q E+ P GP + GP G Sbjct: 691 GPPGHPGKEGQSGEKGALGPPGPQGPIGYPGPRG 724 >gi|98985806 alpha 1 type XI collagen isoform A preproprotein [Homo sapiens] Length = 1806 Score = 98.6 bits (244), Expect = 4e-20 Identities = 153/506 (30%), Positives = 191/506 (37%), Gaps = 116/506 (22%) Query: 750 PLFDGPSRPSVARDGPTKMIFEGPNKLSPRIDGPPTPASLRFDGSPGQMGGGGPLRFEGP 809 P+ R S GP + P + P+ GPP PA + G+PG+ G GP +G Sbjct: 1055 PVGSPGERGSAGTAGPIGL----PGRPGPQ--GPPGPAGEK--GAPGEKGPQGPAGRDGV 1106 Query: 810 QGQLGGGCPLRFEGPPGPVGTPLRFEGPIGQAGGGGFRFEGSPGLRFE-GSPGGLRFEGP 868 QG +G GP GP G+P +G G+ G G + GS G + E G PG +GP Sbjct: 1107 QGPVG------LPGPAGPAGSPGE-DGDKGEIGEPGQK--GSKGDKGENGPPGPPGLQGP 1157 Query: 869 GGQP--VGGLRFEGHRGQ--------PVGGLRFEGPHGQPVGGLRFDNPRGQ-------- 910 G P GG G RGQ G F GP G P+G P G+ Sbjct: 1158 VGAPGIAGGDGEPGPRGQQGMFGQKGDEGARGFPGPPG-PIGLQGLPGPPGEKGENGDVG 1216 Query: 911 ---PVGGLRFEGGHGPSGAAIRFDGPHGQPG-----GGIRFEGPLLQQGVGMRFEGPHGQ 962 P G G GP+GA DGP G PG GG+ +G + G GP G+ Sbjct: 1217 PMGPPGPPGPRGPQGPNGA----DGPQGPPGSVGSVGGVGEKGEPGEAG----NPGPPGE 1268 Query: 963 S-VAGLRFE-GQHNQLG-----------GNLRFEGPHGQPG-VGIRFE-------GPLVQ 1001 + V G + E G+ + G G +GP G PG VG + GP Q Sbjct: 1269 AGVGGPKGERGEKGEAGPPGAAGPPGAKGPPGDDGPKGNPGPVGFPGDPGPPGEPGPAGQ 1328 Query: 1002 QG-GGMRFE-------GPSVPGGGLRIEGPLGQGGP----RFEGCHALR-------FDGQ 1042 G GG + E GP P G GP G+ GP EG + +G Sbjct: 1329 DGVGGDKGEDGDPGQPGPPGPSGEAGPPGPPGKRGPPGAAGAEGRQGEKGAKGEAGAEGP 1388 Query: 1043 PGQ--------PSLLPRFDGLHGQPGPRFERTPGQPGPQRFDGPPGQQVQPRFDGV---P 1091 PG+ P+ P +GL G PGP E+ G PG DGPPG P G+ P Sbjct: 1389 PGKTGPVGPQGPAGKPGPEGLRGIPGPVGEQ--GLPGAAGQDGPPGPMGPPGLPGLKGDP 1446 Query: 1092 QRFDGPQHQQASRFDIPLGLQGTRFDNHPSQRLESVSFNQTGPYNDPPGNAFNAPSQGLQ 1151 H P G QG + D S G P G GL Sbjct: 1447 GSKGEKGHPGLIGLIGPPGEQGEKGDRGLPGTQGSPGAKGDGGIPGPAGPLGPPGPPGL- 1505 Query: 1152 FQRHEQIFDSPQGPNFN-GPHGPGNQ 1176 PQGP N G GP Q Sbjct: 1506 --------PGPQGPKGNKGSTGPAGQ 1523 Score = 97.8 bits (242), Expect = 7e-20 Identities = 145/487 (29%), Positives = 186/487 (38%), Gaps = 131/487 (26%) Query: 753 DGPSRPSV-ARDGPTKMIFEGPNKLSPRIDGPPTPASLRFDGSPGQMGGGGPLRFEGPQG 811 DG P++ A++ + I + + + GPP P L G PG +GG G +G G Sbjct: 502 DGSKGPTISAQEAQAQAILQ---QARIALRGPPGPMGLT--GRPGPVGGPGSSGAKGESG 556 Query: 812 QLGGGCPLRFEGPPGPVGTPLRFEGPIGQAGG-GGFRFEGSPGLR----FEGSPG----- 861 G P +GPPGP G P G G+ G GG G PG + F+G PG Sbjct: 557 DPGPQGPRGVQGPPGPTGKP----GKRGRPGADGGRGMPGEPGAKGDRGFDGLPGLPGDK 612 Query: 862 GLRFE-GPGGQP----VGGLRFE----GHRGQP--VGGLRFEGPHGQP-----VGGLRFD 905 G R E GP G P G+R E G RG P G GP G P G D Sbjct: 613 GHRGERGPQGPPGPPGDDGMRGEDGEIGPRGLPGEAGPRGLLGPRGTPGAPGQPGMAGVD 672 Query: 906 NPRGQPVGGLRFEGGHGPSGAAIRFDGPHGQPGGGIRFEGPLLQQGVGMRFEGPHGQ-SV 964 P G P G + +G GP G GP G PG +GP+ G +GP G+ + Sbjct: 673 GPPG-PKGNMGPQGEPGPPGQQGN-PGPQGLPGP----QGPIGPPGE----KGPQGKPGL 722 Query: 965 AGL----------RFEGQHNQLG--------GNLRFEGPHGQPGV-GIR----------- 994 AGL EGQ + G G + + GP G G G+R Sbjct: 723 AGLPGADGPPGHPGKEGQSGEKGALGPPGPQGPIGYPGPRGVKGADGVRGLKGSKGEKGE 782 Query: 995 -----FEGPLVQQG-----GGMRFEGPSVPGGGLRIEGPLGQGGPRFEGCH--ALRFDGQ 1042 F+G + +G G + G P G GP G GP + L G Sbjct: 783 DGFPGFKGDMGLKGDRGEVGQIGPRGEDGPEGPKGRAGPTGDPGPSGQAGEKGKLGVPGL 842 Query: 1043 PGQPSL--------LPRFDGLHGQ---------PGPRFERTP-------------GQPGP 1072 PG P P F G +G+ PGPR +R P G+PGP Sbjct: 843 PGYPGRQGPKGSTGFPGFPGANGEKGARGVAGKPGPRGQRGPTGPRGSRGARGPTGKPGP 902 Query: 1073 QRF---DGPPGQQVQ--PRFDGVPQRFDGPQHQQASRFDIPLGLQGTRFDNHPSQRLESV 1127 + DGPPG + P+ P F GP+ P G G HP QR E+ Sbjct: 903 KGTSGGDGPPGPPGERGPQGPQGPVGFPGPKGPPG-----PPGKDG--LPGHPGQRGETG 955 Query: 1128 SFNQTGP 1134 +TGP Sbjct: 956 FQGKTGP 962 Score = 95.1 bits (235), Expect = 5e-19 Identities = 140/452 (30%), Positives = 167/452 (36%), Gaps = 69/452 (15%) Query: 783 PPTPASLRFDGSPGQMGGGGPLRFEGPQGQLGGGCPLRFEGPPGPVGTPLRFEGPIGQAG 842 P P DG PG G GP GP GQ G P GP GP+G P +GP G+ G Sbjct: 663 PGQPGMAGVDGPPGPKGNMGPQGEPGPPGQQGNPGPQGLPGPQGPIGPPGE-KGPQGKPG 721 Query: 843 GGGF-RFEGSPG-LRFEGSPGGLRFEGPGGQPVGGLRFEGHRG----QPVGGLR----FE 892 G +G PG EG G GP G P G + + G RG V GL+ + Sbjct: 722 LAGLPGADGPPGHPGKEGQSGEKGALGPPG-PQGPIGYPGPRGVKGADGVRGLKGSKGEK 780 Query: 893 GPHGQP--VGGLRFDNPRGQPVGGLRFEGGHGPSGAAIRFDGPHGQPG--GGIRFEGPLL 948 G G P G + RG+ VG + G GP G R GP G PG G +G L Sbjct: 781 GEDGFPGFKGDMGLKGDRGE-VGQIGPRGEDGPEGPKGR-AGPTGDPGPSGQAGEKGKLG 838 Query: 949 QQGVG--MRFEGPHGQSVAGLRFEGQHNQLG--GNLRFEGPHGQPGVGIRFEGPLVQQG- 1003 G+ +GP G S F G + + G G GP GQ G GP +G Sbjct: 839 VPGLPGYPGRQGPKG-STGFPGFPGANGEKGARGVAGKPGPRGQRGP----TGPRGSRGA 893 Query: 1004 -GGMRFEGPSVPGGGLRIEGPLGQGGPRFEGCHALRFDGQPGQPSLLPRFDGLHGQPGPR 1062 G GP GG GP G+ GP+ + F G G P P DGL G PG R Sbjct: 894 RGPTGKPGPKGTSGGDGPPGPPGERGPQGPQ-GPVGFPGPKGPPG-PPGKDGLPGHPGQR 951 Query: 1063 ----FERTPGQPGPQRF---------------------DGPPGQQVQPRFDGVPQRFDGP 1097 F+ G PGP GPPG+Q P G P Sbjct: 952 GETGFQGKTGPPGPGGVVGPQGPTGETGPIGERGHPGPPGPPGEQGLPGAAGKEGAKGDP 1011 Query: 1098 QHQQASRFDIPLGLQG-------TRFDNHPSQRLESVSFNQTGPYNDP--PGNAFNAPSQ 1148 Q S D P GL+G P + GP P G+A A Sbjct: 1012 GPQGISGKDGPAGLRGFPGERGLPGAQGAPGLKGGEGPQGPPGPVGSPGERGSAGTAGPI 1071 Query: 1149 GLQFQRHEQIFDSPQG----PNFNGPHGPGNQ 1176 GL + Q P G P GP GP + Sbjct: 1072 GLPGRPGPQGPPGPAGEKGAPGEKGPQGPAGR 1103 Score = 88.6 bits (218), Expect = 4e-17 Identities = 116/380 (30%), Positives = 145/380 (38%), Gaps = 102/380 (26%) Query: 782 GPPTPASLR-FDGSPGQMGGGGPLRFEGPQGQLGGGCPLRFEGPPGPVGTPLRFEGPIGQ 840 GPP P L+ G PG+ G G + GP G G P G GP G P G +G Sbjct: 1192 GPPGPIGLQGLPGPPGEKGENGDVGPMGPPGPPGPRGPQGPNGADGPQGPP----GSVGS 1247 Query: 841 AGGGGFRFE-------GSPGLRFEGSPGGLRFEGPGGQPVGGLRFEGHRGQPVGGLRFEG 893 GG G + E G PG G P G R E P G G +G P +G Sbjct: 1248 VGGVGEKGEPGEAGNPGPPGEAGVGGPKGERGEKGEAGPPGAAGPPGAKGPPGD----DG 1303 Query: 894 PHGQP--VGGLRFDNPRGQP-------VGGLRFEGGH-------GPSGAAIRFDGPHGQP 937 P G P VG P G+P VGG + E G GPSG A GP G P Sbjct: 1304 PKGNPGPVGFPGDPGPPGEPGPAGQDGVGGDKGEDGDPGQPGPPGPSGEA----GPPGPP 1359 Query: 938 G-----GGIRFEGPLLQQGVGMRF--EGPHGQSVAGLRFEGQHNQLGGNLRFEGPHGQPG 990 G G EG ++G EGP G++ G + +GP G+PG Sbjct: 1360 GKRGPPGAAGAEGRQGEKGAKGEAGAEGPPGKT--------------GPVGPQGPAGKPG 1405 Query: 991 V-GIR-FEGPLVQQG--GGMRFEGPSVPGG-----GLR----------------IEGPLG 1025 G+R GP+ +QG G +GP P G GL+ + GP G Sbjct: 1406 PEGLRGIPGPVGEQGLPGAAGQDGPPGPMGPPGLPGLKGDPGSKGEKGHPGLIGLIGPPG 1465 Query: 1026 QGG-------PRFEGCHALRFDGQ---PGQPSLLPRFDGLHGQPGPRFER---------- 1065 + G P +G + DG P P P GL G GP+ + Sbjct: 1466 EQGEKGDRGLPGTQGSPGAKGDGGIPGPAGPLGPPGPPGLPGPQGPKGNKGSTGPAGQKG 1525 Query: 1066 TPGQPGPQRFDGPPGQQVQP 1085 G PGP GPPG+ +QP Sbjct: 1526 DSGLPGPPGSPGPPGEVIQP 1545 Score = 73.9 bits (180), Expect = 1e-12 Identities = 106/333 (31%), Positives = 127/333 (38%), Gaps = 81/333 (24%) Query: 780 IDGPPTPASLRFDGSPGQMGGGGPLRFEGPQGQLGGGCPLRFEGPPGPVGTPLRFEGPIG 839 ++GPP PA GP GP G +GP GP G P GP G Sbjct: 440 VEGPPGPA--------------GPAGIMGPPG---------LQGPTGPPGDP-GDRGPPG 475 Query: 840 QAGGGGFRFEGSPGLRFEGSPGGL-----RFEGPG--GQPVGGLRFEGHRGQPVGGLRFE 892 + G G+ GL G PG + R+ G G G + + + Sbjct: 476 RPG-----LPGADGL--PGPPGTMLMLPFRYGGDGSKGPTISAQEAQAQAILQQARIALR 528 Query: 893 GPHGQPVGGLRFDNPRGQPVGGLRFEGGHGPSGAAIRFDGPHGQPGGGIRFEGPLLQQGV 952 GP G P+G R PVGG G G SG GP G P G GP + G Sbjct: 529 GPPG-PMG----LTGRPGPVGGPGSSGAKGESGD----PGPQG-PRGVQGPPGPTGKPGK 578 Query: 953 GMRFEGPHGQSVAGLRFEGQHNQLGGNLRFEGPHGQPG-VGIRFE-GPLVQQG----GGM 1006 R G+ + G G+ F+G G PG G R E GP G GM Sbjct: 579 RGRPGADGGRGMPG------EPGAKGDRGFDGLPGLPGDKGHRGERGPQGPPGPPGDDGM 632 Query: 1007 RFEGPSVPGGGLRIE-GPLGQGGPRFEGCHALRFDGQPGQPSLLPRFDGLHGQPGPRFER 1065 R E + GL E GP G GPR G PGQP + G+ G PGP+ Sbjct: 633 RGEDGEIGPRGLPGEAGPRGLLGPR-------GTPGAPGQPGMA----GVDGPPGPK--- 678 Query: 1066 TPGQPGPQRFDGPPGQQVQPRFDGVPQRFDGPQ 1098 G GPQ GPPGQQ P G+P GPQ Sbjct: 679 --GNMGPQGEPGPPGQQGNPGPQGLP----GPQ 705 Score = 64.3 bits (155), Expect = 9e-10 Identities = 115/394 (29%), Positives = 140/394 (35%), Gaps = 57/394 (14%) Query: 809 PQGQLGGGCPLRFEGPPGPVGTPLRFEGPIGQAGGGGFRFEGSPGLRFEGSPGGLRFEGP 868 P + G G P + T + G G+ G G PG+ EG PG GP Sbjct: 397 PNEEFGPGVPAETD----ITETSINGHGAYGEKGQKGEPAVVEPGMLVEGPPGP---AGP 449 Query: 869 GGQPVGGLRFEGHRGQPVGGLRFEGPHGQPVGGLRFDNPRGQPVGGLRFE---GGHGPSG 925 G +G +G G P G GP G+P G D G P L GG G G Sbjct: 450 AG-IMGPPGLQGPTGPP-GDPGDRGPPGRP-GLPGADGLPGPPGTMLMLPFRYGGDGSKG 506 Query: 926 AAIRFDGPHGQ---PGGGIRFEGPLLQQGVGMRFEGPHGQSVAGLRFEGQHNQLGGNLRF 982 I Q I GP G+ R G +G + E G Sbjct: 507 PTISAQEAQAQAILQQARIALRGPPGPMGLTGRPGPVGGPGSSGAKGESGDPGPQGPRGV 566 Query: 983 EGPHGQPGVGIRFEGPLVQQGGGM----------RFEG-PSVPG--GGLRIEGPLGQGGP 1029 +GP G G + P G GM F+G P +PG G GP G GP Sbjct: 567 QGPPGPTGKPGKRGRPGADGGRGMPGEPGAKGDRGFDGLPGLPGDKGHRGERGPQGPPGP 626 Query: 1030 RFEGCHALR-FDGQPGQPSLLPRFDGLHGQPGPR-FERTPGQPGPQRFDGPPGQQVQPRF 1087 G +R DG+ G P LP G G GPR PGQPG DGPPG P+ Sbjct: 627 --PGDDGMRGEDGEIG-PRGLPGEAGPRGLLGPRGTPGAPGQPGMAGVDGPPG----PKG 679 Query: 1088 DGVPQRFDGPQHQQASRFDIPLGLQGTRFDNHPSQRLESVSFNQTGPYNDP-----PGNA 1142 + PQ GP QQ + P GL G + P + GP P PG Sbjct: 680 NMGPQGEPGPPGQQGN--PGPQGLPGPQGPIGPP--------GEKGPQGKPGLAGLPGAD 729 Query: 1143 FNAPSQGLQFQRHEQIFDSPQGP----NFNGPHG 1172 G + Q E+ P GP + GP G Sbjct: 730 GPPGHPGKEGQSGEKGALGPPGPQGPIGYPGPRG 763 >gi|40805823 collagen, type XXII, alpha 1 [Homo sapiens] Length = 1626 Score = 98.2 bits (243), Expect = 5e-20 Identities = 113/353 (32%), Positives = 145/353 (41%), Gaps = 85/353 (24%) Query: 783 PPTPASLRFD-----------GSPGQMGGGGPLRFEGPQGQLGGGCPLRFEGPPGPVGT- 830 PPTP S + G G+MG GP+ GP+G +G P+ GP G G Sbjct: 460 PPTPGSEQIGFLKTINCSCPAGEKGEMGVAGPMGLPGPKGDIGAIGPVGAPGPKGEKGDV 519 Query: 831 --------------PLRFEGPIGQAGGGGFRFEGSPG-LRFEGSPGGLRFEGPGGQP--- 872 L GP G+ G G R G PG L G PG + GP G P Sbjct: 520 GIGPFGQGEKGEKGSLGLPGPPGRDGSKGMR--GEPGELGEPGLPGEVGMRGPQGPPGLP 577 Query: 873 -----VGGLRFEGHRGQPVGGLRFEGPHGQPVGGLRFDNPRGQPVGGLRFEGGHGPSGAA 927 VG +G RG+ +G G+ G D G+P G +G GPSG A Sbjct: 578 GPPGRVGAPGLQGERGE-------KGTRGEK-GERGLDGFPGKP-GDTGQQGRPGPSGVA 628 Query: 928 --------IRFDGPHGQPGGGIRFEGPLLQQGVGMRFEGPHGQSVA----GLRFEGQHNQ 975 + GP G PG ++ EG +QG GP G A G R Sbjct: 629 GPQGEKGDVGPAGPPGVPGSVVQQEGLKGEQGA----PGPRGHQGAPGPPGAR------- 677 Query: 976 LGGNLRFEGPHGQPGV-GIR-FEGPLVQQG--GGMRFEGPSVPGGGLRIEGPLGQGG-PR 1030 G + EG G PG+ G+R +G + G G + +GP P G + GP G GG P Sbjct: 678 --GPIGPEGRDGPPGLQGLRGKKGDMGPPGIPGLLGLQGPPGPPG---VPGPPGPGGSPG 732 Query: 1031 FEGCHALRFDGQPGQPSLL--PRFDGLHGQPGPRFERTPGQPGPQRFDGPPGQ 1081 G + F G+PG P P DG +G PGP T G+PG + DG PG+ Sbjct: 733 LPG--EIGFPGKPGPPGPTGPPGKDGPNGPPGP--PGTKGEPGERGEDGLPGK 781 Score = 95.1 bits (235), Expect = 5e-19 Identities = 114/340 (33%), Positives = 139/340 (40%), Gaps = 65/340 (19%) Query: 792 DGSPGQMGGGGPLRFEGPQGQLGGGCPLRFEGPPGPVGTPLRFEGPIGQAGGGGFRFE-G 850 +G PG+ G GP +GPQG G P G PG G P GP G G G + E G Sbjct: 1302 EGLPGKDGDTGPTGPQGPQGPRG---PPGKNGSPGSPGEP----GPSGTPGQKGSKGENG 1354 Query: 851 SPGLRFEGSPGGLRFEGPGGQP--VGGLRFEGHRGQPVGGLRFEGPHGQPVGGLRFDNP- 907 SPGL PG L GP G+P G EG G+P G F+G G P G++ D Sbjct: 1355 SPGL-----PGFLGPRGPPGEPGEKGVPGKEGVPGKP-GEPGFKGERGDP--GIKGDKGP 1406 Query: 908 ---RGQPVGGLRFEGGHGPSGAAIRFDGPHGQPG--GGIRFEGPLLQQGV-GMRFEGPHG 961 +GQP G G G +G GP G PG G + GP Q G G+R E P Sbjct: 1407 PGGKGQP-GDPGIPGHKGHTGLM----GPQGLPGENGPVGPPGPPGQPGFPGLRGESPSM 1461 Query: 962 QSVAGLRFEGQHNQLGGNLRF----------------EGPHGQPGVGIRFEGPLVQQGGG 1005 +++ L E QL L + GP G PG + L + G Sbjct: 1462 ETLRRLIQEELGKQLETRLAYLLAQMPPAYMKSSQGRPGPPGPPG-----KDGLPGRAGP 1516 Query: 1006 MRFEGPSVPGGGLRIEGPLGQGGPRFEGCHALRFDGQPGQPSL-------LPRFDGLHGQ 1058 M G GG +EGP G GP+ E G PG P + P G G+ Sbjct: 1517 MGEPGRPGQGG---LEGPSGPIGPKGER----GAKGDPGAPGVGLRGEMGPPGIPGQPGE 1569 Query: 1059 PGPRFERTPGQPGPQRFDGPPGQQVQPRFDGVPQRFDGPQ 1098 PG + PG PGPQ GP G P G P + D Q Sbjct: 1570 PGYAKDGLPGIPGPQGETGPAGHPGLPGPPGPPGQCDPSQ 1609 Score = 89.0 bits (219), Expect = 3e-17 Identities = 113/336 (33%), Positives = 138/336 (41%), Gaps = 63/336 (18%) Query: 793 GSPGQMGGGGPLRF---EGPQGQLGGGCPLRFEGPPGPVGTPLR--------FEGPIGQA 841 G+PG G G + EG G+ G P +GP GP G P + GP G Sbjct: 1285 GAPGPRGESGAMGLPGQEGLPGKDGDTGPTGPQGPQGPRGPPGKNGSPGSPGEPGPSGTP 1344 Query: 842 GGGGFRFE-GSPGLRFEGSPGGLRFEGPGGQP--VGGLRFEGHRGQPVGGLRFEGPHGQP 898 G G + E GSPGL PG L GP G+P G EG G+P G F+G G P Sbjct: 1345 GQKGSKGENGSPGL-----PGFLGPRGPPGEPGEKGVPGKEGVPGKP-GEPGFKGERGDP 1398 Query: 899 VGGLRFD----NPRGQPVGGLRFEGGHGPSGAAIRFDGPHGQPG--GGIRFEGPLLQQGV 952 G++ D +GQP G G G +G GP G PG G + GP Q G Sbjct: 1399 --GIKGDKGPPGGKGQP-GDPGIPGHKGHTGLM----GPQGLPGENGPVGPPGPPGQPGF 1451 Query: 953 -GMRFEGPHGQSVAGLRFEGQHNQLGGNLRF-------------------EGPHGQPGVG 992 G+R E P +++ L E QL L + GP G+ G+ Sbjct: 1452 PGLRGESPSMETLRRLIQEELGKQLETRLAYLLAQMPPAYMKSSQGRPGPPGPPGKDGLP 1511 Query: 993 IRFEGPLVQQG--GGMRFEGPSVPGGGLRIEGPLGQGGPRFEGCHALR----FDGQPGQP 1046 R GP+ + G G EGPS P G G G G G GQPG+P Sbjct: 1512 GR-AGPMGEPGRPGQGGLEGPSGPIGPKGERGAKGDPGAPGVGLRGEMGPPGIPGQPGEP 1570 Query: 1047 SLLPRFDGLHGQPGPRFERTP-GQPGPQRFDGPPGQ 1081 DGL G PGP+ E P G PG GPPGQ Sbjct: 1571 GYAK--DGLPGIPGPQGETGPAGHPGLPGPPGPPGQ 1604 Score = 85.5 bits (210), Expect = 4e-16 Identities = 128/442 (28%), Positives = 166/442 (37%), Gaps = 61/442 (13%) Query: 754 GPSRPSVAR--DGPTKMIFEGPNKLSPRIDGPPTPASLRFDGSPGQMGGGGPLRFEGPQG 811 GP+ P A+ +G N +P G P P+ G PG +G G G G Sbjct: 895 GPTGPPGAKGQEGAHGAPGAAGNPGAPGHVGAPGPS-----GPPGSVGAPGLRGTPGKDG 949 Query: 812 QLGGGCPLRFEGPPGPVGTPLRFEGPIGQAGGGGFRFEGSPGLRFEGSPGGLRFEGPGGQ 871 + G EG PGPVG P G G G G +G PGLR GSPG GP G Sbjct: 950 ERGEKGAAGEEGSPGPVG-PRGDPGAPGLPGPPGKGKDGEPGLR--GSPG---LPGPLGT 1003 Query: 872 PVGGLRFEGHRGQPVGGLRFEGPHGQPVGGLRFDNPRGQPVGGLRFEGGHGPSGAAIRFD 931 + G +GG +G G P G RG P G+ G GPSG Sbjct: 1004 KAACGKVRGSENCALGGQCVKGDRGAP-GIPGSPGSRGDP--GIGVAGPPGPSGPP---- 1056 Query: 932 GPHGQPG--GGIRFEGPLLQQGVGMRF--------EGPHGQ-SVAGLRFEGQHNQLGGNL 980 G G PG G F GP QG R GP G+ ++ L G N L ++ Sbjct: 1057 GDKGSPGSRGLPGFPGP---QGPAGRDGAPGNPGERGPPGKPGLSSLLSPGDINLLAKDV 1113 Query: 981 RFEGPHGQPGV----GIRFEGPLVQQGGGMRFEGPSVPGGGLRIEGPLGQGGPRFEGCHA 1036 + P G PG+ G + + + + G EG G + GP G GP+ Sbjct: 1114 CNDCPPGPPGLPGLPGFKGDKGVPGKPGREGTEGKKGEAGPPGLPGPPGIAGPQ------ 1167 Query: 1037 LRFDGQPGQPSLLPRFDGLHGQPGPRFERTPGQPGPQRFDGPPGQQVQPRFDGVPQRFDG 1096 G G+ DG GQ G + G PG F GPPG P DG+ Sbjct: 1168 ----GSQGERGA----DGEVGQKGDQ-----GHPGVPGFMGPPGNPGPPGADGIAGAAGP 1214 Query: 1097 PQHQQASRFDIPLGLQG-TRFDNHPSQRLESVSFNQTGPYNDPPGNAFNAPSQGLQFQRH 1155 P Q + + P G QG + P + + + GP + PG A G + R Sbjct: 1215 PGIQGSPGKEGPPGPQGPSGLPGIPGEEGKEGRDGKPGPPGE-PGKAGEPGLPGPEGARG 1273 Query: 1156 EQIFDSPQGPNFNGPHGPGNQS 1177 F G +G GP +S Sbjct: 1274 PPGFKGHTGD--SGAPGPRGES 1293 Score = 78.2 bits (191), Expect = 6e-14 Identities = 152/541 (28%), Positives = 192/541 (35%), Gaps = 119/541 (21%) Query: 778 PRIDGPPTPASLRFDGSPGQMGGGGPLRFEGPQGQLGGGCPLRFEGPPGPVGTPLRFEGP 837 P + GPP P G PG++G G GP G G P GPPGP GT +G Sbjct: 719 PGVPGPPGPGGS--PGLPGEIGFPGKPGPPGPTGPPGKDGP---NGPPGPPGT----KGE 769 Query: 838 IGQAGGGGFRFEGSPGLRFEGSPGGLRF----EGPGGQPVGGLRFEGHRGQPVGGLRFEG 893 G+ G G G PGLR E GL +G G P G F G RG+ G +G Sbjct: 770 PGERGEDGL--PGKPGLRGEIGEQGLAGRPGEKGEAGLP-GAPGFPGVRGEK-GDQGEKG 825 Query: 894 PHGQPVGGLRFDN-------PRGQPVGGL-----------RFEGGHGPSGAAIRFDGPHG 935 G P GL+ D P G P GL R G GP G G G Sbjct: 826 ELGLP--GLKGDRGEKGEAGPAGPP--GLPGTTSLFTPHPRMPGEQGPKGEK-GDPGLPG 880 Query: 936 QPG-----GGIRFEGPLLQQGVGMRFEGPHGQSVAGLRFEGQHNQLG--------GNLRF 982 +PG G + +GP G + EG HG A G +G G++ Sbjct: 881 EPGLQGRPGELGPQGPTGPPGAKGQ-EGAHGAPGAAGN-PGAPGHVGAPGPSGPPGSVGA 938 Query: 983 EGPHGQPGV-GIRFEGPLVQQGGGMRFEGPSVPGGGLRIEGPLGQGGPRFEGCHALRFDG 1041 G G PG G R E + G GP G + GP G+G +G LR G Sbjct: 939 PGLRGTPGKDGERGEKGAAGEEGSPGPVGPRGDPGAPGLPGPPGKGK---DGEPGLR--G 993 Query: 1042 QPGQPSLLPR-------------------------FDGLHGQPGPRFERTPGQPGPQRFD 1076 PG P L G+ G PG R + G GP Sbjct: 994 SPGLPGPLGTKAACGKVRGSENCALGGQCVKGDRGAPGIPGSPGSRGDPGIGVAGPPGPS 1053 Query: 1077 GPPGQQVQPRFDGVPQRFDGPQHQQASRFDIPLGLQGTRFDNHPSQRLESVSFNQTGPYN 1136 GPPG + P G+P F GPQ P G G +P +R GP Sbjct: 1054 GPPGDKGSPGSRGLP-GFPGPQG--------PAGRDGA--PGNPGER---------GPPG 1093 Query: 1137 DPPGNAFNAPSQGLQFQRHEQIFDSPQGPNFNGPHGPGNQSFSNPLNRASGHYFDEKNLQ 1196 P ++ +P + + D P GP P PG F + + Sbjct: 1094 KPGLSSLLSPGD-INLLAKDVCNDCPPGP----PGLPGLPGFKGDKGVPGKPGREGTEGK 1148 Query: 1197 SSQFGNFGNIPAPMTVGNIQASQQVLSGVAQPVAFGQ-GQQFLPVHPQNPGFVQNPSGAL 1255 + G G +P P + Q SQ + A G+ GQ+ HP PGF+ P Sbjct: 1149 KGEAGPPG-LPGPPGIAGPQGSQ------GERGADGEVGQKGDQGHPGVPGFMGPPGNPG 1201 Query: 1256 P 1256 P Sbjct: 1202 P 1202 Score = 76.6 bits (187), Expect = 2e-13 Identities = 117/399 (29%), Positives = 141/399 (35%), Gaps = 114/399 (28%) Query: 778 PRIDGPPTPASLRFDGSPGQMGGGGPLRFEGPQGQLGGGCPLRFEGPPGPVGTPLRFEGP 837 P + GPP A + GS G+ G G + +G QG G P F GPPG G P +G Sbjct: 1155 PGLPGPPGIAGPQ--GSQGERGADGEVGQKGDQGH--PGVP-GFMGPPGNPGPP-GADGI 1208 Query: 838 IGQAGGGGFRFEGSPGLRFEGSPGGLRFEGPGGQP--VGGLRFEGHRGQPVGGLRFEGPH 895 G AG G +GSPG EG PG +GP G P G EG G+P GP Sbjct: 1209 AGAAGPPGI--QGSPGK--EGPPGP---QGPSGLPGIPGEEGKEGRDGKP-------GPP 1254 Query: 896 GQPVGGLRFDNPRGQPVGGLRFEGGHGPSGAAIRFDGPHGQPGGGIRFEGPLLQQGVGMR 955 G+P G+P G GP GA G PG F+G G Sbjct: 1255 GEP-------GKAGEP-------GLPGPEGA-------RGPPG----FKGHTGDSGA--- 1286 Query: 956 FEGPHGQSVAGLRFEGQHNQLGGNLRFEGPHGQPGVGIRFEGPLVQQGGGMRFEGPSVPG 1015 GP G+S G + G G PG + G GP+ P Sbjct: 1287 -PGPRGES--------------GAMGLPGQEGLPG----------KDGD----TGPTGPQ 1317 Query: 1016 GGLRIEGPLGQGGPRFEGCHALRFDGQPGQPSLLPRFDGLHGQPGPRFERTPGQPGPQRF 1075 G GP G+ G G PG+P G GQ G + E G PG F Sbjct: 1318 GPQGPRGPPGKNGS----------PGSPGEPGP----SGTPGQKGSKGEN--GSPGLPGF 1361 Query: 1076 DGPPGQQVQPRFDGVPQRFDGPQHQQASRFDIPLGLQGTRFDNHPSQRLESVSFNQTGPY 1135 GP G +P GVP + P F G G + D Sbjct: 1362 LGPRGPPGEPGEKGVPGKEGVPGKPGEPGFKGERGDPGIKGD------------------ 1403 Query: 1136 NDPPGNAFNAPSQGLQFQRHEQIFDSPQG-PNFNGPHGP 1173 PPG G+ + PQG P NGP GP Sbjct: 1404 KGPPGGKGQPGDPGIPGHKGHTGLMGPQGLPGENGPVGP 1442 Score = 37.4 bits (85), Expect = 0.11 Identities = 47/161 (29%), Positives = 66/161 (40%), Gaps = 24/161 (14%) Query: 978 GNLRFEGPHGQPGVGIRFEGPLVQQG--GGMRFEGPSVPGGGLRIEGPLGQGGPRFEGCH 1035 G + GP G PG P G G + GP G + I GP GQG +G Sbjct: 484 GEMGVAGPMGLPG-------PKGDIGAIGPVGAPGPKGEKGDVGI-GPFGQGEKGEKG-- 533 Query: 1036 ALRFDGQPGQPSLLPRFDGLHGQPGPRFER-TPGQPGPQRFDGPPGQQVQPRFDGVPQRF 1094 +L G PG+ G+ G+PG E PG+ G + GPPG P G P Sbjct: 534 SLGLPGPPGRDGS----KGMRGEPGELGEPGLPGEVGMRGPQGPPGLPGPPGRVGAP-GL 588 Query: 1095 DGPQHQQASRFDIPLGLQGTR-FDNHPSQRLESVSFNQTGP 1134 G + ++ +R G +G R D P + ++ + GP Sbjct: 589 QGERGEKGTR-----GEKGERGLDGFPGKPGDTGQQGRPGP 624 >gi|89363017 alpha 2 type V collagen preproprotein [Homo sapiens] Length = 1499 Score = 97.4 bits (241), Expect = 9e-20 Identities = 144/439 (32%), Positives = 175/439 (39%), Gaps = 87/439 (19%) Query: 753 DGPSRPSVA-------RDGPTKMIFEGPNKLSPRIDGPPTPASLRFDGSPGQMGGGGPLR 805 DG SRP A + G + P + P GP P L+ GQ GG GP Sbjct: 185 DGLSRPFSAQMAGLDEKSGLGSQVGLMPGSVGPV--GPRGPQGLQ-----GQQGGAGPTG 237 Query: 806 FEGPQGQLGGGCPLRFEGPPGPVGTPLRFEGPIGQAGGGGFRFEGSPG-LRFEGSPGGLR 864 G G G P+ GP GP G P G G+ G G+PG + F GSPG Sbjct: 238 PPGEPGDPGPMGPIGSRGPEGPPGKP----GEDGEPGR-----NGNPGEVGFAGSPGARG 288 Query: 865 FEGPGGQPVGGLRFEGHRGQPVGGLRFEGPHGQPVGGLRFDNPRGQPVGGLRFEGGHGPS 924 F G G P GL+ GHRG GL EGP G+ VG +G GP+ Sbjct: 289 FPGAPGLP--GLK--GHRGHK--GL--EGPKGE--------------VGAPGSKGEAGPT 326 Query: 925 G--AAIRFDGPHGQPGGGIRFEGPLLQQGVGMRFEGPHGQSVAGLRFEGQHNQLGGNLRF 982 G A+ GP G PG R GP Q G R G HG G+ + G L Sbjct: 327 GPMGAMGPLGPRGMPGERGRL-GP--QGAPGQR--GAHG-------MPGKPGPM-GPLGI 373 Query: 983 EGPHGQPG-VGIRFE-GPLVQQGGGMRFEGPSVPGGGLRIEGPLGQGGPRFEGCHALRFD 1040 G G PG G++ E GP +G EGP G GP+ G P G A+ D Sbjct: 374 PGSSGFPGNPGMKGEAGPTGARGP----EGPQGQRGETGPPGPV--GSPGLPG--AIGTD 425 Query: 1041 GQPGQ--PSLLPRFDGLHGQPGPRFERTPGQPGPQRFDGPPGQQVQPRFDGVP--QRFDG 1096 G PG P+ P G G GP PG PGPQ GP G + QP GVP + G Sbjct: 426 GTPGAKGPTGSPGTSGPPGSAGP-----PGSPGPQGSTGPQGIRGQPGDPGVPGFKGEAG 480 Query: 1097 PQHQQASR-FDIPLGLQGTRFDNHPSQRLESVSFNQTGPYND--PPGNAFNAPSQGLQFQ 1153 P+ + P+G G P R + + GP + PGN S GL Sbjct: 481 PKGEPGPHGIQGPIGPPGEEGKRGP--RGDPGTVGPPGPVGERGAPGNRGFPGSDGLPGP 538 Query: 1154 RHEQIFDSPQGPNFNGPHG 1172 + Q P G +GP G Sbjct: 539 KGAQGERGPVGS--SGPKG 555 Score = 89.7 bits (221), Expect = 2e-17 Identities = 111/324 (34%), Positives = 132/324 (40%), Gaps = 51/324 (15%) Query: 778 PRIDGPPTPASLRFDGSPGQMGGGGPLRFEGPQGQLGGGCPLRFEGPPGPVGTPLRFEGP 837 P GP P R G+PG+ G G G +G GG P +G PGP GTP GP Sbjct: 701 PGAVGPLGPRGER--GNPGERGEPGITGLPGEKGMAGGHGPDGPKGSPGPSGTP-GDTGP 757 Query: 838 IGQAGGGGFR-FEGSPGLRFEGSPGGLRFEGPGGQPVGGLRFEGHRGQPVGGLRFEGPHG 896 G G G R G+PG + G GG+ +G G +G RG P G L GP G Sbjct: 758 PGLQGMPGERGIAGTPGPK--GDRGGIGEKGAEGTAGN----DGARGLP-GPLGPPGPAG 810 Query: 897 QPVGGLRFDNPRG--QPVGGLRFEGGHGPSG--AAIRFDGPHGQPG-GGIRFEGPLLQQG 951 P G PRG P G G G +G A+ F GP G G G++ E Q Sbjct: 811 -PTGEKGEPGPRGLVGPPGSRGNPGSRGENGPTGAVGFAGPQGPDGQPGVKGEPGEPGQK 869 Query: 952 VGMRFEGPHGQSVAGLRFEGQHNQLGGNLRFEGPHGQPGV--GIRFEGPLVQQG--GGMR 1007 GP G L G+ GP+G PG+ G +GP G G Sbjct: 870 GDAGSPGPQG--------------LAGSPGPHGPNGVPGLKGGRGTQGPPGATGFPGSAG 915 Query: 1008 FEGPSVPGGGLRIEGPLGQGGPRFEGCHALRFDGQPGQPSLLPRFDGLHGQPGPRFERTP 1067 GP P G GPLG+ G EG LR G PG + G G GP P Sbjct: 916 RVGPPGPAGAPGPAGPLGEPGK--EGPPGLR--GDPGSHGRV----GDRGPAGP-----P 962 Query: 1068 GQPGPQRFDGPPGQQVQPRFDGVP 1091 G PG + G PG+ QP DG P Sbjct: 963 GGPGDK---GDPGEDGQPGPDGPP 983 Score = 84.7 bits (208), Expect = 6e-16 Identities = 122/359 (33%), Positives = 141/359 (39%), Gaps = 81/359 (22%) Query: 754 GPSRPSVARDGPTKMIFEGPNKLSPRIDGPPTPASLRFD-GSPGQMGGGGPLRFEGPQGQ 812 GP P+ A GP + E P +GPP LR D GS G++G GP GP G Sbjct: 918 GPPGPAGA-PGPAGPLGE------PGKEGPP---GLRGDPGSHGRVGDRGPA---GPPGG 964 Query: 813 LGGGCPLRFEGPPGPVGTPLRFEGPIGQAGGGGFRFEGSPGLRFE-GSPGGLRFEGPGGQ 871 G +G PGP G P GP G G G G PG R E G PG GP G Sbjct: 965 PGDKGDPGEDGQPGPDGPP----GPAGTTGQRGI--VGMPGQRGERGMPG---LPGPAGT 1015 Query: 872 P--VGGLRFEGHRGQP--VGGLRFEGPHGQP--VGGLRFDNPRGQP--VGGLRFEGGHGP 923 P VG G +G P VG GP G+P G D G+ VG G GP Sbjct: 1016 PGKVGPTGATGDKGPPGPVGPPGSNGPVGEPGPEGPAGNDGTPGRDGAVGERGDRGDPGP 1075 Query: 924 SG-----AAIRFDGPHGQPG-----GGIRFEGPLLQQG-VGMRF----EGPHGQSVAGLR 968 +G A GP G PG G GP+ G G R +GP G Sbjct: 1076 AGLPGSQGAPGTPGPVGAPGDAGQRGDPGSRGPIGPPGRAGKRGLPGPQGPRGD------ 1129 Query: 969 FEGQHNQLG-----GNLRFEGPHGQPGVGIRFEGPLVQQGGGMRFEGPSVPGGGLRIEGP 1023 +G H G G+ F G G PG GP +QG GP P G GP Sbjct: 1130 -KGDHGDRGDRGQKGHRGFTGLQGLPGP----PGPNGEQGSA-GIPGPFGPRGP---PGP 1180 Query: 1024 LGQGGPRFEGCHALRFDGQPGQ--PSLLPRFDGLHGQPGPRFERTPGQPGPQRFDGPPG 1080 +G G +G PG P P G G+ GP E PG+PGP GPPG Sbjct: 1181 VGPSGK----------EGNPGPLGPIGPPGVRGSVGEAGP--EGPPGEPGPPGPPGPPG 1227 Score = 84.3 bits (207), Expect = 8e-16 Identities = 108/328 (32%), Positives = 126/328 (38%), Gaps = 52/328 (15%) Query: 782 GPPTPASLRFDGSPGQMGGGGPLRFEGPQGQLGGGCPLRFEGPPGPVGTPLRFEGPIGQA 841 GPP PA G G+ G GP GP G G GP G VG F GP G Sbjct: 804 GPPGPA-----GPTGEKGEPGPRGLVGPPGSRGNPGSRGENGPTGAVG----FAGPQGPD 854 Query: 842 GGGGFRFE-GSPGLRFE-GSPGGLRFEGPGGQ--PVGGLRFEGHRGQ--PVGGLRFEGPH 895 G G + E G PG + + GSPG G G P G +G RG P G F G Sbjct: 855 GQPGVKGEPGEPGQKGDAGSPGPQGLAGSPGPHGPNGVPGLKGGRGTQGPPGATGFPGSA 914 Query: 896 GQ-----PVGGLRFDNPRGQP----VGGLRFE-GGHGPSGAAIRFDGPHGQPGGGIRFEG 945 G+ P G P G+P GLR + G HG G GP G PGG Sbjct: 915 GRVGPPGPAGAPGPAGPLGEPGKEGPPGLRGDPGSHGRVGDR----GPAGPPGGPGDKGD 970 Query: 946 PLLQQGVGMRFEGPHGQS-VAGLR-FEGQHNQLG--GNLRFEGPHGQPGVGIRFEGPLVQ 1001 P G +GP G + G R G Q G G GP G PG V Sbjct: 971 PGEDGQPGP--DGPPGPAGTTGQRGIVGMPGQRGERGMPGLPGPAGTPGK--------VG 1020 Query: 1002 QGGGMRFEGPSVPGGGLRIEGPLGQGGPRFEGCHALRFDGQPGQPSLLPRFDGLHGQPGP 1061 G +GP P G GP+G+ GP + DG PG+ + G G PGP Sbjct: 1021 PTGATGDKGPPGPVGPPGSNGPVGEPGPEGPAGN----DGTPGRDGAVGE-RGDRGDPGP 1075 Query: 1062 R----FERTPGQPGPQRFDGPPGQQVQP 1085 + PG PGP G GQ+ P Sbjct: 1076 AGLPGSQGAPGTPGPVGAPGDAGQRGDP 1103 Score = 80.5 bits (197), Expect = 1e-14 Identities = 123/411 (29%), Positives = 164/411 (39%), Gaps = 76/411 (18%) Query: 793 GSPGQMGGGGPLRFEGPQGQLGGGCPLRFEGPPGPVGTPLRFEGPIGQAGGGGFR-FEGS 851 G PG G GP+ GP G+ G P G PG VG P GP+G+ G G R F GS Sbjct: 483 GEPGPHGIQGPI---GPPGEEGKRGP---RGDPGTVGPP----GPVGERGAPGNRGFPGS 532 Query: 852 PGLRFEGSPGGLRFEGPGGQPVGGLRFEGHRGQP--VGGLRFEGPHGQPVGGLRFDNPRG 909 GL PG +G G PVG +G +G P G G G G P G Sbjct: 533 DGL-----PGPKGAQGERG-PVGSSGPKGSQGDPGRPGEPGLPGARGL-TGNPGVQGPEG 585 Query: 910 Q--PVGGLRFEGGHGPSGAAIRFDGPHGQPGGGIRFEGPLLQQGVGMRFEGPHGQSVAGL 967 + P+G +G GP G+ G GQP G + GP G + V G Sbjct: 586 KLGPLGAPGEDGRPGPPGSI----GIRGQP-GSMGLPGPKGSSGDPGKPGEAGNAGVPGQ 640 Query: 968 R-FEGQHNQLGGNLRFEGPHGQPGVGIRFEGPLVQQG--GGMRFEG----PSVPGGGLR- 1019 R G+ ++G + GP G PG+ G +QG G F+G P PG G + Sbjct: 641 RGAPGKDGEVGPS----GPVGPPGLA----GERGEQGPPGPTGFQGLPGPPGPPGEGGKP 692 Query: 1020 -------IEGPLGQGGPRFEGCHALRFDGQPGQPSL--LPRFDGL---HGQPGPRFERTP 1067 G +G GPR E + G+ G+P + LP G+ HG GP+ +P Sbjct: 693 GDQGVPGDPGAVGPLGPRGERGN----PGERGEPGITGLPGEKGMAGGHGPDGPK--GSP 746 Query: 1068 GQPGPQRFDGPPGQQVQPRFDGVPQRFDGPQHQQASRFDIPLGLQGTRFDN--------- 1118 G G GPPG Q P G+ GP+ + + G +GT ++ Sbjct: 747 GPSGTPGDTGPPGLQGMPGERGIAGT-PGPKGDRGGIGE--KGAEGTAGNDGARGLPGPL 803 Query: 1119 -HPSQRLESVSFNQTGPYN--DPPGNAFNAPSQGLQFQRHEQIFDSPQGPN 1166 P + + GP PPG+ N S+G F PQGP+ Sbjct: 804 GPPGPAGPTGEKGEPGPRGLVGPPGSRGNPGSRGENGPTGAVGFAGPQGPD 854 Score = 80.1 bits (196), Expect = 2e-14 Identities = 140/446 (31%), Positives = 163/446 (36%), Gaps = 86/446 (19%) Query: 754 GPSRPSVARDGPTKMIFEGPNKLSPRIDGPPTPASLRFDGSPGQMGGGGPLRFEGPQGQL 813 GP R P M GP S P P G PGQ G G GP G + Sbjct: 600 GPPGSIGIRGQPGSMGLPGPKGSS---GDPGKPGEAGNAGVPGQRGAPGKDGEVGPSGPV 656 Query: 814 G--GGCPLRFE-GPPGPVGTPLRFEGPIGQAGGGGFRFEGSPGLRFEGSPGGLRFEGPGG 870 G G R E GPPGP G GP G G G G PG +G PG PG Sbjct: 657 GPPGLAGERGEQGPPGPTGFQ-GLPGPPGPPGEG-----GKPG--DQGVPG-----DPGA 703 Query: 871 QPVGGLRFEGHRGQPVGGLRFEGPHGQP-VGGLRFDNPRGQPVGGLRFEGGHGPSGAAIR 929 VG L G RG P G G+P + GL G GGHGP G Sbjct: 704 --VGPLGPRGERGNP-------GERGEPGITGL---------PGEKGMAGGHGPDGPK-G 744 Query: 930 FDGPHGQPG--GGIRFEGPLLQQGVGMRFEGPHGQSVAGLRFEGQHNQLG--GNLRFEGP 985 GP G PG G +G ++G+ GP G G+ +G G G GP Sbjct: 745 SPGPSGTPGDTGPPGLQGMPGERGIA-GTPGPKGDR-GGIGEKGAEGTAGNDGARGLPGP 802 Query: 986 HGQPG----VGIRFE-------GPLVQQGG-GMRFE-GPSVPGGGLRIEGPLGQGGPRFE 1032 G PG G + E GP +G G R E GP+ G +GP GQ G + E Sbjct: 803 LGPPGPAGPTGEKGEPGPRGLVGPPGSRGNPGSRGENGPTGAVGFAGPQGPDGQPGVKGE 862 Query: 1033 GCHALRFDGQPGQ--PSLLPRFDGLHGQPGPRFER-TPGQPGPQRFDGPPGQQVQPRFDG 1089 G+PGQ + P GL G PGP PG G + GPPG F G Sbjct: 863 -------PGEPGQKGDAGSPGPQGLAGSPGPHGPNGVPGLKGGRGTQGPPG---ATGFPG 912 Query: 1090 VPQRFDGPQHQQASRFDIPLGLQGTRFDNHPSQRLESVSFNQTGPYN--DPPGNAFNAPS 1147 R P A PLG G + P R + S + G PPG + Sbjct: 913 SAGRVGPPGPAGAPGPAGPLGEPGK--EGPPGLRGDPGSHGRVGDRGPAGPPGGPGDKGD 970 Query: 1148 QGLQFQRHEQIFDSPQGPNFNGPHGP 1173 G D GP +GP GP Sbjct: 971 PG---------EDGQPGP--DGPPGP 985 Score = 79.7 bits (195), Expect = 2e-14 Identities = 134/449 (29%), Positives = 161/449 (35%), Gaps = 111/449 (24%) Query: 775 KLSPRID----GPPTPASLRFD----GSPGQMGGGGPLRFEGPQGQLGGGCPLRFEGPPG 826 K PR D GPP P R G PG G GP +G +G +G P +G PG Sbjct: 502 KRGPRGDPGTVGPPGPVGERGAPGNRGFPGSDGLPGPKGAQGERGPVGSSGPKGSQGDPG 561 Query: 827 PVGTP-----------LRFEGPIGQAGGGGFRFE-GSPG----LRFEGSPGGLRFEGPGG 870 G P +GP G+ G G E G PG + G PG + GP G Sbjct: 562 RPGEPGLPGARGLTGNPGVQGPEGKLGPLGAPGEDGRPGPPGSIGIRGQPGSMGLPGPKG 621 Query: 871 Q--------PVGGLRFEGHRGQP--VGGLRFEGPHGQPVGGLRFDNPRGQPVGGLRFEGG 920 G G RG P G + GP G P GL + P G F+G Sbjct: 622 SSGDPGKPGEAGNAGVPGQRGAPGKDGEVGPSGPVGPP--GLAGERGEQGPPGPTGFQGL 679 Query: 921 HGPSGAAIRFDGPHGQPG-----GGIRFEGPLLQQGVGMRFEGPHGQ-SVAGLRFEGQHN 974 GP G G G+PG G GPL +G G G+ + GL G+ Sbjct: 680 PGPPGP----PGEGGKPGDQGVPGDPGAVGPLGPRGERGN-PGERGEPGITGL--PGEKG 732 Query: 975 QLGGNLRFEGPHGQPGVG--IRFEGPLVQQG-----GGMRFEGPSVPGGGLRIEGPLGQG 1027 GG+ +GP G PG GP QG G GP GG+ +G G Sbjct: 733 MAGGH-GPDGPKGSPGPSGTPGDTGPPGLQGMPGERGIAGTPGPKGDRGGIGEKGAEGTA 791 Query: 1028 GPRFEGCHALRFDGQPGQPSLLPRFDGLHGQPGPRFERTPGQPGPQRFDGPPGQQVQPRF 1087 G DG G P L G G GP E+ G+PGP+ GPPG + P Sbjct: 792 GN----------DGARGLPGPL----GPPGPAGPTGEK--GEPGPRGLVGPPGSRGNPGS 835 Query: 1088 DGVPQRFDGPQHQQASRFDIPLGLQGTRFDNHPSQRLESVSFNQTGPYNDP--PGNAFNA 1145 G +GP A F P G G Q G +P PG +A Sbjct: 836 RGE----NGP--TGAVGFAGPQGPDG-----------------QPGVKGEPGEPGQKGDA 872 Query: 1146 PSQGLQFQRHEQIFDSPQG-PNFNGPHGP 1173 S G PQG GPHGP Sbjct: 873 GSPG------------PQGLAGSPGPHGP 889 Score = 76.6 bits (187), Expect = 2e-13 Identities = 135/443 (30%), Positives = 158/443 (35%), Gaps = 103/443 (23%) Query: 772 GPNKL--SPRIDGPPTPASLRFDGSPGQMGGGGPLRFEGPQGQLGGGCPLRFEGPPGPVG 829 GP L SP GP +G PG GG G +GP G G GPPGP G Sbjct: 876 GPQGLAGSPGPHGP--------NGVPGLKGGRGT---QGPPGATGFPGSAGRVGPPGPAG 924 Query: 830 TPLRFEGPIGQAGGGGFRFEGSPGLRFE-GSPGGLRFEGPGGQPVGGLRFEGHRGQPVGG 888 P GP G G G EG PGLR + GS G + GP G P G G +G P G Sbjct: 925 AP----GPAGPLGEPGK--EGPPGLRGDPGSHGRVGDRGPAGPPGG----PGDKGDP-GE 973 Query: 889 LRFEGPHGQP-----------VGGLRFDNPRGQP--VGGLRFEGGHGPSGAAIRFDGPHG 935 GP G P VG RG P G G GP+GA G G Sbjct: 974 DGQPGPDGPPGPAGTTGQRGIVGMPGQRGERGMPGLPGPAGTPGKVGPTGAT----GDKG 1029 Query: 936 QPG--GGIRFEGPLLQQGVGMRFEGPHGQSVAGLRFEGQHNQLG-----GNLRFEGPHGQ 988 PG G GP+ + G EGP G R +G + G G G G Sbjct: 1030 PPGPVGPPGSNGPVGEPGP----EGPAGNDGTPGR-DGAVGERGDRGDPGPAGLPGSQGA 1084 Query: 989 PGVGIRFEGPLVQQGGGMRFEGPSVPGGGLRIEGPLGQGGPRFEGCHALRFDGQPGQPSL 1048 PG GP+ G + P G GP G+ G R G PG Sbjct: 1085 PGT----PGPVGAPGDAGQRGDPGSRGP----IGPPGRAGKR----------GLPGPQG- 1125 Query: 1049 LPRFD-GLHGQPGPRFERTP-GQPGPQRFDGPPGQQVQPRFDGVPQRFDGPQHQQASRFD 1106 PR D G HG G R ++ G G Q GPPG + G+P F GP+ Sbjct: 1126 -PRGDKGDHGDRGDRGQKGHRGFTGLQGLPGPPGPNGEQGSAGIPGPF-GPRGPPG---- 1179 Query: 1107 IPLGLQGTRFDNHPSQRLESVSFNQTGPYNDPPGNAFNAPSQGLQFQRHEQIFDSPQGPN 1166 P+G G + P GP PPG + G + P P Sbjct: 1180 -PVGPSGKEGNPGP-----------LGPIG-PPGVRGSVGEAGPE--------GPPGEPG 1218 Query: 1167 FNGPHGPGNQSFSNPLNRASGHY 1189 GP GP + L GHY Sbjct: 1219 PPGPPGPPGH-LTAALGDIMGHY 1240 Score = 50.4 bits (119), Expect = 1e-05 Identities = 48/147 (32%), Positives = 55/147 (37%), Gaps = 23/147 (15%) Query: 1041 GQPGQPSLLPRFDGLHGQP---------GPRFER----TPGQPGPQRFDGPPGQQVQPRF 1087 GQ G+P L+P G+ G+P GPR ER PG GPQ DG PG QP Sbjct: 113 GQKGEPGLVPVVTGIRGRPGPAGPPGSQGPRGERGPKGRPGPRGPQGIDGEPGVPGQPGA 172 Query: 1088 DGVPQRFDGPQHQQASRFDIPLGLQGTRFDNHPSQRLESVSFNQTGPYNDPPGNAFNAPS 1147 G P P H P Q D +S +Q G G Sbjct: 173 PGPPGH---PSHPGPDGLSRPFSAQMAGLDE------KSGLGSQVGLMPGSVGPVGPRGP 223 Query: 1148 QGLQFQRHEQIFDSPQG-PNFNGPHGP 1173 QGLQ Q+ P G P GP GP Sbjct: 224 QGLQGQQGGAGPTGPPGEPGDPGPMGP 250 >gi|119508426 alpha 3 type IX collagen [Homo sapiens] Length = 684 Score = 97.4 bits (241), Expect = 9e-20 Identities = 122/379 (32%), Positives = 153/379 (40%), Gaps = 72/379 (18%) Query: 755 PSRPSVARDGPTKMIFEGPNKLSPRIDGPPTPASLRFDGSPGQMGGGGPLRFEGPQGQLG 814 P P V +G T + + P+ P GPP P PG G GP ++G QG++G Sbjct: 159 PGHPGVLPEGATDL--QCPSICPP---GPPGP--------PGMPGFKGPTGYKGEQGEVG 205 Query: 815 GGCPLRFEGPPGPVGTPLRFEGPIGQAGGGGFRFEGSPG-LRFEGSPGGLRFEGPGGQPV 873 GPPGP G P G +G G G R G PG L G G + F GP G P Sbjct: 206 KDGEKGDPGPPGPAGLP----GSVGLQGPRGLR--GLPGPLGPPGDRGPIGFRGPPGIP- 258 Query: 874 GGLRFEGHRGQ--------PVGGLRFEGPHGQP-VGGLRFDNPRGQP----------VGG 914 G G RG+ P G L GP G P V G P G+P V G Sbjct: 259 GAPGKAGDRGERGPEGFRGPKGDLGRPGPKGTPGVAG-----PSGEPGMPGKDGQNGVPG 313 Query: 915 LRFEGGHGPSGAAIRFDGPHGQPG--GGIRFEGPLLQQGVG--MRFEGPHGQ-------S 963 L + G A GP+G PG G +G ++G + GP G+ Sbjct: 314 LDGQKGEAGRNGAPGEKGPNGLPGLPGRAGSKGEKGERGRAGELGEAGPSGEPGVPGDAG 373 Query: 964 VAGLRFEGQHNQLGGNLRFEGPHGQPGVGIRFEGPLVQQG--GGMRFEGPSVPGGGLRIE 1021 + G R E H G L +GP G PGV F+G Q+G G GP G + Sbjct: 374 MPGERGEAGHRGSAGALGPQGPPGAPGVR-GFQG---QKGSMGDPGLPGPQGLRGDVGDR 429 Query: 1022 GPLGQGGPRFEGCHALRFDGQPGQPSLL-------PRFD-GLHGQPGPRFERTP-GQPGP 1072 GP G GP+ + A DG PG L P+ + G G+ GP+ + P G G Sbjct: 430 GPGGAAGPKGDQGIA-GSDGLPGDKGELGPSGLVGPKGESGSRGELGPKGTQGPNGTSGV 488 Query: 1073 QRFDGPPGQQVQPRFDGVP 1091 Q GPPG GVP Sbjct: 489 QGVPGPPGPLGLQGVPGVP 507 Score = 89.4 bits (220), Expect = 3e-17 Identities = 128/418 (30%), Positives = 161/418 (38%), Gaps = 74/418 (17%) Query: 793 GSPGQMGGGGPLRFEGPQGQLGGGCPLRFEGPPGPVGTPLRFEGPIGQAGGGGFRFEGSP 852 G PG G GP G G G P GPPGP G P G G+ G G G P Sbjct: 29 GLPGPPGPPGPPGKPGQDGIDGEAGPPGLPGPPGPKGAP----GKPGKPGEAG--LPGLP 82 Query: 853 GLRFEGSPGGLRFEGPGGQPVGGLRFEGHRGQPVGGLRFEGPHGQP-VGGLRFDNPRGQ- 910 G+ +G G GP G P G RG GP G P +GG P G+ Sbjct: 83 GV--DGLTGRDGPPGPKGAP-------GERGS-------LGPPGPPGLGGKGLPGPPGEA 126 Query: 911 ----PVGGLRFEGGHGPSGAAIRFDGPHGQPG----GGIRFEGPLLQQGVGMRFEGPHG- 961 P GG+ G GPSG GP G PG G+ EG Q + GP G Sbjct: 127 GVSGPPGGIGLRGPPGPSGLP-GLPGPPGPPGPPGHPGVLPEGATDLQCPSICPPGPPGP 185 Query: 962 QSVAGLR----FEGQHNQLG-----GNLRFEGPHGQPGVGIRFEGPLVQQGGGMRFEGPS 1012 + G + ++G+ ++G G+ GP G PG + +GP +G GP Sbjct: 186 PGMPGFKGPTGYKGEQGEVGKDGEKGDPGPPGPAGLPG-SVGLQGPRGLRG----LPGPL 240 Query: 1013 VPGGGLRIEGPLG-QGGPRFEGCHALRFDGQPGQPSLLPRFDGLHGQPGPRFERTPGQPG 1071 P G GP+G +G P G D P G G+PGP+ TPG G Sbjct: 241 GPPGD---RGPIGFRGPPGIPGAPGKAGDRGERGPEGFRGPKGDLGRPGPK--GTPGVAG 295 Query: 1072 PQRFDGPPGQQVQPRFDGVPQRFDGPQHQQASRFDI-----PLGLQG----TRFDNHPSQ 1122 P G PG+ Q +GVP DG Q +A R P GL G + Sbjct: 296 PSGEPGMPGKDGQ---NGVP-GLDG-QKGEAGRNGAPGEKGPNGLPGLPGRAGSKGEKGE 350 Query: 1123 RLESVSFNQTGPYNDP--PGNAFNAPSQGLQFQRHEQIFDSPQGPNFNGPHGPGNQSF 1178 R + + GP +P PG+A +G R PQGP P PG + F Sbjct: 351 RGRAGELGEAGPSGEPGVPGDAGMPGERGEAGHRGSAGALGPQGP----PGAPGVRGF 404 Score = 84.3 bits (207), Expect = 8e-16 Identities = 134/429 (31%), Positives = 166/429 (38%), Gaps = 96/429 (22%) Query: 755 PSRPSV----ARDGPTKMIFEGPNKLSPRIDGPPTPASLRFDGSPGQMGGGGP---LRFE 807 P P V RDGP + S GPP G PG+ G GP + Sbjct: 79 PGLPGVDGLTGRDGPPGPKGAPGERGSLGPPGPPGLGGKGLPGPPGEAGVSGPPGGIGLR 138 Query: 808 GPQGQLG-GGCPLRFEGPPGPVGTP-----------------LRFEGPIGQAGGGGFR-- 847 GP G G G P GPPGP G P + GP G G GF+ Sbjct: 139 GPPGPSGLPGLP----GPPGPPGPPGHPGVLPEGATDLQCPSICPPGPPGPPGMPGFKGP 194 Query: 848 --FEGSPG-LRFEGSPGGLRFEGPGGQPVGGLRFEGHRGQPVGGLRFEGPHGQP--VGGL 902 ++G G + +G G GP G P G + +G RG + GL GP G P G + Sbjct: 195 TGYKGEQGEVGKDGEKGDPGPPGPAGLP-GSVGLQGPRG--LRGL--PGPLGPPGDRGPI 249 Query: 903 RFDNPRGQP--VGGLRFEGGHGPSGAAIRFDGPHGQ-----PGGGIRFEGPLLQQGVGMR 955 F P G P G G GP G F GP G P G GP + G+ Sbjct: 250 GFRGPPGIPGAPGKAGDRGERGPEG----FRGPKGDLGRPGPKGTPGVAGPSGEPGM--- 302 Query: 956 FEGPHGQS-VAGLRFEGQHNQLG--GNLRFEGPHGQPGVGIRFEGPLVQQG--GGMRFEG 1010 G GQ+ V GL +GQ + G G +GP+G PG+ R G ++G G G Sbjct: 303 -PGKDGQNGVPGL--DGQKGEAGRNGAPGEKGPNGLPGLPGR-AGSKGEKGERGRAGELG 358 Query: 1011 PSVPGGGLRIEGPLGQGGPRFEGCH-----ALRFDGQPGQPSLLPRFDGLHGQPGPRFER 1065 + P G + G G G R E H AL G PG P + G GQ G + Sbjct: 359 EAGPSGEPGVPGDAGMPGERGEAGHRGSAGALGPQGPPGAPGV----RGFQGQKGSMGD- 413 Query: 1066 TPGQPGPQ--RFD----------GPPGQQVQPRFDGV--------PQRFDGPQHQQASRF 1105 PG PGPQ R D GP G Q DG+ P GP+ + SR Sbjct: 414 -PGLPGPQGLRGDVGDRGPGGAAGPKGDQGIAGSDGLPGDKGELGPSGLVGPKGESGSRG 472 Query: 1106 DI-PLGLQG 1113 ++ P G QG Sbjct: 473 ELGPKGTQG 481 Score = 84.0 bits (206), Expect = 1e-15 Identities = 131/430 (30%), Positives = 155/430 (36%), Gaps = 114/430 (26%) Query: 782 GPPTPASLRFDGSPGQMGGGGPLRFEGPQGQLGGGCPLRFEGPPGPVGTPLRFEGPIGQA 841 GPP PA L GS G G G GP G G P+ F GPPG G P + G G+ Sbjct: 214 GPPGPAGL--PGSVGLQGPRGLRGLPGPLGPPGDRGPIGFRGPPGIPGAPGK-AGDRGER 270 Query: 842 GGGGFRFE----GSPGLRFEGSPGGLRFEGPGGQP----------VGGLRFEGHRGQPV- 886 G GFR G PG + G+PG GP G+P V GL +G +G+ Sbjct: 271 GPEGFRGPKGDLGRPGPK--GTPG---VAGPSGEPGMPGKDGQNGVPGL--DGQKGEAGR 323 Query: 887 -GGLRFEGPHGQP-----------------VGGLRFDNPRGQP-------VGGLRFEGGH 921 G +GP+G P G L P G+P + G R E GH Sbjct: 324 NGAPGEKGPNGLPGLPGRAGSKGEKGERGRAGELGEAGPSGEPGVPGDAGMPGERGEAGH 383 Query: 922 GPSGAAIRFDGPHGQPG-----------GGIRFEGPL-LQQGVGMR----FEGPHG-QSV 964 S A+ GP G PG G GP L+ VG R GP G Q + Sbjct: 384 RGSAGALGPQGPPGAPGVRGFQGQKGSMGDPGLPGPQGLRGDVGDRGPGGAAGPKGDQGI 443 Query: 965 AGLR-FEGQHNQLGGNLRFEGPHGQPGVGIRFEGPLVQQGGGMRFEGPSVPGGGLRIEGP 1023 AG G +LG + GP G+ G GP QG VPG GP Sbjct: 444 AGSDGLPGDKGELGPS-GLVGPKGESGSRGEL-GPKGTQGPNGTSGVQGVPGP----PGP 497 Query: 1024 LG-QGGPRFEGCHALRFDGQPGQPSL---------------------------LPRFDGL 1055 LG QG P G G+PG P P G Sbjct: 498 LGLQGVPGVPG-----ITGKPGVPGKEASEQRIRELCGGMISEQIAQLAAHLRKPLAPGS 552 Query: 1056 HGQPGPRFERTPGQPGPQRFDGPPGQQVQPRFDGVPQRF--DGPQHQQASRFD---IPLG 1110 G+PGP PG PGP G PG + P + G GP+ Q R D G Sbjct: 553 IGRPGPA--GPPGPPGPPGSIGHPGARGPPGYRGPTGELGDPGPRGNQGDRGDKGAAGAG 610 Query: 1111 LQGTRFDNHP 1120 L G D P Sbjct: 611 LDGPEGDQGP 620 Score = 62.4 bits (150), Expect = 3e-09 Identities = 97/332 (29%), Positives = 118/332 (35%), Gaps = 61/332 (18%) Query: 793 GSPGQMGGGGPLRFEGPQGQLGGGCPLRFEGPPGPVGTPLRFEGPIGQAGGGGFRFE--- 849 G PG+ G G G G+LG P G PG G P G G G G Sbjct: 337 GLPGRAGSKGEKGERGRAGELGEAGPSGEPGVPGDAGMPGE-RGEAGHRGSAGALGPQGP 395 Query: 850 -GSPGLR-FEGSPGGLRFEG-PGGQPVGGL---RFEGHRGQPVGGLRFEGPHGQP----- 898 G+PG+R F+G G + G PG Q + G R G P G G G P Sbjct: 396 PGAPGVRGFQGQKGSMGDPGLPGPQGLRGDVGDRGPGGAAGPKGDQGIAGSDGLPGDKGE 455 Query: 899 VGGLRFDNPRGQPV--GGLRFEGGHGPSGAAIRFDGPHGQPGGGIRFEGPLLQQGV---- 952 +G P+G+ G L +G GP+G + G G PG GPL QGV Sbjct: 456 LGPSGLVGPKGESGSRGELGPKGTQGPNGTS----GVQGVPGP----PGPLGLQGVPGVP 507 Query: 953 ---------GMRFEGPHGQSVAGLRFEGQHNQLGGNLR---FEGPHGQPGVGIRFEGPLV 1000 G + + G Q QL +LR G G+PG GP Sbjct: 508 GITGKPGVPGKEASEQRIRELCGGMISEQIAQLAAHLRKPLAPGSIGRPGPA----GPPG 563 Query: 1001 QQG--GGMRFEGPSVPGGGLRIEGPLGQGGPRF-------EGCHALRFDGQPGQPSLLPR 1051 G G + G P G G LG GPR +G DG G Sbjct: 564 PPGPPGSIGHPGARGPPGYRGPTGELGDPGPRGNQGDRGDKGAAGAGLDGPEGDQGP--- 620 Query: 1052 FDGLHGQPGPRFER---TPGQPGPQRFDGPPG 1080 G G PG + PG+PGP G PG Sbjct: 621 -QGPQGVPGTSKDGQDGAPGEPGPPGDPGLPG 651 Score = 46.6 bits (109), Expect = 2e-04 Identities = 42/125 (33%), Positives = 50/125 (40%), Gaps = 24/125 (19%) Query: 749 RPLFDGPSRPSVARDGPTKMIFEGPNKLSPRIDGPPTPASLRFDGSPGQMGGGGPLRFEG 808 +PL G S+ R GP GP GPP P GS G G GP + G Sbjct: 546 KPLAPG----SIGRPGPA-----GP-------PGPPGPP-----GSIGHPGARGPPGYRG 584 Query: 809 PQGQLGGGCPLRFEGPPGPVGTP-LRFEGPIGQAGGGGFRFEGSPGLRFEGSPGGLRFEG 867 P G+LG P +G G G +GP G G G +G PG +G G G Sbjct: 585 PTGELGDPGPRGNQGDRGDKGAAGAGLDGPEGDQGPQG--PQGVPGTSKDGQDGAPGEPG 642 Query: 868 PGGQP 872 P G P Sbjct: 643 PPGDP 647 Score = 45.8 bits (107), Expect = 3e-04 Identities = 42/131 (32%), Positives = 53/131 (40%), Gaps = 15/131 (11%) Query: 768 MIFEGPNKLSPRIDGPPTPASLRFDGSPGQMGGGGPLRFEGPQGQLGGGCPLRFEGPPGP 827 MI E +L+ + P P S+ G G G GP G G G P + GP G Sbjct: 532 MISEQIAQLAAHLRKPLAPGSIGRPGPAGPPGPPGP---PGSIGHPGARGPPGYRGPTGE 588 Query: 828 VGTPLRFEGPIGQAGGGGFRFEGSPGLRFEGSPGGLRFEGPGGQPVGGLRFEGHRGQPVG 887 +G P GP G G G + G+ G +G G +GP G P G +G G P Sbjct: 589 LGDP----GPRGNQGDRGDK--GAAGAGLDGPEGDQGPQGPQGVP--GTSKDGQDGAP-- 638 Query: 888 GLRFEGPHGQP 898 GP G P Sbjct: 639 --GEPGPPGDP 647 >gi|116089325 splicing factor, arginine/serine-rich 12 isoform a [Homo sapiens] Length = 624 Score = 97.1 bits (240), Expect = 1e-19 Identities = 124/561 (22%), Positives = 234/561 (41%), Gaps = 90/561 (16%) Query: 138 VNSLDPAWPIKPLPPNVNTSSIHVNPKFLNKSPEEPSTPGTVVSSPSISTPPIVPDIQK- 196 + SL P + P+P +++ V+ L P P + + I PP++ ++ Sbjct: 117 MTSLMPGAGLLPIPTPNPLTTLGVSLSSLGAIPAAALDPN-IATLGEIPQPPLMGNVDPS 175 Query: 197 ------------NLTQEQLIRQQLLAKQKQLLELQQKKLELELEQ----AKAQLAVSLSV 240 NL + QLL KQ+ E++ ++ + Q A + A SV Sbjct: 176 KIDEIRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSV 235 Query: 241 QQETSNLGPGSAPSKLHVSQIPPMAVKAPHQVPVQSEKSRPGPSLQIQDLKG---TNRDP 297 + + G L ++ VK P P + K ++++ + +P Sbjct: 236 PRALAFNGVMFGDRPLKINHSNNAIVKPPEMTPQAAAKELEEVMKRVREAQSFISAAIEP 295 Query: 298 RLNRISQHSHGKDQSHRKEFLMNTLNQSDTKTSKTIPSEKLNSSKQEKSKSGEKITKKEL 357 + ++ G+ +SH + S +++S S + S + +S+S + ++ Sbjct: 296 ESGKSNERKGGRSRSHTR---------SKSRSSSKSHSRRKRSQSKHRSRSHNRSRSRQK 346 Query: 358 DQLDSKS----------KSKSKSPSPLKNKLSHTKDLKNQESESMRLSDMNKRDPRLKKH 407 D+ SKS + KS+S S ++K T++ K +E E ++ D K R K+ Sbjct: 347 DRRRSKSPHKKRSKSRERRKSRSRSHSRDKRKDTRE-KIKEKERVKEKDREKEREREKER 405 Query: 408 LQDKTDGKDDDVKEKRKTAEKKDKD---EHMKSSEHRLAGSRNKIINGIVQKQDTITEES 464 ++K GK+ D ++R+ +KDK+ E + EH + K +K+ +E Sbjct: 406 EKEKERGKNKDRDKEREKDREKDKEKDREREREKEHEKDRDKEK------EKEQDKEKER 459 Query: 465 EKQGTKPGRSSTRKRSRSRSPKSRSPIIHSPKRRDRRS--PKRRQRSMSPTSTPKAGKIR 522 EK +K +K +SR+P P ++ RR R S +RR+RS S + +P+ K Sbjct: 460 EKDRSKEIDEKRKKDKKSRTP----PRSYNASRRSRSSSRERRRRRSRSSSRSPRTSKT- 514 Query: 523 QSGAKQSHMEEFTPPSREDRNAKRSTKQDIRDPRRMKKTEEERPQETTNQHSTKSGTEPK 582 K+ +P SR ++ KR ++D RR E ER +T+ + + + K Sbjct: 515 ---IKRKSSRSPSPRSRNKKDKKREKERDHISERR----ERER---STSMRKSSNDRDGK 564 Query: 583 ENVENWQSSKSAKRWKSGWEENKSLQQVDEHSKPPHLRHRESWSSTKGILSPRAPKQQQH 642 E +E +S K EH+K P S +K + AP+ +++ Sbjct: 565 EKLEKNSTSLKEK----------------EHNKEP------DSSVSKEVDDKDAPRTEEN 602 Query: 643 RLSVDANLQIPKELTLASKRE 663 ++ + N Q+ +E L++K E Sbjct: 603 KIQHNGNCQLNEE-NLSTKTE 622 >gi|21040255 splicing factor, arginine/serine-rich 12 isoform b [Homo sapiens] Length = 508 Score = 97.1 bits (240), Expect = 1e-19 Identities = 124/561 (22%), Positives = 234/561 (41%), Gaps = 90/561 (16%) Query: 138 VNSLDPAWPIKPLPPNVNTSSIHVNPKFLNKSPEEPSTPGTVVSSPSISTPPIVPDIQK- 196 + SL P + P+P +++ V+ L P P + + I PP++ ++ Sbjct: 1 MTSLMPGAGLLPIPTPNPLTTLGVSLSSLGAIPAAALDPN-IATLGEIPQPPLMGNVDPS 59 Query: 197 ------------NLTQEQLIRQQLLAKQKQLLELQQKKLELELEQ----AKAQLAVSLSV 240 NL + QLL KQ+ E++ ++ + Q A + A SV Sbjct: 60 KIDEIRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSV 119 Query: 241 QQETSNLGPGSAPSKLHVSQIPPMAVKAPHQVPVQSEKSRPGPSLQIQDLKG---TNRDP 297 + + G L ++ VK P P + K ++++ + +P Sbjct: 120 PRALAFNGVMFGDRPLKINHSNNAIVKPPEMTPQAAAKELEEVMKRVREAQSFISAAIEP 179 Query: 298 RLNRISQHSHGKDQSHRKEFLMNTLNQSDTKTSKTIPSEKLNSSKQEKSKSGEKITKKEL 357 + ++ G+ +SH + S +++S S + S + +S+S + ++ Sbjct: 180 ESGKSNERKGGRSRSHTR---------SKSRSSSKSHSRRKRSQSKHRSRSHNRSRSRQK 230 Query: 358 DQLDSKS----------KSKSKSPSPLKNKLSHTKDLKNQESESMRLSDMNKRDPRLKKH 407 D+ SKS + KS+S S ++K T++ K +E E ++ D K R K+ Sbjct: 231 DRRRSKSPHKKRSKSRERRKSRSRSHSRDKRKDTRE-KIKEKERVKEKDREKEREREKER 289 Query: 408 LQDKTDGKDDDVKEKRKTAEKKDKD---EHMKSSEHRLAGSRNKIINGIVQKQDTITEES 464 ++K GK+ D ++R+ +KDK+ E + EH + K +K+ +E Sbjct: 290 EKEKERGKNKDRDKEREKDREKDKEKDREREREKEHEKDRDKEK------EKEQDKEKER 343 Query: 465 EKQGTKPGRSSTRKRSRSRSPKSRSPIIHSPKRRDRRS--PKRRQRSMSPTSTPKAGKIR 522 EK +K +K +SR+P P ++ RR R S +RR+RS S + +P+ K Sbjct: 344 EKDRSKEIDEKRKKDKKSRTP----PRSYNASRRSRSSSRERRRRRSRSSSRSPRTSKT- 398 Query: 523 QSGAKQSHMEEFTPPSREDRNAKRSTKQDIRDPRRMKKTEEERPQETTNQHSTKSGTEPK 582 K+ +P SR ++ KR ++D RR E ER +T+ + + + K Sbjct: 399 ---IKRKSSRSPSPRSRNKKDKKREKERDHISERR----ERER---STSMRKSSNDRDGK 448 Query: 583 ENVENWQSSKSAKRWKSGWEENKSLQQVDEHSKPPHLRHRESWSSTKGILSPRAPKQQQH 642 E +E +S K EH+K P S +K + AP+ +++ Sbjct: 449 EKLEKNSTSLKEK----------------EHNKEP------DSSVSKEVDDKDAPRTEEN 486 Query: 643 RLSVDANLQIPKELTLASKRE 663 ++ + N Q+ +E L++K E Sbjct: 487 KIQHNGNCQLNEE-NLSTKTE 506 >gi|32140760 collagen, type XXVII, alpha 1 [Homo sapiens] Length = 1860 Score = 96.7 bits (239), Expect = 2e-19 Identities = 140/413 (33%), Positives = 173/413 (41%), Gaps = 79/413 (19%) Query: 778 PRIDGPPTPASLRFDGSPGQMGGGGPLRFEGPQGQLGGGCPLRFEGPPGPVGTPLRFEGP 837 P + G P L DG+PG++G GP G G LG P+ + GP G G G Sbjct: 792 PGVFGERGPPGL--DGNPGELGLPGPPGVPGLIGDLGVLGPIGYPGPKGMKG----LMGS 845 Query: 838 IGQAGGGGFRFE-GSPGLRFEGSPGGLRFEGPGGQPVGGLRFEGHRGQPVGGLRFEGPHG 896 +G+ G G + E G PG+ G PG +G G P F G RG+P GP G Sbjct: 846 VGEPGLKGDKGEQGVPGV--SGDPGFQGDKGSQGLP----GFPGARGKP-------GPLG 892 Query: 897 Q--PVGGLRFDNPRGQPVGGLRFEGGHGPSGAAIRFDGPHGQPG--GGIRFEGPLLQQGV 952 + G + F P G P G F G GP G +GP G G G GP Q G Sbjct: 893 KVGDKGSIGFPGPPG-PEG---FPGDIGPPGD----NGPEGMKGKPGARGLPGPRGQLG- 943 Query: 953 GMRFEGPHGQSVA-GLRFEGQHNQLG--GNLRFEGPHGQPGVGIRFEGPLVQQGGGMRFE 1009 EGP G A GL EGQ + G G +G G+PG R GP+ +Q G M F Sbjct: 944 PEGDEGPMGPPGAPGL--EGQPGRKGFPGRPGLDGVKGEPGDPGR-PGPVGEQ-GFMGFI 999 Query: 1010 GPSVPGGGLRIEGPLGQGGPRFEGCHALRFDGQPGQPSLLPRFDGLHGQPG-PRFERTPG 1068 G G + +G G GP PG P P+ G G PG P TPG Sbjct: 1000 GLVGEPGIVGEKGDRGMMGP-------------PGVPG--PK--GSMGHPGMPGGMGTPG 1042 Query: 1069 QPGPQRFDGPPGQQVQPRFDGV-----PQRFDGPQHQQASR-FDIPLGLQGTRFDNHPSQ 1122 +PGPQ GPPG + P G P+ DGP +Q SR P G QG P Q Sbjct: 1043 EPGPQ---GPPGSRGPPGMRGAKGRRGPRGPDGPAGEQGSRGLKGPPGPQGR--PGRPGQ 1097 Query: 1123 RLESVSFNQTGPYNDP--PGNAFNAPSQGLQFQRHEQIFDSPQGPNFNGPHGP 1173 + + G P PG + ++GL + PQGP GP GP Sbjct: 1098 QGVAGERGHLGSRGFPGIPGPSGPPGTKGLPGE------PGPQGP--QGPIGP 1142 Score = 91.7 bits (226), Expect = 5e-18 Identities = 133/389 (34%), Positives = 160/389 (41%), Gaps = 71/389 (18%) Query: 777 SPRIDGPPTPASLRFDGSPGQMGGGGPLRFEGPQGQLGGGCPLRFEGPPGPVGTPLR--F 834 +P GP P R G PG G G GP G G +GPPGP G P R Sbjct: 1040 TPGEPGPQGPPGSR--GPPGMRGAKGRRGPRGPDGPAGEQGSRGLKGPPGPQGRPGRPGQ 1097 Query: 835 EGPIGQAGGGGFR-FEGSPGLR----FEGSPGGLRFEGPGGQPVGGLRFEGHRGQP--VG 887 +G G+ G G R F G PG +G PG +GP G P+G G +G P VG Sbjct: 1098 QGVAGERGHLGSRGFPGIPGPSGPPGTKGLPGEPGPQGPQG-PIGPPGEMGPKGPPGAVG 1156 Query: 888 --GLRFE-------GPHGQPVGGLRFDNPRGQPVGGLRFEGGHGPSGA-AIRFD------ 931 GL E GP G P G RG+P GL EG GP G ++ D Sbjct: 1157 EPGLPGEAGMKGDLGPLGTP-GEQGLIGQRGEP--GL--EGDSGPMGPDGLKGDRGDPGP 1211 Query: 932 -GPHGQPG--GGIRFEGPLLQQGV-GMRFEGPHGQS--------VAGLRFEGQHNQLG-- 977 G HG+ G G + +GP GV G+R GP G+S +G QLG Sbjct: 1212 DGEHGEKGQEGLMGEDGPPGPPGVTGVR--GPEGKSGKQGEKGRTGAKGAKGYQGQLGEM 1269 Query: 978 GNLRFEGPHGQPGV-GIRFEGPLVQQGGGMRFEGPSVPG-----GGLRIEGPLGQGGPRF 1031 G GP G PG G R G L G R PG G I GPLG GP+ Sbjct: 1270 GVPGDPGPPGTPGPKGSR--GSLGPTGAPGRMGAQGEPGLAGYDGHKGIVGPLGPPGPKG 1327 Query: 1032 EGCHALRFDGQPGQPSLLPRFDGLHGQPGPRFERT-------PGQPGPQRFDGPPGQQVQ 1084 E G+ G+ P G G G R +R PGQ G Q G PGQQ Q Sbjct: 1328 EKGE----QGEDGKAEGPPGPPGDRGPVGDRGDRGEPGDPGYPGQEGVQGLRGKPGQQGQ 1383 Query: 1085 PRFDGVPQRFDGPQHQQASRFDIPLGLQG 1113 P G P+ + GP+ + + + P G QG Sbjct: 1384 PGHPG-PRGWPGPKGSKGA--EGPKGKQG 1409 Score = 87.8 bits (216), Expect = 7e-17 Identities = 113/329 (34%), Positives = 129/329 (39%), Gaps = 44/329 (13%) Query: 778 PRIDGPP----TPASLRFDGSPGQMGGGGPLRFEGPQGQLGGGCPLRFEGPPGPVGTPLR 833 P + G P S G PG G GPL G +G +G F GPPGP G Sbjct: 861 PGVSGDPGFQGDKGSQGLPGFPGARGKPGPLGKVGDKGSIG------FPGPPGPEG---- 910 Query: 834 FEGPIGQAGGGGFR-FEGSPGLRFEGSPGGLRFEGPGGQ--PVGGLRFEGHRGQPVGGLR 890 F G IG G G +G PG R G PG GP G P+G G GQP G Sbjct: 911 FPGDIGPPGDNGPEGMKGKPGAR--GLPGPRGQLGPEGDEGPMGPPGAPGLEGQP-GRKG 967 Query: 891 FEGPHG-QPVGGLRFDNPRGQPVGGLRFEGGHG----PSGAAIRFD----GPHGQPGGGI 941 F G G V G D R PVG F G G P + D GP G PG Sbjct: 968 FPGRPGLDGVKGEPGDPGRPGPVGEQGFMGFIGLVGEPGIVGEKGDRGMMGPPGVPGPKG 1027 Query: 942 RFEGPLLQQGVGMRFEGPHGQSVAGLRFEGQHNQLGGNLRFEGPHGQPGVGIRFEGPLVQ 1001 P + G+G E P Q G R G G R GP G +GP + Sbjct: 1028 SMGHPGMPGGMGTPGE-PGPQGPPGSR--GPPGMRGAKGR-RGPRGP-------DGPAGE 1076 Query: 1002 QGGGMRFEGPSVPGGGLRIEGPLGQGGPRFEGCHALRFDGQPGQPSLLPRFDGLHGQPGP 1061 Q G +GP P G G G G R + F G PG PS P GL G+PGP Sbjct: 1077 Q-GSRGLKGPPGPQGRPGRPGQQGVAGERGH-LGSRGFPGIPG-PSGPPGTKGLPGEPGP 1133 Query: 1062 RFERTP-GQPGPQRFDGPPGQQVQPRFDG 1089 + + P G PG GPPG +P G Sbjct: 1134 QGPQGPIGPPGEMGPKGPPGAVGEPGLPG 1162 Score = 81.6 bits (200), Expect = 5e-15 Identities = 112/355 (31%), Positives = 137/355 (38%), Gaps = 83/355 (23%) Query: 777 SPRIDGPPTPASLR----------FDGSPGQMGGGGPLRFEGPQGQLGGGCPLRFEGPPG 826 +P + GPP + DG+ G MG G GP G+ G +G PG Sbjct: 662 NPGLPGPPGAKGQKGDPGLSPGKAHDGAKGDMGLPGLSGNPGPPGRKG------HKGYPG 715 Query: 827 PVGTPLRFEGPIGQAGGGGFRFEGSPGLRFEGSPGGLRFEGPGGQPVGGLRFEGHRGQP- 885 P G P G GQ G EGSPG + G PG GP G P G G+ G P Sbjct: 716 PAGHP----GEQGQPGP-----EGSPGAK--GYPGRQGLPGPVGDP-GPKGSRGYIGLPG 763 Query: 886 -VGGLRFEGPHGQP-VGGLRFDNPRGQPVGGLRFEGGHGPSG-----AAIRFDGPHGQPG 938 G +G G P V G R G P G G GP G + GP G PG Sbjct: 764 LFGLPGSDGERGLPGVPGKR--GKMGMP-GFPGVFGERGPPGLDGNPGELGLPGPPGVPG 820 Query: 939 --GGIRFEGPLLQQGVGMRFEGPHGQ-----SVAGLRFEGQHNQLG-----GNLRFEGPH 986 G + GP+ + GP G SV +G + G G+ F+G Sbjct: 821 LIGDLGVLGPI-------GYPGPKGMKGLMGSVGEPGLKGDKGEQGVPGVSGDPGFQGDK 873 Query: 987 GQPGV----GIRFE-GPLVQQG--GGMRFEGPSVPGGGLRIEGPLGQGGPRFEGCHALRF 1039 G G+ G R + GPL + G G + F GP P G GP G GP Sbjct: 874 GSQGLPGFPGARGKPGPLGKVGDKGSIGFPGPPGPEGFPGDIGPPGDNGP---------- 923 Query: 1040 DGQPGQPSLLPRFDGLHGQPGPRFERTP-GQPGPQRFDGPPGQQVQPRFDGVPQR 1093 +G G+P G G PGPR + P G GP G PG + QP G P R Sbjct: 924 EGMKGKP-------GARGLPGPRGQLGPEGDEGPMGPPGAPGLEGQPGRKGFPGR 971 Score = 80.5 bits (197), Expect = 1e-14 Identities = 118/377 (31%), Positives = 141/377 (37%), Gaps = 71/377 (18%) Query: 750 PLFDGPSRPSVARDGPTKMIFEGPNKLSPRIDGPPTPASLRFDGSPGQMGGGGPLRFEGP 809 PL + S+ GP GP I P G PG G GP Sbjct: 890 PLGKVGDKGSIGFPGPP-----GPEGFPGDIGPPGDNGPEGMKGKPGARG------LPGP 938 Query: 810 QGQLGGGCPLRFEGPPGPVGTPLRFEGPIGQAGGGGFRFEGSPGL-RFEGSPGGLRFEGP 868 +GQLG P EGP GP G P G GQ G G F G PGL +G PG GP Sbjct: 939 RGQLG---PEGDEGPMGPPGAP----GLEGQPGRKG--FPGRPGLDGVKGEPGDPGRPGP 989 Query: 869 GGQPVGGLRFEGHRGQP-----VGGLRFEGPHGQPVGGLRFDNPRGQPVGGLRFEGGHGP 923 G+ G + F G G+P G GP G P +P G P GG+ G GP Sbjct: 990 VGEQ-GFMGFIGLVGEPGIVGEKGDRGMMGPPGVPGPKGSMGHP-GMP-GGMGTPGEPGP 1046 Query: 924 SGAAIRFDGPHGQPG--------GGIRFEGPLLQQGVGMRFEGPHG----------QSVA 965 G G G PG G +GP +QG +GP G Q VA Sbjct: 1047 QGP----PGSRGPPGMRGAKGRRGPRGPDGPAGEQG-SRGLKGPPGPQGRPGRPGQQGVA 1101 Query: 966 GLRFEGQHNQLGGNLRFEGPHGQPGVGIRFEGPLVQQGGGMRFEGPSVPGGGLRIEGPLG 1025 G E H G GP G PG L + G +GP P G + +GP G Sbjct: 1102 G---ERGHLGSRGFPGIPGPSGPPGT-----KGLPGEPGPQGPQGPIGPPGEMGPKGPPG 1153 Query: 1026 Q-GGPRFEGCHALRFD----GQPGQPSLL-----PRFDGLHGQPGP-RFERTPGQPGPQR 1074 G P G ++ D G PG+ L+ P +G G GP + G PGP Sbjct: 1154 AVGEPGLPGEAGMKGDLGPLGTPGEQGLIGQRGEPGLEGDSGPMGPDGLKGDRGDPGPDG 1213 Query: 1075 FDGPPGQQVQPRFDGVP 1091 G GQ+ DG P Sbjct: 1214 EHGEKGQEGLMGEDGPP 1230 Score = 79.3 bits (194), Expect = 3e-14 Identities = 134/466 (28%), Positives = 168/466 (36%), Gaps = 116/466 (24%) Query: 721 SDKPFVDSPASRFAGLDTNQRLTA------LAEDRPLFDGPSRPSVARD----------- 763 S KP + S AS+ AG ++ R A D PL D +RPS + Sbjct: 533 SKKP-IGSEASKKAGPKSSPRKPVPLRPGKAARDVPLSDLTTRPSPRQPQPSQQTTPALV 591 Query: 764 -GPTKMIFEGPNKLS--------------PRIDGPPTP-ASLRFDGSPGQMGGGGPLRFE 807 P + + P S P + GPP P G PG G G Sbjct: 592 LAPAQFLSSSPRPTSSGYSIFHLAGSTPFPLLMGPPGPKGDCGLPGPPGLPGLPGIPGAR 651 Query: 808 GPQGQLGGGCPLRFEGPPGPVGTPLRFEGPIGQAGGGGFRFEGSPGLRFEGSPGGLRFEG 867 GP+G G P G PGP G GQ G G SPG +G+ G + G Sbjct: 652 GPRGPPG---PYGNPGLPGPPGAK-------GQKGDPGL----SPGKAHDGAKGDMGLPG 697 Query: 868 PGGQPVGGLRFEGHRGQPVGGLRFEGPHGQPVGGLRFDNPRGQPVGGLRFEGGHGPSGAA 927 G P G +GH+G P G G GQP P G P G + G G Sbjct: 698 LSGNP-GPPGRKGHKGYP-GPAGHPGEQGQP-------GPEGSP-GAKGYPGRQG----- 742 Query: 928 IRFDGPHGQPGGGIRFEGPLLQQGVGMRFEGPHGQSVAGL-RFEGQHNQLGGNLRFEGPH 986 GP G PG +G G+ F P GL G+ ++ G Sbjct: 743 --LPGPVGDPGP----KGSRGYIGLPGLFGLPGSDGERGLPGVPGKRGKM-------GMP 789 Query: 987 GQPGV-GIRFEGPLVQQGGGMRFEG-PSVPG--GGLRIEGPLGQGGPR-------FEGCH 1035 G PGV G R L G + G P VPG G L + GP+G GP+ G Sbjct: 790 GFPGVFGERGPPGLDGNPGELGLPGPPGVPGLIGDLGVLGPIGYPGPKGMKGLMGSVGEP 849 Query: 1036 ALRFD-GQPGQPSL--------------LPRFDGLHGQPGPRFE-------RTPGQPGPQ 1073 L+ D G+ G P + LP F G G+PGP + PG PGP+ Sbjct: 850 GLKGDKGEQGVPGVSGDPGFQGDKGSQGLPGFPGARGKPGPLGKVGDKGSIGFPGPPGPE 909 Query: 1074 RFD---GPPGQQVQPRFDGVP--QRFDGPQHQQASRFDI-PLGLQG 1113 F GPPG G P + GP+ Q D P+G G Sbjct: 910 GFPGDIGPPGDNGPEGMKGKPGARGLPGPRGQLGPEGDEGPMGPPG 955 Score = 76.6 bits (187), Expect = 2e-13 Identities = 123/375 (32%), Positives = 145/375 (38%), Gaps = 84/375 (22%) Query: 772 GPNKLSPRIDGPPTPASLRFDGSPGQMGGGGPLRFEGPQGQLG-GGCPLRFEGPPGPVGT 830 GP R+ P +DG G +G GP GP+G+ G G + EGPPGP G Sbjct: 1291 GPTGAPGRMGAQGEPGLAGYDGHKGIVGPLGP---PGPKGEKGEQGEDGKAEGPPGPPGD 1347 Query: 831 PLRFEGPIGQAGGGGFRFEGSPGLRFEGSPGGLRFE-GPGGQPVGGLRFEGHRGQ----- 884 GP+G G G G PG + GLR + G GQP GH G Sbjct: 1348 ----RGPVGDRGDRG--EPGDPGYPGQEGVQGLRGKPGQQGQP-------GHPGPRGWPG 1394 Query: 885 PVGGLRFEGPHGQP----------VGGLR-FDNPRGQPVGGLRFEGGHGPSGAAIRFDGP 933 P G EGP G+ V GL+ PRG VG EG GP G R DG Sbjct: 1395 PKGSKGAEGPKGKQGKAGAPGRRGVQGLQGLPGPRG-VVGRQGLEGIAGPDGLPGR-DGQ 1452 Query: 934 HGQPG-----GGIRFEGPLLQQGVGMRFEGPHGQSVAGLRFE-GQHNQLG---------- 977 GQ G G GP ++G P Q G + E G QLG Sbjct: 1453 AGQQGEQGDDGDPGPMGPAGKRGNPGVAGLPGAQGPPGFKGESGLPGQLGPPGKRGTEGR 1512 Query: 978 ----GNLRFEGPHGQPGVG--IRFEGPLVQQG-----GGMRFEGPSVPGG--GLR----I 1020 GN G GQPG + F G G G + F+G P G GL I Sbjct: 1513 TGLPGNQGEPGSKGQPGDSGEMGFPGMAGLFGPKGPPGDIGFKGIQGPRGPPGLMGKEGI 1572 Query: 1021 EGPLGQGGPRFEGCHALRFD-GQPGQPSLLPRFDGLHGQPGPRFERTPGQPGPQRFDGPP 1079 GPLG GP G + D G G L G G PGPR G+PGP GPP Sbjct: 1573 VGPLGILGP--SGLPGPKGDKGSRGDWGL----QGPRGPPGPR-----GRPGP---PGPP 1618 Query: 1080 GQQVQPRFDGVPQRF 1094 G +Q + D + F Sbjct: 1619 GGPIQLQQDDLGAAF 1633 Score = 55.8 bits (133), Expect = 3e-07 Identities = 65/197 (32%), Positives = 76/197 (38%), Gaps = 37/197 (18%) Query: 792 DGSPGQMGGGGPLRFEGPQGQLGGGCPLRFEGPPGPVGTPLRFEGPIGQAGGGGFRFE-G 850 DG PG+ G G +G G G P G PG G P +GP G G G + G Sbjct: 1444 DGLPGRDGQAGQQGEQGDDGDPGPMGPAGKRGNPGVAGLP-GAQGPPGFKGESGLPGQLG 1502 Query: 851 SPGLR----FEGSPGGLRFEGPGGQP--VGGLRFEGHRG-----QPVGGLRF---EGPHG 896 PG R G PG G GQP G + F G G P G + F +GP G Sbjct: 1503 PPGKRGTEGRTGLPGNQGEPGSKGQPGDSGEMGFPGMAGLFGPKGPPGDIGFKGIQGPRG 1562 Query: 897 QP--------VGGLRFDNPRGQP--------VGGLRFEGGHGPSGAAIRFDGPHGQPGGG 940 P VG L P G P G +G GP G R GP G PGG Sbjct: 1563 PPGLMGKEGIVGPLGILGPSGLPGPKGDKGSRGDWGLQGPRGPPGPRGR-PGPPGPPGGP 1621 Query: 941 IRFEGPLLQQGVGMRFE 957 I+ L Q +G F+ Sbjct: 1622 IQ----LQQDDLGAAFQ 1634 >gi|4502951 collagen type III alpha 1 preproprotein [Homo sapiens] Length = 1466 Score = 95.5 bits (236), Expect = 4e-19 Identities = 140/484 (28%), Positives = 178/484 (36%), Gaps = 122/484 (25%) Query: 755 PSRPSVARDGPTKMIFEGPNKLSPRID--------------------GPPTPASLRFDGS 794 P P + PT GP SP+ D GPP P G+ Sbjct: 135 PGPPGICESCPT-----GPQNYSPQYDSYDVKSGVAVGGLAGYPGPAGPPGPPGP--PGT 187 Query: 795 PGQMGGGGPLRFEGPQGQLGGGCPLRFEGPPGPVGTPLRFEGPIGQAGGGGFRFEGSPGL 854 G G G ++GP G+ G P GPPG +G GP G+ G G G PG Sbjct: 188 SGHPGSPGSPGYQGPPGEPGQAGPSGPPGPPGAIGP----SGPAGKDGESG--RPGRPGE 241 Query: 855 RFEGSPGGLRFEGPGGQPVGGLRFEGHRGQPVGGLRFEGPHGQP----VGGLRFDN---- 906 R G PG +GP G P G +GHRG F+G +G+ GL+ +N Sbjct: 242 R--GLPGPPGIKGPAGIP-GFPGMKGHRG-------FDGRNGEKGETGAPGLKGENGLPG 291 Query: 907 ---------PRGQP----VGGLRFEGGHGPSGAAIRFDGPHGQPG--GGIRFEGPLLQQG 951 PRG P GL G + A DG G PG G F G +G Sbjct: 292 ENGAPGPMGPRGAPGERGRPGLPGAAGARGNDGARGSDGQPGPPGPPGTAGFPGSPGAKG 351 Query: 952 VGMRFEGPHGQSVAGLRFEGQHNQLG--GNLRFEGPHGQPGVGIRFEGPLVQQGGGMRFE 1009 GP G S GQ + G G+ +GP G PG+ GG Sbjct: 352 E----VGPAG-SPGSNGAPGQRGEPGPQGHAGAQGPPGPPGIN--------GSPGGKGEM 398 Query: 1010 GPS-VPG--GGLRIEGPLGQGGPRFEGCHALRFD-GQPGQPSLLPRFDGLHGQPGPRFER 1065 GP+ +PG G + GP G G G LR G+PG+ +G G+PGPR ER Sbjct: 399 GPAGIPGAPGLMGARGPPGPAGA--NGAPGLRGGAGEPGK-------NGAKGEPGPRGER 449 Query: 1066 ----TPGQPGPQRFDGPPGQQVQPRFDGVPQRFDGPQHQQASRFDIPLGLQGTRFDNHPS 1121 PG PG + DG G +P +G+P + A F P G G P Sbjct: 450 GEAGIPGVPGAKGEDGKDGSPGEPGANGLP---GAAGERGAPGFRGPAGPNGI-----PG 501 Query: 1122 QRLESVSFNQTGPYNDPPGNAFNAPSQGLQFQRHEQIFDSPQGPNFNG----PHGPGNQS 1177 ++ + GP P G A G+ P GP G P GPG+ Sbjct: 502 EKGPAGERGAPGPAG-PRGAAGEPGRDGV-----------PGGPGMRGMPGSPGGPGSDG 549 Query: 1178 FSNP 1181 P Sbjct: 550 KPGP 553 Score = 94.7 bits (234), Expect = 6e-19 Identities = 143/450 (31%), Positives = 164/450 (36%), Gaps = 112/450 (24%) Query: 754 GPSRPSVARDGPTKMIFEGPNKLSPRIDGPPTPASLRFDGSPGQMGG-GGPLRFEGPQGQ 812 GP PS R P M F GP DG P G G+ GG GGP GPQG Sbjct: 564 GPPGPSGPRGQPGVMGFPGPKGN----DGAP--------GKNGERGGPGGP----GPQGP 607 Query: 813 LGGGCPLRFEGPPGPVGT--------PLRFEGPIGQAGGGGFRFE----GSPGLRFE-GS 859 G +GPPGP G P +G G G GG E G PG + + G+ Sbjct: 608 PGKNGETGPQGPPGPTGPGGDKGDTGPPGPQGLQGLPGTGGPPGENGKPGEPGPKGDAGA 667 Query: 860 PGGLRFEGPGGQPVGGLRFEGHRGQPVGGLRFEGPHGQPVGGLRFDNPRGQPVGGLRFEG 919 PG +G G P G RG P G G P GLR P GG G Sbjct: 668 PGAPGGKGDAGAP-------GERGPP-------GLAGAP--GLRGGAGPPGPEGGKGAAG 711 Query: 920 GHGPSGAAIRFDGPHGQPG--GGIRFEGPLLQQGVGMRFEGPHGQSVAGLRFEGQHNQLG 977 GP GAA G G PG GG+ GP +G GP V G Sbjct: 712 PPGPPGAA-GTPGLQGMPGERGGLGSPGPKGDKG---EPGGPGADGVPGK---------- 757 Query: 978 GNLRFEGPHGQPGVGIRFEGPLVQQGGGMRFEGPSVPGGGLRIEGPLGQGGPRFEGCHAL 1037 +GP G G I GP Q G P +PG I GP G G R E Sbjct: 758 -----DGPRGPTG-PIGPPGPAGQPGDKGEGGAPGLPG----IAGPRGSPGERGE----- 802 Query: 1038 RFDGQPGQPSLLPRFDGLHGQPGPRFERTPGQPGPQRFDGPPGQQVQPRFDGVPQRFDGP 1097 G PG P+ P G +G+PG + ER G PG + GPPG P G P GP Sbjct: 803 --TGPPG-PAGFPGAPGQNGEPGGKGER--GAPGEKGEGGPPGVAGPPGGSG-PAGPPGP 856 Query: 1098 QHQQASR----------FDIPLGLQGTRFDN-HPSQRLESVSFNQTGPYNDPPGNAFNAP 1146 Q + R F GL G N +P S S + G PPG A N Sbjct: 857 QGVKGERGSPGGPGAAGFPGARGLPGPPGSNGNPGPPGPSGSPGKDG----PPGPAGNT- 911 Query: 1147 SQGLQFQRHEQIFDSPQGPNFNGPHGPGNQ 1176 +P P +GP G Q Sbjct: 912 -------------GAPGSPGVSGPKGDAGQ 928 Score = 92.8 bits (229), Expect = 2e-18 Identities = 132/422 (31%), Positives = 156/422 (36%), Gaps = 73/422 (17%) Query: 778 PRIDGPPTPASLRFDGSPGQMGGGGPLRFEGPQGQLGGGCPLRFEGPPGPVGTPLRFEGP 837 P DG P P GS G+ G GP GP+GQ G + F GP G G P G Sbjct: 545 PGSDGKPGPP-----GSQGESGRPGPPGPSGPRGQPG---VMGFPGPKGNDGAP----GK 592 Query: 838 IGQAGG-GGFRFEGSPGLRFEGSPGGLRF-EGPGGQ--PVGGLRFEGHRGQPVGGLRFEG 893 G+ GG GG +G PG E P G GPGG G +G +G P G G Sbjct: 593 NGERGGPGGPGPQGPPGKNGETGPQGPPGPTGPGGDKGDTGPPGPQGLQGLPGTG----G 648 Query: 894 PHGQPVGGLRFDNPRGQPVGGLRFEGGHGPSGAAIRFDGPHGQPG--------GGIRFEG 945 P G+ G P+G G GG G +GA G G PG GG G Sbjct: 649 PPGEN-GKPGEPGPKGD-AGAPGAPGGKGDAGA----PGERGPPGLAGAPGLRGGAGPPG 702 Query: 946 PLLQQGVGMRFEGPHGQSVAGLRFEGQHNQLGGNLRFEGPHGQPGVGIRFEGPLVQQGGG 1005 P +G P GL +G + GG L GP G G GP G Sbjct: 703 PEGGKGAAGPPGPPGAAGTPGL--QGMPGERGG-LGSPGPKGDKG---EPGGPGADGVPG 756 Query: 1006 MRFEGPSVPGGGLRIEGPLGQGGPRFEGCHALRFDGQPGQPSLLPRFDGLHGQPGPRFER 1065 +GP P G + GP GQ G + EG G PG LP G G PG R E Sbjct: 757 K--DGPRGPTGPIGPPGPAGQPGDKGEG-------GAPG----LPGIAGPRGSPGERGE- 802 Query: 1066 TPGQPGPQRFDGPPGQQVQP-----------RFDGVPQRFDGPQHQQASRFDIPLGLQGT 1114 G PGP F G PGQ +P + +G P GP P G QG Sbjct: 803 -TGPPGPAGFPGAPGQNGEPGGKGERGAPGEKGEGGPPGVAGPPGGSGPAG--PPGPQGV 859 Query: 1115 RFDNHPSQRLESVSFNQTGPYNDPPGNAFNAPSQGLQFQRHEQIFDSPQGP--NFNGPHG 1172 + + + F PPG+ N G + D P GP N P Sbjct: 860 KGERGSPGGPGAAGFPGARGLPGPPGSNGNPGPPGPSGSPGK---DGPPGPAGNTGAPGS 916 Query: 1173 PG 1174 PG Sbjct: 917 PG 918 Score = 90.5 bits (223), Expect = 1e-17 Identities = 109/324 (33%), Positives = 125/324 (38%), Gaps = 71/324 (21%) Query: 782 GPPTPASLRFDGSPGQMGGGGPLRFEGPQGQLGGGCPLRFEGPPGPVGTPLRFEGPIGQA 841 GPP PA G PG G GG G G G GPPGP G P G G+ Sbjct: 768 GPPGPA-----GQPGDKGEGGAPGLPGIAGPRGSPGERGETGPPGPAGFP-GAPGQNGEP 821 Query: 842 GGGGFRFEGSPGLRFEGSPGGLRF----EGPGGQPVGGLRFEGHRGQP--VGGLRFEGPH 895 GG G R G+PG + EG P G+ GP G P G +G RG P G F G Sbjct: 822 GGKGER--GAPGEKGEGGPPGVAGPPGGSGPAGPP-GPQGVKGERGSPGGPGAAGFPGAR 878 Query: 896 GQPVGGLRFDNPRGQPVGGLRFEGGHGPSGAAIRFDGPHGQPGGGIRFEGPLLQQGVGMR 955 G P P G G GPSG+ + DGP G P G G GV Sbjct: 879 GLP-----------GPPGSNGNPGPPGPSGSPGK-DGPPG-PAGNTGAPG---SPGVS-- 920 Query: 956 FEGPHGQSVAGLRFEGQHNQLGGNLRFEGPHGQPGVGIRFEGPLVQQG--GGMRFEGPSV 1013 GP G + GQ + G G G PG GPL G G GP Sbjct: 921 --GPKGDA-------GQPGEKGS----PGAQGPPGA----PGPLGIAGITGARGLAGP-- 961 Query: 1014 PGGGLRIEGPLGQGGPRFEGCHALRFDGQPGQPSLLPRFDGLHGQPGPRFERTPGQPGPQ 1073 PG + GP G GP+ + G+PG L G G PGP+ G PG Sbjct: 962 PG----MPGPRGSPGPQGVKGES----GKPGANGL----SGERGPPGPQ-----GLPGLA 1004 Query: 1074 RFDGPPGQQVQPRFDGVPQRFDGP 1097 G PG+ P DG+P R P Sbjct: 1005 GTAGEPGRDGNPGSDGLPGRDGSP 1028 Score = 86.3 bits (212), Expect = 2e-16 Identities = 138/468 (29%), Positives = 162/468 (34%), Gaps = 98/468 (20%) Query: 754 GPSRPSVARDGPTKMIF-EGPNKLSPRIDGPPTPASLRFDGSPGQMGGGGPLRFEGPQGQ 812 GPS P GP I GP P P G PG G G F G +G Sbjct: 210 GPSGPP----GPPGAIGPSGPAGKDGESGRPGRPGERGLPGPPGIKGPAGIPGFPGMKGH 265 Query: 813 LG-----------GGCPLRFE----------GPPGPVGTPLR-----FEGPIGQAGGGGF 846 G G L+ E GP GP G P G G G G Sbjct: 266 RGFDGRNGEKGETGAPGLKGENGLPGENGAPGPMGPRGAPGERGRPGLPGAAGARGNDGA 325 Query: 847 R-FEGSPG-------LRFEGSPGGLRFEGPGGQPVGGLRFEGHRGQ--PVGGLRFEGPHG 896 R +G PG F GSPG GP G P G G RG+ P G +GP G Sbjct: 326 RGSDGQPGPPGPPGTAGFPGSPGAKGEVGPAGSP-GSNGAPGQRGEPGPQGHAGAQGPPG 384 Query: 897 QP-----VGGLRFDNPRGQPVGGLRFEGGHGPSGAAIRFDGPHGQPG--GGIRFEGPLLQ 949 P GG P G P G G GP G A G +G PG GG G Sbjct: 385 PPGINGSPGGKGEMGPAGIP-GAPGLMGARGPPGPA----GANGAPGLRGGAGEPGKNGA 439 Query: 950 QGVGMRFEGPHGQSVAGLRFEGQHNQLGGNLRFEGPHGQPG-VGIRFEGPLVQQGGGMRF 1008 +G GP G+ R E + G +G G PG G + G F Sbjct: 440 KGE----PGPRGE-----RGEAGIPGVPGAKGEDGKDGSPGEPGANGLPGAAGERGAPGF 490 Query: 1009 EGPSVPGGGLRIEGPLGQ-GGPRFEGCHALRFDGQPGQPSLLPRFDGLHGQPGPRFERTP 1067 GP+ P G +GP G+ G P G G+PG+ +P G+ G PG +P Sbjct: 491 RGPAGPNGIPGEKGPAGERGAPGPAGPRGAA--GEPGRDG-VPGGPGMRGMPG-----SP 542 Query: 1068 GQPGPQRFDGPPGQQVQPRFDGVPQRFDGPQHQQASRFDIPLGLQGTR-FDNHPSQRLES 1126 G PG GPPG Q + G P GP+ Q +G G + D P + E Sbjct: 543 GGPGSDGKPGPPGSQGESGRPGPPGP-SGPRGQPG-----VMGFPGPKGNDGAPGKNGER 596 Query: 1127 VSFNQTGPYNDPPGNAFNAPSQGLQFQRHEQIFDSPQGPNFNGPHGPG 1174 GP P N PQGP GP GPG Sbjct: 597 GGPGGPGPQGPPGKNGET----------------GPQGP--PGPTGPG 626 Score = 85.5 bits (210), Expect = 4e-16 Identities = 113/359 (31%), Positives = 126/359 (35%), Gaps = 100/359 (27%) Query: 753 DGPSRPSVARDGPTKMIFEGPN--------KLSPRIDGPP-TPASLRFDGSPGQMGGGGP 803 DGP P+ P GP K SP GPP P L G G G GP Sbjct: 902 DGPPGPAGNTGAPGSPGVSGPKGDAGQPGEKGSPGAQGPPGAPGPLGIAGITGARGLAGP 961 Query: 804 LRFEGPQGQLG-----------GGCPLRFE-GPPGPVGTPLRFEGPIGQAG-GGGFRFEG 850 GP+G G G L E GPPGP G P G G+ G G +G Sbjct: 962 PGMPGPRGSPGPQGVKGESGKPGANGLSGERGPPGPQGLP-GLAGTAGEPGRDGNPGSDG 1020 Query: 851 SPGLRFEGSPGGLRFEGPGGQPVGGLRFEGHRGQPVGGLRFEGPHGQPVGGLRFDNPRGQ 910 PG +GSPGG G G P G GH G P Sbjct: 1021 LPGR--DGSPGGKGDRGENGSP-GAPGAPGHPGPP------------------------G 1053 Query: 911 PVGGLRFEGGHGPSGAAIRFDGPHGQPG--GGIRFEGPLLQQGVGMRFEGPHGQSVAGLR 968 PVG G G SG A GP G PG G GP +GP G G Sbjct: 1054 PVGPAGKSGDRGESGPA----GPAGAPGPAGSRGAPGP----------QGPRGDK--GET 1097 Query: 969 FEGQHNQLGGNLRFEGPHGQPGVGIRFEGPLVQQGGGMRFEGPSVPGGGLRIEGPLGQGG 1028 E + G+ F G G PG GP QQ G + GP+ P GP+G G Sbjct: 1098 GERGAAGIKGHRGFPGNPGAPG----SPGPAGQQ-GAIGSPGPAGP------RGPVGPSG 1146 Query: 1029 PRFEGCHALRFDGQPGQPSLLPRFDGLHGQPGPRFER-------TPGQPGPQRFDGPPG 1080 P + DG G P G G PGPR R +PG PG GPPG Sbjct: 1147 PPGK-------DGTSGHP-------GPIGPPGPRGNRGERGSEGSPGHPGQPGPPGPPG 1191 Score = 82.8 bits (203), Expect = 2e-15 Identities = 134/439 (30%), Positives = 160/439 (36%), Gaps = 88/439 (20%) Query: 782 GPPTPASLRFDGSPG---QMGGGGPLRFEGPQGQLGGGCPLRFEGPPGPVGT--PLRFEG 836 GPP P + +GSPG +M GP G G +G GPPGP G G Sbjct: 381 GPPGPPGI--NGSPGGKGEM---GPAGIPGAPGLMGA------RGPPGPAGANGAPGLRG 429 Query: 837 PIGQAGGGGFRFEGSPGLRFE-------GSPGGLRFEGPGGQP----VGGL-RFEGHRGQ 884 G+ G G + G PG R E G PG +G G P GL G RG Sbjct: 430 GAGEPGKNGAK--GEPGPRGERGEAGIPGVPGAKGEDGKDGSPGEPGANGLPGAAGERGA 487 Query: 885 PVGGLRFEGPHGQPVGGLRFDNPRGQPVGGLRFEGGHGPSGAAIRFDGPHGQPGG-GIRF 943 P F GP G P G +G P G G GP GAA G G PGG G+R Sbjct: 488 P----GFRGPAG-PNG---IPGEKG-PAGERGAPGPAGPRGAAGE-PGRDGVPGGPGMR- 536 Query: 944 EGPLLQQGVGMRFEGPHGQSVAGLRFEGQHNQLGGNLRFEGPHGQPGVGIRFEGPLVQQG 1003 G+ GP G + G GP GQPGV + F GP G Sbjct: 537 -------GMPGSPGGPGSDGKPGPPGSQGESGRPGPPGPSGPRGQPGV-MGFPGPKGNDG 588 Query: 1004 --------GGMRFEGPSVPGGGLRIEGPLGQGGPRFEGCHALRFDGQPGQPSLL------ 1049 GG GP P G GP G GP G G PG L Sbjct: 589 APGKNGERGGPGGPGPQGPPGKNGETGPQGPPGPTGPGGDK-GDTGPPGPQGLQGLPGTG 647 Query: 1050 --PRFDGLHGQPGPRFER-TPGQPGPQRFDGPPGQQVQPRFDGVP--QRFDGPQHQQASR 1104 P +G G+PGP+ + PG PG + G PG++ P G P + GP + + Sbjct: 648 GPPGENGKPGEPGPKGDAGAPGAPGGKGDAGAPGERGPPGLAGAPGLRGGAGPPGPEGGK 707 Query: 1105 FDI----PLGLQGT-RFDNHPSQRLESVSFNQTGPYNDPPG-NAFNAPSQGLQFQRHEQI 1158 P G GT P +R S G +P G A P + Sbjct: 708 GAAGPPGPPGAAGTPGLQGMPGERGGLGSPGPKGDKGEPGGPGADGVPGK---------- 757 Query: 1159 FDSPQGPNFN-GPHGPGNQ 1176 D P+GP GP GP Q Sbjct: 758 -DGPRGPTGPIGPPGPAGQ 775 Score = 71.2 bits (173), Expect = 7e-12 Identities = 98/331 (29%), Positives = 125/331 (37%), Gaps = 71/331 (21%) Query: 795 PGQMGGGGPLRFEGPQGQLGGGCPLRFEGPPGPVGTPLRFEGPIG-----QAGGGGF--- 846 P G GP GP G G G PG G+P GP G G + Sbjct: 99 PNGQGPQGPKGDPGPPGIPGRNGDPGIPGQPGSPGSP----GPPGICESCPTGPQNYSPQ 154 Query: 847 --RFEGSPGLRFEGSPGGLRFEGPGGQ--PVGGLRFEGHRGQPVGGLRFEGPHGQPVGGL 902 ++ G+ G G + GP G P G GH G P G ++GP G+P G Sbjct: 155 YDSYDVKSGVAVGGLAG---YPGPAGPPGPPGPPGTSGHPGSP-GSPGYQGPPGEP-GQA 209 Query: 903 RFDNPRGQPVGGLRFEGGHGPSGAAIRFDGPHGQPG--GGIRFEGPLLQQGVGMRFEGPH 960 P G P G GPSG A + DG G+PG G GP G+ +GP Sbjct: 210 GPSGPPGPP-------GAIGPSGPAGK-DGESGRPGRPGERGLPGP---PGI----KGPA 254 Query: 961 G-QSVAGLR----FEGQHNQLG--GNLRFEGPHGQPGVGIRFEGPLVQQGGGMRFEGPSV 1013 G G++ F+G++ + G G +G +G PG GP+ +G P + Sbjct: 255 GIPGFPGMKGHRGFDGRNGEKGETGAPGLKGENGLPGEN-GAPGPMGPRGAPGERGRPGL 313 Query: 1014 PGGGLRIEGPLGQGGPRFEGCHALRFDGQPGQPSLLPRFDGLHGQPGPRFERTP------ 1067 PG G G G R DGQPG P P G G PG + E P Sbjct: 314 PGAA----GARGNDGARGS-------DGQPGPPG-PPGTAGFPGSPGAKGEVGPAGSPGS 361 Query: 1068 -------GQPGPQRFDGPPGQQVQPRFDGVP 1091 G+PGPQ G G P +G P Sbjct: 362 NGAPGQRGEPGPQGHAGAQGPPGPPGINGSP 392 Score = 35.8 bits (81), Expect = 0.33 Identities = 47/172 (27%), Positives = 59/172 (34%), Gaps = 53/172 (30%) Query: 1011 PSVPGGGLRIEGPLGQGGPRFEGCHALRFDGQPGQPSLLPRFDGLHGQPGPRFERTPGQP 1070 P+ P G +GP G GP PG P G +G PG PGQP Sbjct: 95 PTRPPNGQGPQGPKGDPGP-------------PGIP-------GRNGDPG-----IPGQP 129 Query: 1071 GPQRFDGPPGQQVQPRFDGVPQRFDGPQHQQASRFDIPLGLQGTRFDNHPSQRLESVSFN 1130 G GPPG + PQ + PQ+ +D+ G+ +P Sbjct: 130 GSPGSPGPPG--ICESCPTGPQNY-SPQYDS---YDVKSGVAVGGLAGYP---------G 174 Query: 1131 QTGPYNDPPGNAFNAPSQGLQFQRHEQIFDSPQGPNFNGPHG-PGNQSFSNP 1181 GP PPG + G SP P + GP G PG S P Sbjct: 175 PAGP-PGPPGPPGTSGHPG-----------SPGSPGYQGPPGEPGQAGPSGP 214 Score = 35.4 bits (80), Expect = 0.43 Identities = 34/120 (28%), Positives = 43/120 (35%), Gaps = 3/120 (2%) Query: 737 DTNQRLTALAEDRPLFDG-PSRPSVARDGPTKMIFEGPNKLSPRIDGPPT--PASLRFDG 793 +T +R A + F G P P + P PR P+ P G Sbjct: 1096 ETGERGAAGIKGHRGFPGNPGAPGSPGPAGQQGAIGSPGPAGPRGPVGPSGPPGKDGTSG 1155 Query: 794 SPGQMGGGGPLRFEGPQGQLGGGCPLRFEGPPGPVGTPLRFEGPIGQAGGGGFRFEGSPG 853 PG +G GP G +G G GPPGP G P G +G A G E + G Sbjct: 1156 HPGPIGPPGPRGNRGERGSEGSPGHPGQPGPPGPPGAPGPCCGGVGAAAIAGIGGEKAGG 1215 >gi|239754955 PREDICTED: similar to COL22A1 protein [Homo sapiens] Length = 1073 Score = 95.1 bits (235), Expect = 5e-19 Identities = 114/340 (33%), Positives = 139/340 (40%), Gaps = 65/340 (19%) Query: 792 DGSPGQMGGGGPLRFEGPQGQLGGGCPLRFEGPPGPVGTPLRFEGPIGQAGGGGFRFE-G 850 +G PG+ G GP +GPQG G P G PG G P GP G G G + E G Sbjct: 749 EGLPGKDGDTGPTGPQGPQGPRG---PPGKNGSPGSPGEP----GPSGTPGQKGSKGENG 801 Query: 851 SPGLRFEGSPGGLRFEGPGGQP--VGGLRFEGHRGQPVGGLRFEGPHGQPVGGLRFDNP- 907 SPGL PG L GP G+P G EG G+P G F+G G P G++ D Sbjct: 802 SPGL-----PGFLGPRGPPGEPGEKGVPGKEGVPGKP-GEPGFKGERGDP--GIKGDKGP 853 Query: 908 ---RGQPVGGLRFEGGHGPSGAAIRFDGPHGQPG--GGIRFEGPLLQQGV-GMRFEGPHG 961 +GQP G G G +G GP G PG G + GP Q G G+R E P Sbjct: 854 PGGKGQP-GDPGIPGHKGHTGLM----GPQGLPGENGPVGPPGPPGQPGFPGLRGESPSM 908 Query: 962 QSVAGLRFEGQHNQLGGNLRF----------------EGPHGQPGVGIRFEGPLVQQGGG 1005 +++ L E QL L + GP G PG + L + G Sbjct: 909 ETLRRLIQEELGKQLETRLAYLLAQMPPAYMKSSQGRPGPPGPPG-----KDGLPGRAGP 963 Query: 1006 MRFEGPSVPGGGLRIEGPLGQGGPRFEGCHALRFDGQPGQPSL-------LPRFDGLHGQ 1058 M G GG +EGP G GP+ E G PG P + P G G+ Sbjct: 964 MGEPGRPGQGG---LEGPSGPIGPKGER----GAKGDPGAPGVGLRGEMGPPGIPGQPGE 1016 Query: 1059 PGPRFERTPGQPGPQRFDGPPGQQVQPRFDGVPQRFDGPQ 1098 PG + PG PGPQ GP G P G P + D Q Sbjct: 1017 PGYAKDGLPGIPGPQGETGPAGHPGLPGPPGPPGQCDPSQ 1056 Score = 89.0 bits (219), Expect = 3e-17 Identities = 113/336 (33%), Positives = 138/336 (41%), Gaps = 63/336 (18%) Query: 793 GSPGQMGGGGPLRF---EGPQGQLGGGCPLRFEGPPGPVGTPLR--------FEGPIGQA 841 G+PG G G + EG G+ G P +GP GP G P + GP G Sbjct: 732 GAPGPRGESGAMGLPGQEGLPGKDGDTGPTGPQGPQGPRGPPGKNGSPGSPGEPGPSGTP 791 Query: 842 GGGGFRFE-GSPGLRFEGSPGGLRFEGPGGQP--VGGLRFEGHRGQPVGGLRFEGPHGQP 898 G G + E GSPGL PG L GP G+P G EG G+P G F+G G P Sbjct: 792 GQKGSKGENGSPGL-----PGFLGPRGPPGEPGEKGVPGKEGVPGKP-GEPGFKGERGDP 845 Query: 899 VGGLRFD----NPRGQPVGGLRFEGGHGPSGAAIRFDGPHGQPG--GGIRFEGPLLQQGV 952 G++ D +GQP G G G +G GP G PG G + GP Q G Sbjct: 846 --GIKGDKGPPGGKGQP-GDPGIPGHKGHTGLM----GPQGLPGENGPVGPPGPPGQPGF 898 Query: 953 -GMRFEGPHGQSVAGLRFEGQHNQLGGNLRF-------------------EGPHGQPGVG 992 G+R E P +++ L E QL L + GP G+ G+ Sbjct: 899 PGLRGESPSMETLRRLIQEELGKQLETRLAYLLAQMPPAYMKSSQGRPGPPGPPGKDGLP 958 Query: 993 IRFEGPLVQQG--GGMRFEGPSVPGGGLRIEGPLGQGGPRFEGCHALR----FDGQPGQP 1046 R GP+ + G G EGPS P G G G G G GQPG+P Sbjct: 959 GR-AGPMGEPGRPGQGGLEGPSGPIGPKGERGAKGDPGAPGVGLRGEMGPPGIPGQPGEP 1017 Query: 1047 SLLPRFDGLHGQPGPRFERTP-GQPGPQRFDGPPGQ 1081 DGL G PGP+ E P G PG GPPGQ Sbjct: 1018 GYAK--DGLPGIPGPQGETGPAGHPGLPGPPGPPGQ 1051 Score = 84.7 bits (208), Expect = 6e-16 Identities = 125/426 (29%), Positives = 161/426 (37%), Gaps = 74/426 (17%) Query: 783 PPTPASLRFDGSPGQMGGGGPLRFEGPQGQLGG----------GCPLRF-----EGPPGP 827 P P G PG++G GP G +GQ G G P GPPG Sbjct: 358 PGLPGEPGLQGRPGELGPQGPTGPPGAKGQEGAHGAPGAAGNPGAPGHVGAPGPSGPPGS 417 Query: 828 VGTP-LRF----EGPIGQAGGGGFRFEGSPG-LRFEGSPGGLRFEGPGGQPVGGLRFEGH 881 VG P LR +G G+ G G EGSPG + G PG GP G+ G G Sbjct: 418 VGAPGLRGTPGKDGERGEKGAAGE--EGSPGPVGPRGDPGAPGLPGPPGKGKDGE--PGL 473 Query: 882 RGQP--VGGLRFEGPHGQPVGGLRFDNPRGQPVGGLRFEGGHGPSGAAIRFDGPHGQPG- 938 RG P G L +G G P G RG P G+ G GPSG G G PG Sbjct: 474 RGSPGLPGPLGTKGDRGAP-GIPGSPGSRGDP--GIGVAGPPGPSGPP----GDKGSPGS 526 Query: 939 -GGIRFEGPLLQQGVGMRFEGPHGQS-VAGLRFEGQHNQLGGNLRFEGPHGQPGV----G 992 G F GP +GP G+ ++ L G N L ++ + P G PG+ G Sbjct: 527 RGLPGFPGP----------QGPAGRDGLSSLLSPGDINLLAKDVCNDCPPGPPGLPGLPG 576 Query: 993 IRFEGPLVQQGGGMRFEGPSVPGGGLRIEGPLGQGGPRFEGCHALRFDGQPGQPSLLPRF 1052 + + + + G EG G + GP G GP+ G G+ Sbjct: 577 FKGDKGVPGKPGREGTEGKKGEAGPPGLPGPPGIAGPQ----------GSQGERGA---- 622 Query: 1053 DGLHGQPGPRFERTPGQPGPQRFDGPPGQQVQPRFDGVPQRFDGPQHQQASRFDIPLGLQ 1112 DG GQ G + G PG F GPPG P DG+ P Q + + P G Q Sbjct: 623 DGEVGQKGDQ-----GHPGVPGFMGPPGNPGPPGADGIAGAAGPPGIQGSPGKEGPPGPQ 677 Query: 1113 G-TRFDNHPSQRLESVSFNQTGPYNDPPGNAFNAPSQGLQFQRHEQIFDSPQGPNFNGPH 1171 G + P + + + GP + PG A G + R F G +G Sbjct: 678 GPSGLPGIPGEEGKEGRDGKPGPPGE-PGKAGEPGLPGPEGARGPPGFKGHTGD--SGAP 734 Query: 1172 GPGNQS 1177 GP +S Sbjct: 735 GPRGES 740 Score = 83.2 bits (204), Expect = 2e-15 Identities = 131/434 (30%), Positives = 159/434 (36%), Gaps = 84/434 (19%) Query: 750 PLFDGPSRPSVARDGPTKMIFEGP-NKLSPRI--DGPPTPASLR-FDGSPGQMGGGGPLR 805 P F GP P+ RDG + ++ G N L+ + D PP P L G G G G Sbjct: 530 PGFPGPQGPA-GRDGLSSLLSPGDINLLAKDVCNDCPPGPPGLPGLPGFKGDKGVPGKPG 588 Query: 806 FEGPQGQLGGGCPLRFEGPPGPVGTPLRFEGPIGQAGGGGFRFEGSPGLRFEGSPGGLRF 865 EG +G+ G P GPPG G +G G+ G G G G +G PG F Sbjct: 589 REGTEGKKGEAGPPGLPGPPGIAGP----QGSQGERGADGE--VGQKG--DQGHPGVPGF 640 Query: 866 EGPGGQP--VGGLRFEGHRGQP--VGGLRFEGPHGQPVGGLRFDNPRGQPVGGLRFEGGH 921 GP G P G G G P G EGP G P G P G P G EG Sbjct: 641 MGPPGNPGPPGADGIAGAAGPPGIQGSPGKEGPPG-PQG------PSGLP-GIPGEEGKE 692 Query: 922 GPSGAAIRFDGPHGQPGGGIRFEGPLLQQGVGMRFEGPHGQSVAGLRFEGQHNQLGGNLR 981 G G GP G+PG + P L G R GP G F+G G Sbjct: 693 GRDGKP----GPPGEPG---KAGEPGLPGPEGAR--GPPG-------FKGHTGDSGA--- 733 Query: 982 FEGPHGQPG-VGIRFEGPLVQQGGGMRFEGPSVPGGGLRIEGPLGQGGPRFEGCHALRFD 1040 GP G+ G +G+ + L + G GP+ P G GP G+ G Sbjct: 734 -PGPRGESGAMGLPGQEGLPGKDGDT---GPTGPQGPQGPRGPPGKNGS----------P 779 Query: 1041 GQPGQPSLLPRFDGLHGQPGPRFERTPGQPGPQRFDGPPGQQVQPRFDGVPQRFDGPQHQ 1100 G PG+P G GQ G + E G PG F GP G +P GVP + P Sbjct: 780 GSPGEPGP----SGTPGQKGSKGEN--GSPGLPGFLGPRGPPGEPGEKGVPGKEGVPGKP 833 Query: 1101 QASRFDIPLGLQGTRFDNHPSQRLESVSFNQTGPYNDPPGNAFNAPSQGLQFQRHEQIFD 1160 F G G + D PPG G+ + Sbjct: 834 GEPGFKGERGDPGIKGD------------------KGPPGGKGQPGDPGIPGHKGHTGLM 875 Query: 1161 SPQG-PNFNGPHGP 1173 PQG P NGP GP Sbjct: 876 GPQGLPGENGPVGP 889 Score = 73.2 bits (178), Expect = 2e-12 Identities = 96/327 (29%), Positives = 113/327 (34%), Gaps = 89/327 (27%) Query: 783 PPTPASLRFDGSPGQMGGGGPLRFEGPQGQLGGGCPLRFEGPPGPVGTPLRF-------- 834 P P G G G G L G +G G GPPG GT F Sbjct: 288 PGAPGFPGVRGEKGDQGEKGELGLPGLKGDRGEKGEAGPAGPPGLPGTTSLFTPHPRMPG 347 Query: 835 -EGPIGQAGGGGFRFEGSPGLRFEGSPGGLRFEGPGGQPVGGLRFEGHRGQPVGGLRFEG 893 +GP G+ G G G PGL +G PG L +GP G P G +GQ EG Sbjct: 348 EQGPKGEKGDPGL--PGEPGL--QGRPGELGPQGPTGPP-------GAKGQ-------EG 389 Query: 894 PHGQPVGGLRFDNPRGQPVGGLRFEGGHGPSG--AAIRFDGPHGQPGGGIRFEGPLLQQG 951 HG P G P G G GPSG ++ G G PG Sbjct: 390 AHGAP-------GAAGNP-GAPGHVGAPGPSGPPGSVGAPGLRGTPGK------------ 429 Query: 952 VGMRFEGPHGQSVAGLRFEGQHNQLGGNLRFEGPHGQPGVGIRFEGPLVQQGGGMRFEGP 1011 +G G+ A G+ G GP G PG P + G +G Sbjct: 430 -----DGERGEKGAA----GEEGSPGP----VGPRGDPGA------PGLPGPPGKGKDGE 470 Query: 1012 SVPGGGLRIEGPLGQGGPRFEGCHALRFDGQPGQPSLLPRFDGLHGQPGPRFERTPGQPG 1071 G + GPLG G R G PG P G PG R + G G Sbjct: 471 PGLRGSPGLPGPLGTKGDR----------GAPGIP----------GSPGSRGDPGIGVAG 510 Query: 1072 PQRFDGPPGQQVQPRFDGVPQRFDGPQ 1098 P GPPG + P G+P F GPQ Sbjct: 511 PPGPSGPPGDKGSPGSRGLP-GFPGPQ 536 >gi|116256356 alpha 4 type IV collagen precursor [Homo sapiens] Length = 1690 Score = 94.4 bits (233), Expect = 8e-19 Identities = 138/461 (29%), Positives = 170/461 (36%), Gaps = 88/461 (19%) Query: 752 FDGPSRPSVARDGPTKMIFEGPNKLSPRIDGPPTPASLRFDGSPGQMGGGGPLRFEGPQG 811 F GP P + GP GP P + P P G PG G GP +G +G Sbjct: 614 FPGPLGPP-GKAGPV-----GP----PGLGFPGPPGERGHPGVPGHPGVRGPDGLKGQKG 663 Query: 812 QL--------GGGCPLRFEGPPGPVGTPLRFEGPIGQAG-GGGFRFEGSPGLRFEGSPGG 862 G P F+GPPGP G F GP G G G +G P G+PG Sbjct: 664 DTISCNVTYPGRHGPPGFDGPPGPKG----FPGPQGAPGLSGSDGHKGRP-----GTPGT 714 Query: 863 LRFEGPGG--QPVGGLRFEGHRG-QPVGGLRFEGPHGQPVGGLRFDNPRGQPVGGLRFEG 919 GP G +G F G +G PVG GP G P + P G L G Sbjct: 715 AEIPGPPGFRGDMGDPGFGGEKGSSPVGP---PGPPGSPGVNGQKGIPGDPAFGHLGPPG 771 Query: 920 GHGPSGAAIRFDGPHGQPGGGIRFEGPLLQQGVGMRFEGPHGQSVAGLRFEGQHNQLGGN 979 G SG GP G PG EGP G + +GP G+ G+ Sbjct: 772 KRGLSGVP-GIKGPRGDPGCP-GAEGPAGIPGF-LGLKGPKGRE--------------GH 814 Query: 980 LRFEGPHGQPGVGIRFEGP-LVQQGGGMRFEG-PSVPG-----GGLRIEGPLGQGG---- 1028 F G G PG P + Q G + G P PG G + GP G G Sbjct: 815 AGFPGVPGPPGHSCERGAPGIPGQPGLPGYPGSPGAPGGKGQPGDVGPPGPAGMKGLPGL 874 Query: 1029 PRFEGCHALRFDGQPGQPSLLPRF--DGLHGQPGPRFERTPGQPGPQRFDGPPGQQVQPR 1086 P G H G PG P + F DGL G PGP+ R G PG F G PG++ +P Sbjct: 875 PGRPGAH-----GPPGLPGIPGPFGDDGLPGPPGPKGPR--GLPG---FPGFPGERGKPG 924 Query: 1087 FDGVPQRFDGPQHQQASRFDIPLGLQGTR-FDNHPSQRLESVSFNQTGPYNDP------- 1138 +G P P + S GL+G + P E +Q G +P Sbjct: 925 AEGCPGAKGEPGEKGMSGLPGDRGLRGAKGAIGPPGDEGEMAIISQKGTPGEPGPPGDDG 984 Query: 1139 -PGNAFNAPSQGLQFQRHEQIFDSPQG-----PNFNGPHGP 1173 PG + + G+Q +R E P G P G GP Sbjct: 985 FPGERGDKGTPGMQGRRGEPGRYGPPGFHRGEPGEKGQPGP 1025 Score = 89.0 bits (219), Expect = 3e-17 Identities = 136/438 (31%), Positives = 157/438 (35%), Gaps = 93/438 (21%) Query: 772 GPNKLSPRIDGPPTPASLRFDGSPGQMGGGGPLRFEGPQGQLGGGCPLRFEGPPGPVGTP 831 G L I P P GSPG G G GP+G G P GPPGP G P Sbjct: 1033 GSTGLRGFIGFPGLPGDQGEPGSPGPPGFSGIDGARGPKGNKGD--PASHFGPPGPKGEP 1090 Query: 832 LRFEGPIGQAGGGGFRFEGSPGLR----FEGSPGGLRFEGPGGQPVGGLRFEGHRGQPVG 887 G G G G +G PG++ G PG GP G P G G RGQP G Sbjct: 1091 -GSPGCPGHFGASG--EQGLPGIQGPRGSPGRPGPPGSSGPPGCP-GDHGMPGLRGQP-G 1145 Query: 888 GLRFEGPHGQPVGGLRFDNPRGQPVGGLRFEGGHGPSGAAIRFDGPHGQPG--GGIRFEG 945 + GP G +G P G GP G GP G PG G +G Sbjct: 1146 EMGDPGPRGL----------QGDP-------GIPGPPG----IKGPSGSPGLNGLHGLKG 1184 Query: 946 PLLQQGV-GMRFEGPHGQ-SVAGLRFE-GQHNQLG----GNLRFEGPHGQPGVGIRFEGP 998 +G G+ GP G + GL+ E G G G +GP G PG GP Sbjct: 1185 QKGTKGASGLHDVGPPGPVGIPGLKGERGDPGSPGISPPGPRGKKGPPGPPG----SSGP 1240 Query: 999 LVQQGGGMR----FEGPSVPGGGLRIEGPLGQGGPRFEGCHALRFDGQPGQPSLLPRFDG 1054 G R P PG +GP G GPR G PG P L D Sbjct: 1241 PGPAGATGRAPKDIPDPGPPGD----QGPPGPDGPR----------GAPGPPGLPGSVDL 1286 Query: 1055 LHGQPGPRFERTPGQPGPQRFDGPPGQQVQPRFDGV-----PQRFDGPQHQQASRFDIPL 1109 L G+PG PG PGP GPPG + P DG P F GPQ F P Sbjct: 1287 LRGEPGDC--GLPGPPGPPGPPGPPGYKGFPGCDGKDGQKGPVGFPGPQGPHG--FPGPP 1342 Query: 1110 GLQGTRFDNHPSQRLESVSFNQTGPYND--PPGNAFNAPSQGLQFQRHEQIFDSPQGPNF 1167 G +G P GP + PP + + P +I P P Sbjct: 1343 GEKGL-----PGPPGRKGPTGLPGPRGEPGPPADVDDCP----------RIPGLPGAPGM 1387 Query: 1168 NGPHG----PGNQSFSNP 1181 GP G PG + S P Sbjct: 1388 RGPEGAMGLPGMRGPSGP 1405 Score = 85.9 bits (211), Expect = 3e-16 Identities = 109/354 (30%), Positives = 135/354 (38%), Gaps = 56/354 (15%) Query: 771 EGPNKLSPRIDGPPTPASLRFDGSPGQMGGGGPLRFEGPQGQLGGGCPLRFEGPPGPVGT 830 +GP SP GPP + G PG G G G G++G P +G PG G Sbjct: 1111 QGPRG-SPGRPGPPGSS-----GPPGCPGDHGMPGLRGQPGEMGDPGPRGLQGDPGIPGP 1164 Query: 831 PLRFEGPIGQAGGGGFRFEGSPGLRFEGSPGGLRFEGPGGQPVGGLRFEGHRGQPVG-GL 889 P +GP G G G G G + GL GP G PVG +G RG P G+ Sbjct: 1165 P-GIKGPSGSPGLNG--LHGLKGQKGTKGASGLHDVGPPG-PVGIPGLKGERGDPGSPGI 1220 Query: 890 RFEGPHGQ--PVGGLRFDNPRGQPVGGLRF----------EGGHGPSGAAIRFDGPHGQP 937 GP G+ P G P G P G G GP G DGP G P Sbjct: 1221 SPPGPRGKKGPPGPPGSSGPPG-PAGATGRAPKDIPDPGPPGDQGPPGP----DGPRGAP 1275 Query: 938 G-GGIRFEGPLLQQGVG-MRFEGPHG----QSVAGLR-FEGQHNQLG--GNLRFEGPHGQ 988 G G+ LL+ G GP G G + F G + G G + F GP G Sbjct: 1276 GPPGLPGSVDLLRGEPGDCGLPGPPGPPGPPGPPGYKGFPGCDGKDGQKGPVGFPGPQGP 1335 Query: 989 PGVGIRFEGPLVQQGGGMRFEGPSVPGGGLRIEGPLGQGGPRFEGCHALRFDGQPGQPSL 1048 G F GP ++G GP G + GP G+ GP + R G PG P + Sbjct: 1336 HG----FPGPPGEKG----LPGPPGRKGPTGLPGPRGEPGPPADVDDCPRIPGLPGAPGM 1387 Query: 1049 -----LPRFDGLHGQPGPRFERTPGQPGPQRFD------GPPGQQVQPRFDGVP 1091 G+ G GP + PG G + D GPPG++ DG P Sbjct: 1388 RGPEGAMGLPGMRGPSGPGCKGEPGLDGRRGVDGVPGSPGPPGRKGDTGEDGYP 1441 Score = 81.6 bits (200), Expect = 5e-15 Identities = 133/434 (30%), Positives = 161/434 (37%), Gaps = 87/434 (20%) Query: 782 GPPTPASLRFDGSPGQ-----MGGGGPLRFEGPQGQLG-GGCPLRFEGPPGPVGTPLRFE 835 GPP P L G PG+ +G GP F G G G G P R + PG G P Sbjct: 385 GPPGPPGLL--GRPGEACAGMIGPPGPQGFPGLPGLPGEAGIPGRPDSAPGKPGKP---- 438 Query: 836 GPIGQAGGGGFRFEGSPGLRF----EGSPGGLRFEGPGGQPVGGLRFEGHRGQP------ 885 G G G G +G PG G+PG +G G P GG +G +G Sbjct: 439 GSPGLPGAPGL--QGLPGSSVIYCSVGNPGPQGIKGKVGPP-GGRGPKGEKGNEGLCACE 495 Query: 886 VGGLRFEGPHGQPVGGLRFDNPRGQPVGGLRFEGGHGPSGAAIRFDGPHGQPG------- 938 G + GP G P G G P G L +G GP GA +GP G PG Sbjct: 496 PGPMGPPGPPGLP-GRQGSKGDLGLP-GWLGTKGDPGPPGA----EGPPGLPGKHGASGP 549 Query: 939 -GGIRFEGPLLQQGV-GMRFE-GPHGQSVAGLRFEGQHNQLGGNLRFEGPHGQPGVGIRF 995 G +G ++ V G + E GP G F GQ G + G G PG Sbjct: 550 PGNKGAKGDMVVSRVKGHKGERGPDGPP----GFPGQPGSHGRD-GHAGEKGDPGPPGDH 604 Query: 996 EGPLVQQGGGMRFEGPSVPGGGLRIEGPLGQG--GPRFEGCHALRFDGQPGQPSLLPRFD 1053 E GG F GP P G GP G G GP E H G PG P + D Sbjct: 605 EDATP---GGKGFPGPLGPPGKAGPVGPPGLGFPGPPGERGHP----GVPGHPGVRGP-D 656 Query: 1054 GLHGQPGPRFERT---PGQPGPQRFDGPPGQQVQPRFDGVPQRFDGPQHQQASRFDIPLG 1110 GL GQ G PG+ GP FDGPPG P+ F GPQ G Sbjct: 657 GLKGQKGDTISCNVTYPGRHGPPGFDGPPG----------PKGFPGPQGAP--------G 698 Query: 1111 LQGTRFDNHPSQRLESVSFNQTGPYNDPPGNAFNAPSQGLQFQRHEQIFDSPQGPNFNGP 1170 L G+ D H + T PPG + G ++ P P G Sbjct: 699 LSGS--DGHKGR----PGTPGTAEIPGPPGFRGDMGDPGFGGEKGSSPVGPPGPPGSPGV 752 Query: 1171 HG----PGNQSFSN 1180 +G PG+ +F + Sbjct: 753 NGQKGIPGDPAFGH 766 Score = 79.0 bits (193), Expect = 3e-14 Identities = 125/433 (28%), Positives = 151/433 (34%), Gaps = 89/433 (20%) Query: 778 PRIDGPPTPASLRFDGSPGQMGGGGPLRFEGPQGQLGGGCPLRFEGPPGPVGTPLRFEGP 837 P GPP P G G G G F G +G LG G PL G G G + G Sbjct: 124 PGHPGPPGPRGK--PGMSGHNGSRGDPGFPGGRGALGPGGPLGHPGEKGEKGNSVFILGA 181 Query: 838 IGQAGGGGFRFEGSPGLRFEGSPGGLRFEGPGGQPVGGLRFEGHRGQPVGGLRFEGPHGQ 897 + G G PGL G PG GP G G+ G+P GL GP GQ Sbjct: 182 VKGIQGD----RGDPGL--PGLPGSWGAGGPAGPT-------GYPGEP--GL--VGPPGQ 224 Query: 898 PVGGLRFDNPRGQPVGGLRFEGGHGPSGAAIRFDGPHGQPGGGIRFEGP---LLQQGVGM 954 P NP G+ +G G G G G PG + E P L + G+ Sbjct: 225 PGRPGLKGNP------GVGVKGQMGDPGEV----GQQGSPGPTLLVEPPDFCLYKGEKGI 274 Query: 955 R-------FEGPHGQS-VAGLRFEGQHNQLGGNLRFEGPHGQPGV-------GIRFEGPL 999 + GP G+ +G+ +G+ G F GP G PG G++ E L Sbjct: 275 KGIPGMVGLPGPPGRKGESGIGAKGEKGIPG----FPGPRGDPGSYGSPGFPGLKGELGL 330 Query: 1000 VQQGGGMRFEGPSVPGGGLRIEGPLG------------QGGPRFEGCHALRFD-GQPGQP 1046 V G GP G GP G G P F G + D G PG P Sbjct: 331 VGDPGLFGLIGPKGDPGNRGHPGPPGVLVTPPLPLKGPPGDPGFPGRYGETGDVGPPGPP 390 Query: 1047 SLLPRFDGLHGQPGPRFERTPGQPGPQRFDGPPGQQVQPRFDGVPQRFDG-PQHQQASRF 1105 LL G+PG G PGPQ F G PG + G P G P + Sbjct: 391 GLL-------GRPGEACAGMIGPPGPQGFPGLPGLPGEAGIPGRPDSAPGKPGKPGSPGL 443 Query: 1106 DIPLGLQGTRFDNHPSQRLESVSFNQTGPYN-----DPPGNAFNAPSQGLQFQRHEQIFD 1160 GLQG P + S GP PPG +G +E + Sbjct: 444 PGAPGLQGL-----PGSSVIYCSVGNPGPQGIKGKVGPPGGRGPKGEKG-----NEGLCA 493 Query: 1161 SPQGPNFNGPHGP 1173 GP GP GP Sbjct: 494 CEPGP--MGPPGP 504 Score = 77.0 bits (188), Expect = 1e-13 Identities = 146/517 (28%), Positives = 187/517 (36%), Gaps = 84/517 (16%) Query: 778 PRIDGPP-TPASLRFDGSPGQMGGGGPLRFEGPQGQLGGGCPLRFEGPPGPVGTPLRFEG 836 P +GP P L G G+ G G F G G G C G PG G P + G Sbjct: 791 PGAEGPAGIPGFLGLKGPKGREGHAG---FPGVPGPPGHSCERGAPGIPGQPGLP-GYPG 846 Query: 837 PIGQAGGGGFRFE-GSPG----LRFEGSPGGLRFEGPGGQP-----------VGGLRFEG 880 G GG G + G PG G PG GP G P G +G Sbjct: 847 SPGAPGGKGQPGDVGPPGPAGMKGLPGLPGRPGAHGPPGLPGIPGPFGDDGLPGPPGPKG 906 Query: 881 HRGQPVGGLRFEGPHGQPVGGLRFDNPRGQP----VGGLRFEGG-HGPSGAAIRFDGPHG 935 RG P G F G G+P G +G+P + GL + G G GA GP G Sbjct: 907 PRGLP-GFPGFPGERGKP-GAEGCPGAKGEPGEKGMSGLPGDRGLRGAKGAI----GPPG 960 Query: 936 QPGGGIRFEGPLLQQGVGMRFEGPHGQSVAGLRFEGQHNQLGGNLRFEGPHGQPGVGIRF 995 G E ++ Q GP G F G+ G +G G+PG R+ Sbjct: 961 DEG-----EMAIISQKGTPGEPGPPGDD----GFPGERGD-KGTPGMQGRRGEPG---RY 1007 Query: 996 EGPLVQQGGGMRFEGPSVPGGGLRIEGPLGQGGPR-FEGCHALRFD-GQPGQPSLLPRFD 1053 P +G P PG GP G G R F G L D G+PG P P F Sbjct: 1008 GPPGFHRGEPGEKGQPGPPGP----PGPPGSTGLRGFIGFPGLPGDQGEPGSPG-PPGFS 1062 Query: 1054 GLHGQPGPRFERTPGQPG-PQRFDGPPGQQVQPRFDGVPQRFDGPQHQQASRFDIPLGLQ 1112 G+ G GP+ G G P GPPG + +P G P F Q +P G+Q Sbjct: 1063 GIDGARGPK-----GNKGDPASHFGPPGPKGEPGSPGCPGHFGASGEQ-----GLP-GIQ 1111 Query: 1113 GTRFDNHPSQRLESVSFNQTGP--YNDPPGNAFNAPSQGLQFQRHEQIFDSPQG----PN 1166 G R S + GP + PPG + GL+ Q E P+G P Sbjct: 1112 GPR-----------GSPGRPGPPGSSGPPGCPGDHGMPGLRGQPGEMGDPGPRGLQGDPG 1160 Query: 1167 FNGPHGPGNQSFSNPLNRASGHYFDEKNLQSSQFGNFGNIPAPMTVGNIQASQ--QVLSG 1224 GP G S S LN G + +S + G P P+ + ++ + G Sbjct: 1161 IPGPPGIKGPSGSPGLNGLHGLKGQKGTKGASGLHDVGP-PGPVGIPGLKGERGDPGSPG 1219 Query: 1225 VAQPVAFGQGQQFLPVHPQNPGFVQNPSGALPKAYPD 1261 ++ P G+ P P +G PK PD Sbjct: 1220 ISPPGPRGKKGPPGPPGSSGPPGPAGATGRAPKDIPD 1256 Score = 56.6 bits (135), Expect = 2e-07 Identities = 66/202 (32%), Positives = 79/202 (39%), Gaps = 46/202 (22%) Query: 755 PSRPSVARDGPTKMIFEGPNKLSPRIDGPPTPASLR-FDGSPGQMGGGGPLRFEGPQGQL 813 P + R P GP P GPP P + F G G+ G GP+ F GPQG Sbjct: 1281 PGSVDLLRGEPGDCGLPGP----PGPPGPPGPPGYKGFPGCDGKDGQKGPVGFPGPQG-- 1334 Query: 814 GGGCPLRFEGPPGPVGTPLRFEGPIGQAGGGGFRF-EGSPG--------LRFEGSPGGLR 864 P F GPPG G P GP G+ G G G PG R G PG Sbjct: 1335 ----PHGFPGPPGEKGLP----GPPGRKGPTGLPGPRGEPGPPADVDDCPRIPGLPGAPG 1386 Query: 865 FEGP-GGQPVGGLR---FEGHRGQP-VGGLR-FEGPHGQPVGGLRFDNPRGQ--PVGGLR 916 GP G + G+R G +G+P + G R +G G P P G+ G Sbjct: 1387 MRGPEGAMGLPGMRGPSGPGCKGEPGLDGRRGVDGVPGSP-------GPPGRKGDTGEDG 1439 Query: 917 FEGGHGPSGAAIRFDGPHGQPG 938 + GG GP GP G PG Sbjct: 1440 YPGGPGP-------PGPIGDPG 1454 Score = 33.5 bits (75), Expect = 1.6 Identities = 24/57 (42%), Positives = 25/57 (43%), Gaps = 12/57 (21%) Query: 792 DGSPGQMGGGGPLRFEGPQGQLGGGCPLRFEGPPGPVGTPLRFEGPIGQAGG--GGF 846 DG PG G G G G GG GPPGP+G P GP G G GGF Sbjct: 1420 DGVPGSPGPPGRKGDTGEDGYPGG------PGPPGPIGDP----GPKGFGPGYLGGF 1466 >gi|4502961 alpha 1 type VII collagen precursor [Homo sapiens] Length = 2944 Score = 94.0 bits (232), Expect = 1e-18 Identities = 159/534 (29%), Positives = 199/534 (37%), Gaps = 105/534 (19%) Query: 777 SPRIDGPPTPASLR------FDGSPGQMGGGGPLRFEGPQGQLGGGCPLRFEGPPGPVGT 830 SP GP P + DG+PG G G +GP+G G P G PGP+G Sbjct: 1431 SPGPQGPVGPPGKKGEKGDSEDGAPGLPGQPGSPGEQGPRGPPGAIGPKGDRGFPGPLGE 1490 Query: 831 PLRFEGPIGQAGGGGFRFEGSPGLRFEGSPGGLRFEGPGGQPVGGLRFEGHRGQP----V 886 +G G G G R G PG+ G PG EGP G P G +G G+P V Sbjct: 1491 AGE-KGERGPPGPAGSR--GLPGV--AGRPGAKGPEGPPG-PTGRQGEKGEPGRPGDPAV 1544 Query: 887 GGLRFEGPHGQ--------PVGGLRFDNPRGQPVGGLRFEGGHGPSG-----AAIRFDGP 933 G GP G+ P G RG P GL G GP G I G Sbjct: 1545 VGPAVAGPKGEKGDVGPAGPRGATGVQGERGPP--GLVLPGDPGPKGDPGDRGPIGLTGR 1602 Query: 934 HGQPGGGIRFEGPLLQQGVGMRFEGPHGQSVAGLRFEGQHNQLGGNLRFEGPHGQPGV-- 991 G PG GP ++G R GP G V +G+ + G EGP G PG+ Sbjct: 1603 AGPPGD----SGPPGEKGDPGR-PGPPG-PVGPRGRDGEVGEKGD----EGPPGDPGLPG 1652 Query: 992 -----GIR----FEGPLVQQG--------GGMRFEGPSVPGGGLRIEGPLGQGGPRFEGC 1034 G+R GP+ ++G G G S P G GP G G + Sbjct: 1653 KAGERGLRGAPGVRGPVGEKGDQGDPGEDGRNGSPGSSGPKGDRGEPGPPGPPGRLVDTG 1712 Query: 1035 HALRFDGQPGQPSLLPRFDGLHGQPGPRFER-------TPGQPGPQRFDGPPGQQVQPRF 1087 R G+PG GQ GPR + PG+ G + F GPPG Q P Sbjct: 1713 PGAREKGEPGD----------RGQEGPRGPKGDPGLPGAPGERGIEGFRGPPGPQGDP-- 1760 Query: 1088 DGVPQRFDGPQHQQASRFDIPLGLQG-TRFDNHPSQRLESVSFNQTGPYNDPPGNAFNAP 1146 GV GP ++ R P GL G + D P + +GP N G A + Sbjct: 1761 -GV----RGPAGEKGDRG--PPGLDGRSGLDGKPG------AAGPSGP-NGAAGKAGDPG 1806 Query: 1147 SQGLQFQRHEQIFDSPQGPNFNGPHGPGNQSFSNPLNRASGHYFDEKNLQSSQFGNFGNI 1206 GL R EQ P GP G G + LN +G D + + G G+ Sbjct: 1807 RDGLPGLRGEQGLPGPSGP--PGLPGKPGEDGKPGLNGKNGEPGDPG--EDGRKGEKGDS 1862 Query: 1207 PAPMTVG-NIQASQQVLSGVAQPVAFGQGQQFL--PVHPQNPGFVQNPSGALPK 1257 A G + ++ G+ P QG L PV P GF P G PK Sbjct: 1863 GASGREGRDGPKGERGAPGILGP----QGPPGLPGPVGPPGQGFPGVPGGTGPK 1912 Score = 87.8 bits (216), Expect = 7e-17 Identities = 123/382 (32%), Positives = 149/382 (39%), Gaps = 67/382 (17%) Query: 793 GSPGQMGGGGPLRFEGPQGQLGGGCPLRFEGPPGPVGTPLRFEGPIGQAGGGGFRFEGSP 852 G PG+ G GP G QG G P+ G PGP G P GP G G G + G P Sbjct: 2153 GLPGERGMAGPEGKPGLQGPRGPPGPVGGHGDPGPPGAP-GLAGPAGPQGPSGLK--GEP 2209 Query: 853 GLRFEGSPGGLRFEGPGGQPVGGLRFEGHRGQPVGGLRFEGPHGQPVGGLRFDNPRGQPV 912 G E P G G P G + G P G GP G P GL GQ V Sbjct: 2210 G---ETGPPGRGLTG----PTGAVGLPG----PPGPSGLVGPQGSP--GL-----PGQ-V 2250 Query: 913 GGLRFEGGHGPSGAAIRFDGPHGQPG--GGIRFEGPLLQQGVGMRFEGPHGQSVAGL--- 967 G G G GA+ + DG G PG G GP+ +G P GQ+V GL Sbjct: 2251 GETGKPGAPGRDGASGK-DGDRGSPGVPGSPGLPGPVGPKGEPGPTGAP-GQAVVGLPGA 2308 Query: 968 -RFEGQHNQLGGNLRFE-GPHGQPGVGIRFEGPLVQQGGGMRFEGPSVPGGGLRIEGPLG 1025 +G L G+L E G G G+ GP ++G R P PG +G G Sbjct: 2309 KGEKGAPGGLAGDLVGEPGAKGDRGL----PGPRGEKGEAGRAGEPGDPGE----DGQKG 2360 Query: 1026 QGGPR-FEGCHALRFDGQPGQPSL--------------LPRFDGLHGQPGPRFERTPGQP 1070 GP+ F+G + G PG P P G GQ GPR E GQP Sbjct: 2361 APGPKGFKGDPGVGVPGSPGPPGPPGVKGDLGLPGLPGAPGVVGFPGQTGPRGEM--GQP 2418 Query: 1071 GP---QRFDGPPGQQVQPRFDGVP-----QRFDGPQHQQASRFDIPLGLQGTRFD-NHPS 1121 GP + GPPG++ P G P G + + D +GL G R + P Sbjct: 2419 GPSGERGLAGPPGREGIPGPLGPPGPPGSVGPPGASGLKGDKGDPGVGLPGPRGERGEPG 2478 Query: 1122 QRLESVSFNQTGP--YNDPPGN 1141 R E Q GP PPG+ Sbjct: 2479 IRGEDGRPGQEGPRGLTGPPGS 2500 Score = 83.6 bits (205), Expect = 1e-15 Identities = 126/432 (29%), Positives = 161/432 (37%), Gaps = 82/432 (18%) Query: 778 PRIDGPPTPASLRFD-------------GSPGQMGGGGPLRFEGPQGQLGGGCPLRFEGP 824 P GPP P ++ D G PGQ G G + GP G+ G P EG Sbjct: 2376 PGSPGPPGPPGVKGDLGLPGLPGAPGVVGFPGQTGPRGEMGQPGPSGERGLAGPPGREGI 2435 Query: 825 PGPVGTPLRFEGPIGQAGGGGFRFE-GSPGLRFEGSPGGLRFEGPGGQPVGGLRFEGHRG 883 PGP+G P G +G G G + + G PG+ G PG G G+P G+R E R Sbjct: 2436 PGPLGPP-GPPGSVGPPGASGLKGDKGDPGV---GLPGP---RGERGEP--GIRGEDGRP 2486 Query: 884 QPVGGLRFEGPHGQPVGGLRFDNPRGQPVGGLRFEGGHGPSGAAIRFDGPHGQPGGGIRF 943 G GP G R + VG +G G S + GP G G + Sbjct: 2487 GQEGPRGLTGPPGS-----RGERGEKGDVGSAGLKGDKGDSAVILGPPGPRGAK-GDMGE 2540 Query: 944 EGPL-LQQGVGMRFEG--PHGQSVAGLRFEGQHNQLGGNLRFEGPHGQPGV--------- 991 GP L G R + P + G + L G GP GQPG Sbjct: 2541 RGPRGLDGDKGPRGDNGDPGDKGSKGEPGDKGSAGLPGLRGLLGPQGQPGAAGIPGDPGS 2600 Query: 992 -------GIRFEGPLVQQGGGMRFEGPSVPGGGLRIEGPLGQGGPRFEGCHALRFDGQPG 1044 GIR E G + F GP G ++G G G + + A G PG Sbjct: 2601 PGKDGVPGIRGE------KGDVGFMGPRGLKGERGVKGACGLDGEKGDKGEA----GPPG 2650 Query: 1045 QPSLLPRFDGLHGQPGPRFERTPGQPGPQRFDGPPGQQVQPRFDGVPQRFDGPQHQQASR 1104 +P L G G+PG PGQ G +G G + FDG P GP+ Q + Sbjct: 2651 RPGLAGH-KGEMGEPG-----VPGQSGAPGKEGLIGPKGDRGFDGQP----GPKGDQGEK 2700 Query: 1105 FDIPLGLQGT-RFDNHPSQRLESVSFNQTGPYNDPPGNAFNAPSQGLQFQRHEQIFDSPQ 1163 G +GT P S + GP PPG+ +GLQ Q+ E+ P Sbjct: 2701 -----GERGTPGIGGFPG---PSGNDGSAGP-PGPPGSVGPRGPEGLQGQKGER---GPP 2748 Query: 1164 GPNFNGPHG-PG 1174 G G G PG Sbjct: 2749 GERVVGAPGVPG 2760 Score = 81.6 bits (200), Expect = 5e-15 Identities = 119/346 (34%), Positives = 139/346 (40%), Gaps = 50/346 (14%) Query: 755 PSRPSVARDGPTKMIFEGPNKLS--PRIDGPPTPASLRFDGSPGQMGGGGPLRFEGPQGQ 812 P P +A GP +GP+ L P GPP G+ G G GP GPQG Sbjct: 2188 PGAPGLA--GPAGP--QGPSGLKGEPGETGPPGRGLTGPTGAVGLPGPPGPSGLVGPQGS 2243 Query: 813 LGGGCPLRFEGPPGPVGTPLRFEGPIGQAGGGGFRFEGSPGLRFEGSPGGLRFEGPGGQP 872 G G G G P G G +G G R GSPG+ GSPG GP G+P Sbjct: 2244 PG------LPGQVGETGKP-GAPGRDGASGKDGDR--GSPGV--PGSPGLPGPVGPKGEP 2292 Query: 873 VGGLRFEGHRGQPVGGL-RFEGPHGQPVGGLRFDNPRGQP--VGGLRFEGGHGPSGAAIR 929 G GQ V GL +G G P GGL D G+P G G G G A R Sbjct: 2293 GP----TGAPGQAVVGLPGAKGEKGAP-GGLAGDLV-GEPGAKGDRGLPGPRGEKGEAGR 2346 Query: 930 FDGPHGQPG--GGIRFEGPLLQQGVGMRFEGPHGQSVAGLRFEGQHNQLGGNLRFEGPHG 987 P G PG G GP F+G G V G + G+L G G Sbjct: 2347 AGEP-GDPGEDGQKGAPGP-------KGFKGDPGVGVPGSPGPPGPPGVKGDLGLPGLPG 2398 Query: 988 QPGVGIRFEGPLVQQG-----GGMRFEGPSVPGGGLRIEGPLGQGGPRFE----GCHALR 1038 PGV + F G +G G G + P G I GPLG GP G L+ Sbjct: 2399 APGV-VGFPGQTGPRGEMGQPGPSGERGLAGPPGREGIPGPLGPPGPPGSVGPPGASGLK 2457 Query: 1039 FDGQPGQPSL-LPRFDGLHGQPGPRFE-RTPGQPGPQRFDGPPGQQ 1082 G G P + LP G G+PG R E PGQ GP+ GPPG + Sbjct: 2458 --GDKGDPGVGLPGPRGERGEPGIRGEDGRPGQEGPRGLTGPPGSR 2501 Score = 80.5 bits (197), Expect = 1e-14 Identities = 115/351 (32%), Positives = 137/351 (39%), Gaps = 64/351 (18%) Query: 778 PRIDGPP-TPASLRFDGSPGQMGGGGPLRFEGPQGQL----------------------G 814 P DG P +P G+PG G G GP+G G Sbjct: 1301 PGADGRPGSPGRAGNPGTPGAPGLKGSPGLPGPRGDPGERGPRGPKGEPGAPGQVIGGEG 1360 Query: 815 GGCPLRFEGPPGPVGTPLRFEGPIGQAGGGGFRF-EGSPGLRFEGSPGGLRFEGPGGQPV 873 G P R +G PGP G P GP G G G R G PG +G G GP G Sbjct: 1361 PGLPGR-KGDPGPSGPP----GPRGPLGDPGPRGPPGLPGTAMKGDKGDRGERGPPGPGE 1415 Query: 874 GGLRFEGHRGQP--VGGLRFEGPHGQP-VGGLRFDNPRGQP-----VGGLRFEGGHGPSG 925 GG+ G G P G +GP G P G + D+ G P G +G GP G Sbjct: 1416 GGIA-PGEPGLPGLPGSPGPQGPVGPPGKKGEKGDSEDGAPGLPGQPGSPGEQGPRGPPG 1474 Query: 926 AAIRFDGPHGQPGGGIRFEGPLLQQG-VGMRFEGPHGQSVAGLR-FEGQHNQLGGNLRFE 983 A GP G G F GPL + G G R GP G AG R G + G + Sbjct: 1475 AI----GPKGDRG----FPGPLGEAGEKGER--GPPGP--AGSRGLPG----VAGRPGAK 1518 Query: 984 GPHGQPG-VGIRFEGPLVQQGGGMRFEGPSVPGGGLRIEGPLGQGGPRFEGCHALRFDGQ 1042 GP G PG G + E + G GP+V G +G +G GPR A G+ Sbjct: 1519 GPEGPPGPTGRQGEKGEPGRPGDPAVVGPAV-AGPKGEKGDVGPAGPR----GATGVQGE 1573 Query: 1043 PGQPSL-LPRFDGLHGQPGPRFE-RTPGQPGPQRFDGPPGQQVQPRFDGVP 1091 G P L LP G G PG R G+ GP GPPG++ P G P Sbjct: 1574 RGPPGLVLPGDPGPKGDPGDRGPIGLTGRAGPPGDSGPPGEKGDPGRPGPP 1624 Score = 76.3 bits (186), Expect = 2e-13 Identities = 105/325 (32%), Positives = 128/325 (39%), Gaps = 52/325 (16%) Query: 782 GPPTPASLRFD-GSPGQMGGGGPLRFEGPQGQLGGGCPLRFEGPPGPVGTPLRFEGPIGQ 840 G P LR G PG G G GPQG G G PG G P G G+ Sbjct: 1257 GEPGEMGLRGQVGPPGDPGLPGRTGAPGPQGPPGSATAKGERGFPGADGRP----GSPGR 1312 Query: 841 AGGGGFRFEGSPGLRFEGSPGGLRFEGPGGQPVGGLRFEGHRGQPVGGLRFEGPHGQPVG 900 AG G G+PGL+ GSPG GP G P G G +G+P + G G + Sbjct: 1313 AGNPG--TPGAPGLK--GSPG---LPGPRGDP-GERGPRGPKGEPGAPGQVIGGEGPGLP 1364 Query: 901 GLRFD-NPRGQPVGGLRFEGGHGPSGAAIRFDGPHGQPGGGIRFEGPLLQQGVGMRFE-G 958 G + D P G P G GP G GP G PG G ++ G R E G Sbjct: 1365 GRKGDPGPSGPP-------GPRGPLGD----PGPRGPPG----LPGTAMKGDKGDRGERG 1409 Query: 959 PHGQSVAGLR-FEGQHNQLGGNLRFEGPHGQPG----VGIRFEGP--LVQQGGGMRFEGP 1011 P G G+ E L G+ +GP G PG G +G L Q G +GP Sbjct: 1410 PPGPGEGGIAPGEPGLPGLPGSPGPQGPVGPPGKKGEKGDSEDGAPGLPGQPGSPGEQGP 1469 Query: 1012 SVPGGGL------RIEGPLGQGGPRFEGCHALRFDGQPGQPSLLPRFDGLHGQPGPRF-E 1064 P G + GPLG+ G + E G PG P+ G+ G+PG + E Sbjct: 1470 RGPPGAIGPKGDRGFPGPLGEAGEKGE-------RGPPG-PAGSRGLPGVAGRPGAKGPE 1521 Query: 1065 RTPGQPGPQRFDGPPGQQVQPRFDG 1089 PG G Q G PG+ P G Sbjct: 1522 GPPGPTGRQGEKGEPGRPGDPAVVG 1546 Score = 73.9 bits (180), Expect = 1e-12 Identities = 103/340 (30%), Positives = 130/340 (38%), Gaps = 81/340 (23%) Query: 773 PNKLSPR-IDGPPTPASLRFDGSPGQMGGGGPLRFEGPQGQLGGGCPLRFEGPPGPVGTP 831 P + PR + GPP GS G+ G G + G +G G + GPPGP G Sbjct: 2486 PGQEGPRGLTGPP--------GSRGERGEKGDVGSAGLKGDKGDSAVIL--GPPGPRGAK 2535 Query: 832 --LRFEGPIGQAGGGGFRFE-GSPGLR-FEGSPG--------GLR-FEGPGGQPVGGLRF 878 + GP G G G R + G PG + +G PG GLR GP GQP G Sbjct: 2536 GDMGERGPRGLDGDKGPRGDNGDPGDKGSKGEPGDKGSAGLPGLRGLLGPQGQP-GAAGI 2594 Query: 879 EGHRGQP----VGGLRFEGPHGQPVGGLRFDNPRGQP-----VGGLRFEGGHGPSGAAIR 929 G G P V G+R E G + F PRG G +G G G A Sbjct: 2595 PGDPGSPGKDGVPGIRGEK------GDVGFMGPRGLKGERGVKGACGLDGEKGDKGEA-- 2646 Query: 930 FDGPHGQPGGGIRFEGPLLQQGVGMRFEGPHGQSVAGLR----FEGQHNQLGGNLRFEGP 985 GP G+PG +G + + GV + P + + G + F+GQ G +G Sbjct: 2647 --GPPGRPGLA-GHKGEMGEPGVPGQSGAPGKEGLIGPKGDRGFDGQPGPKGDQGE-KGE 2702 Query: 986 HGQPGVGIRFEGPLVQQGGGMRFEGPSVPGGGLRIEGPLGQGGPRFEGCHALRFDGQPGQ 1045 G PG+G F GPS G GP G GPR G G Sbjct: 2703 RGTPGIG--------------GFPGPSGNDGSAGPPGPPGSVGPR----------GPEG- 2737 Query: 1046 PSLLPRFDGLHGQPGPRFERTPGQPGPQRFDGPPGQQVQP 1085 G G+ GP ER G PG G G+Q +P Sbjct: 2738 ------LQGQKGERGPPGERVVGAPGVPGAPGERGEQGRP 2771 Score = 73.6 bits (179), Expect = 1e-12 Identities = 119/358 (33%), Positives = 144/358 (40%), Gaps = 84/358 (23%) Query: 772 GPNKLSPRIDGPPTPASLRFDGSPGQMGG---GGPLRFEGPQGQLGGGCPLRFEGPPGPV 828 GP L+ R GPP + G PG+ G GP GP+G+ G EGPPG Sbjct: 1595 GPIGLTGRA-GPPGDS-----GPPGEKGDPGRPGPPGPVGPRGRDGEVGEKGDEGPPGDP 1648 Query: 829 GTPLRFEGPIGQAGGGGFRFEGSPGLR----FEGSPGGLRFEGPGGQPVGGLRFEGHRGQ 884 G P G+AG G R G+PG+R +G G +G G P G +G RG+ Sbjct: 1649 GLP-------GKAGERGLR--GAPGVRGPVGEKGDQGDPGEDGRNGSP-GSSGPKGDRGE 1698 Query: 885 PVGGLRFEGPHGQPVGGLRFDNP----RGQPVGGLRFEGGHGPSGAAIRFDGPHGQPG-- 938 P GP G P G L P +G+P G EG GP G G G PG Sbjct: 1699 P-------GPPGPP-GRLVDTGPGAREKGEP-GDRGQEGPRGPKGD----PGLPGAPGER 1745 Query: 939 GGIRFEGPLLQQG-VGMRFEGPHGQ-SVAGLRFEGQHNQLGGNLRFEGPHGQPGVGIRFE 996 G F GP QG G+R GP G+ G + L G GP G G + Sbjct: 1746 GIEGFRGPPGPQGDPGVR--GPAGEKGDRGPPGLDGRSGLDGKPGAAGPSGPNGAAGKAG 1803 Query: 997 GPLVQQGGGMRFE----GPSVPGGGLRIEGPLGQGG-PRFEGCHALRFDGQPGQPSLLPR 1051 P G+R E GPS P G + G G+ G P G +G+PG P R Sbjct: 1804 DPGRDGLPGLRGEQGLPGPSGPPG---LPGKPGEDGKPGLNG-----KNGEPGDPGEDGR 1855 Query: 1052 --------FDGLHGQPGPRFER----------TPGQPGPQRFDGPPGQQVQPRFDGVP 1091 G G+ GP+ ER PG PGP GPPGQ F GVP Sbjct: 1856 KGEKGDSGASGREGRDGPKGERGAPGILGPQGPPGLPGPV---GPPGQ----GFPGVP 1906 Score = 73.6 bits (179), Expect = 1e-12 Identities = 140/464 (30%), Positives = 172/464 (37%), Gaps = 110/464 (23%) Query: 754 GPSRPSVARDGPTKMIFEGPNKLSPRIDGPPTPASLRFDGSPGQMGGGGPLRFEGPQGQL 813 GPS P P + +G L+ + P P G G G G +GP+G+ Sbjct: 1821 GPSGPPGLPGKPGE---DGKPGLNGKNGEPGDPGEDGRKGEKGDSGASGREGRDGPKGER 1877 Query: 814 GGGCPLRFEGP---PGPVGTPLR-FEGPIGQAGGGGFRFE-GSPGLRFEGSPG--GLRFE 866 G L +GP PGPVG P + F G G G G R E GS G +G PG GLR E Sbjct: 1878 GAPGILGPQGPPGLPGPVGPPGQGFPGVPGGTGPKGDRGETGSKG--EQGLPGERGLRGE 1935 Query: 867 GPGGQP-------VGGLRFEG--------------------HRGQPVGGLRFEGPHGQ-- 897 PG P G++ R P G +GP G+ Sbjct: 1936 -PGSVPNVDRLLETAGIKASALREIVETWDESSGSFLPVPERRRGPKGDSGEQGPPGKEG 1994 Query: 898 PVG-----GLRFD----NPRGQPVGGLRFEGGHGPSGAAIRFDGPHGQPG-GGIRFEGPL 947 P+G GL+ D P+G P L G GPSG A G G+PG G+ P Sbjct: 1995 PIGFPGERGLKGDRGDPGPQGPPGLALGERGPPGPSGLA----GEPGKPGIPGL----PG 2046 Query: 948 LQQGVGMRFE-GPHGQ-SVAGLRFEGQHNQLGGNLRFEGPHGQPG--VGIRFEGPLV--Q 1001 GVG G G+ G R E + G GP G PG V + GP + + Sbjct: 2047 RAGGVGEAGRPGERGERGEKGERGEQGRDGPPGLPGTPGPPGPPGPKVSVDEPGPGLSGE 2106 Query: 1002 QG-----------GGMRFEGPSVPGGGLRIEGPLGQGGPRFEGCHALRFDGQPGQPSLLP 1050 QG G +GP G I+G G+ GPR + DG PG P Sbjct: 2107 QGPPGLKGAKGEPGSNGDQGPKGDRGVPGIKGDRGEPGPRGQ-------DGNPGLP---- 2155 Query: 1051 RFDGLHGQPGPRFERTPGQPGPQRFDGPPGQQVQPRFDGVPQRFDGPQHQQASRFDIPLG 1110 G G GP E PG GP+ GP G P G P GP Q P G Sbjct: 2156 ---GERGMAGP--EGKPGLQGPRGPPGPVGGHGDPGPPGAP-GLAGPAGPQG-----PSG 2204 Query: 1111 LQGTRFDNHPSQRLESVSFNQTGPYN-----DPPGNAFNAPSQG 1149 L+G + P R TGP PPG + QG Sbjct: 2205 LKGEPGETGPPGR------GLTGPTGAVGLPGPPGPSGLVGPQG 2242 Score = 72.8 bits (177), Expect = 2e-12 Identities = 138/468 (29%), Positives = 169/468 (36%), Gaps = 102/468 (21%) Query: 773 PNKLSPRID----GPPTPASLRFDGSPG--QMGGGGPLRFEGPQGQLGG----GCPLR-- 820 P P+ D GPP P D PG + G G EGP+G G G P Sbjct: 1687 PGSSGPKGDRGEPGPPGPPGRLVDTGPGAREKGEPGDRGQEGPRGPKGDPGLPGAPGERG 1746 Query: 821 ---FEGPPGPVGTPLRFEGPIGQAGGGGFRFEGSPGL----RFEGSPGGLRFEGPGGQPV 873 F GPPGP G P GP G+ G G PGL +G PG GP G Sbjct: 1747 IEGFRGPPGPQGDP-GVRGPAGEKGD-----RGPPGLDGRSGLDGKPGAAGPSGPNG-AA 1799 Query: 874 GGLRFEGHRGQPVGGLRFE----GPHGQP----------VGGLRFDNPRGQPVGGLRFEG 919 G G G P GLR E GP G P GL N G +G Sbjct: 1800 GKAGDPGRDGLP--GLRGEQGLPGPSGPPGLPGKPGEDGKPGLNGKNGEPGDPGEDGRKG 1857 Query: 920 GHGPSGAAIR--FDGPHGQ--------PGGGIRFEGPLLQQGVGMRFEG-PHGQSVAGLR 968 G SGA+ R DGP G+ P G GP+ G G F G P G G R Sbjct: 1858 EKGDSGASGREGRDGPKGERGAPGILGPQGPPGLPGPVGPPGQG--FPGVPGGTGPKGDR 1915 Query: 969 FEGQHNQLGGNLRFEGPHGQPG-----------VGIRFEG--PLVQ---QGGGMRFEGPS 1012 E G G G+PG GI+ +V+ + G P Sbjct: 1916 GETGSKGEQGLPGERGLRGEPGSVPNVDRLLETAGIKASALREIVETWDESSGSFLPVPE 1975 Query: 1013 ---VPGGGLRIEGPLGQGGP-RFEGCHALRFD----GQPGQPSLL------PRFDGLHGQ 1058 P G +GP G+ GP F G L+ D G G P L P GL G+ Sbjct: 1976 RRRGPKGDSGEQGPPGKEGPIGFPGERGLKGDRGDPGPQGPPGLALGERGPPGPSGLAGE 2035 Query: 1059 PG-PRFERTPGQPGPQRFDGPPGQQVQPRFDGVPQRFDGPQHQQASRFDIPLGLQGTRFD 1117 PG P PG+ G G PG++ +R + + + R D P GL GT Sbjct: 2036 PGKPGIPGLPGRAGGVGEAGRPGER--------GERGEKGERGEQGR-DGPPGLPGT--P 2084 Query: 1118 NHPSQRLESVSFNQTGPYNDPPGNAFNAPSQGLQFQRHEQIFDSPQGP 1165 P VS ++ G PG + GL+ + E + QGP Sbjct: 2085 GPPGPPGPKVSVDEPG-----PGLSGEQGPPGLKGAKGEPGSNGDQGP 2127 Score = 69.7 bits (169), Expect = 2e-11 Identities = 105/360 (29%), Positives = 130/360 (36%), Gaps = 70/360 (19%) Query: 749 RPLFDGPSRPSVARDGPT-KMIFEGPNKLSPRIDGPPTPASLR----FDGSPGQMGGGGP 803 RP GP P RDG + EGP P + G LR G G+ G G Sbjct: 1620 RPGPPGPVGPR-GRDGEVGEKGDEGPPG-DPGLPGKAGERGLRGAPGVRGPVGEKGDQGD 1677 Query: 804 LRFEGPQGQLGGGCPLRFEGPPGPVGTPLRFEGPIGQAGGGGFRFEGSPGLRFEGSPGGL 863 +G G G P G PGP G P R G G R +G PG R + P G Sbjct: 1678 PGEDGRNGSPGSSGPKGDRGEPGPPGPPGRLVDT-----GPGAREKGEPGDRGQEGPRGP 1732 Query: 864 RFE-GPGGQPVGGLRFEGHRGQPVGGLRFEGPHGQPVGGLRFDNPRGQPVGGLRFEGGHG 922 + + G G P G EG RG P GP G P G+R P G+ +G G Sbjct: 1733 KGDPGLPGAP-GERGIEGFRGPP-------GPQGDP--GVR--GPAGE-------KGDRG 1773 Query: 923 PSGAAIRFDGPHGQPGGGIRFEGPLLQQGVGMRFEGPHGQSVAGLRFEGQHNQLGGNLRF 982 P G R G G+PG GP G + P + GLR G Sbjct: 1774 PPGLDGR-SGLDGKPGAA----GPSGPNGAAGKAGDPGRDGLPGLR---------GEQGL 1819 Query: 983 EGPHGQPGVGIRFEGPLVQQGGGMRFEGPSVPG--------GGLRIEGPLGQGGPRFEGC 1034 GP G PG+ + G + G + P PG G G G+ GP+ Sbjct: 1820 PGPSGPPGLPGK-PGEDGKPGLNGKNGEPGDPGEDGRKGEKGDSGASGREGRDGPK---- 1874 Query: 1035 HALRFDGQPGQPSLL-----PRFDGLHGQPGPRFERTPGQPGPQRFDGPPGQQVQPRFDG 1089 G+ G P +L P G G PG F PG GP+ G G + + G Sbjct: 1875 ------GERGAPGILGPQGPPGLPGPVGPPGQGFPGVPGGTGPKGDRGETGSKGEQGLPG 1928 Score = 43.1 bits (100), Expect = 0.002 Identities = 60/204 (29%), Positives = 78/204 (38%), Gaps = 44/204 (21%) Query: 983 EGPHGQPG-VGIRFE-GPLVQQG--GGMRFEGPSVPGGGLRIEGPLGQGGPRFEGCHALR 1038 +G G+PG +G+R + GP G G GP P G +G G G Sbjct: 1253 KGQKGEPGEMGLRGQVGPPGDPGLPGRTGAPGPQGPPGSATAKGERGFPGA--------- 1303 Query: 1039 FDGQPGQPSLLPRFDGLHGQPG-PRFERTPGQPGPQRFD----GPPGQQVQPRFDGVPQR 1093 DG+PG P G G PG P + +PG PGP R D GP G + +P G Sbjct: 1304 -DGRPGSPGRA----GNPGTPGAPGLKGSPGLPGP-RGDPGERGPRGPKGEPGAPGQVIG 1357 Query: 1094 FDGPQHQQASRFDIPLGLQGTRFDNHPSQRLESVSFNQTGPYNDP-PGNAFNAPSQGLQF 1152 +GP GL G + D PS GP DP P P ++ Sbjct: 1358 GEGP------------GLPGRKGDPGPSG-----PPGPRGPLGDPGPRGPPGLPGTAMKG 1400 Query: 1153 QRHEQIFDSPQGPNFNG--PHGPG 1174 + ++ P GP G P PG Sbjct: 1401 DKGDRGERGPPGPGEGGIAPGEPG 1424 >gi|89142737 alpha 3 type IV collagen isoform 5 precursor [Homo sapiens] Length = 1424 Score = 94.0 bits (232), Expect = 1e-18 Identities = 111/346 (32%), Positives = 135/346 (39%), Gaps = 65/346 (18%) Query: 782 GPPTPASLRFDGSPGQMGGGGPLRFEGPQGQLGGGCPLRFEGPPGPVGTP--------LR 833 GPP P G PG MG G + GP G LG P G PG G P L Sbjct: 1065 GPPGPTG--DPGLPGDMGKKGEMGQPGPPGHLGPAGPEGAPGSPGSPGLPGKPGPHGDLG 1122 Query: 834 FEGPIGQAGGGGFRFEGSPGL-RFEGSPGGLRFEGPGGQPVGGLRFEGHRGQPVGGLRF- 891 F+G G G G R G PGL F GSPG + G G+ G G +G+ G LR Sbjct: 1123 FKGIKGLLGPPGIR--GPPGLPGFPGSPGPMGIRGDQGRD-GIPGPAGEKGE-TGLLRAP 1178 Query: 892 EGPHGQPVGGLRFDNPRGQP--------VGGLRFEGGHGPSGAAIRFDGPHGQPG----G 939 GP G P G RG P G + G GP+G F GP G PG G Sbjct: 1179 PGPRGNP-GAQGAKGDRGAPGFPGLPGRKGAMGDAGPRGPTGIE-GFPGPPGLPGAIIPG 1236 Query: 940 GIRFEGPLLQQGV--GMRFEGPHGQSVAGLRFEGQHNQLGGNLRFEGPHGQPGVGIRFEG 997 GP +G GP G V G++ + G++ GP G PG G Sbjct: 1237 QTGNRGPPGSRGSPGAPGPPGPPGSHVIGIKGD------KGSMGHPGPKGPPGTA----G 1286 Query: 998 PLVQQGGGMRFEGPSVPGGGLRIEGPLGQGGPRFEGCHALRFDGQPGQPSLLPRF----- 1052 + G R P PG + GP +G P F+G ++ G+ G P L Sbjct: 1287 DMGPPG---RLGAPGTPG----LPGP--RGDPGFQGFPGVK--GEKGNPGFLGSIGPPGP 1335 Query: 1053 ------DGLHGQPGP-RFERTPGQPGPQRFDGPPGQQVQPRFDGVP 1091 G+ G PG + PG PGP G PG Q +P G P Sbjct: 1336 IGPKGPPGVRGDPGTLKIISLPGSPGPPGTPGEPGMQGEPGPPGPP 1381 Score = 85.1 bits (209), Expect = 5e-16 Identities = 133/442 (30%), Positives = 167/442 (37%), Gaps = 86/442 (19%) Query: 772 GPNKLSPRIDGPPTPASLRFDGSPGQMGGGGPLRFEGPQGQLGGGCPLRFEGPPGPVGTP 831 GP+++S I P F G+PG+ G G G +G +G PGP G P Sbjct: 943 GPSEISHVIGDKGEPGLKGFAGNPGEKGNRGVPGMPGLKG---------LKGLPGPAGPP 993 Query: 832 LRFEGPIGQAGGGGFRFEGSPGLR-FEGSPGGLRFEGPGGQPVGGLRFEGHRGQP-VGGL 889 GP G G G G PGLR GS G + G G+ G L F G G+P + G+ Sbjct: 994 ----GPRGDLGSTG--NPGEPGLRGIPGSMGNMGMPGSKGKR-GTLGFPGRAGRPGLPGI 1046 Query: 890 R-FEGPHGQP--VGGLRFDNPRGQPVGGLRFEGGHGPSGAAIRFDGPHGQ--PGGGIRFE 944 +G G+P G R P G P G G G G + GP G P G Sbjct: 1047 HGLQGDKGEPGYSEGTR-PGPPG-PTGDPGLPGDMGKKG-EMGQPGPPGHLGPAGPEGAP 1103 Query: 945 GPLLQQGVGMRFEGPHGQSVAGLRFEGQHNQLGGNLRFEGPHGQPG-------VGIR--- 994 G G+ + GPHG L F+G LG GP G PG +GIR Sbjct: 1104 GSPGSPGLPGK-PGPHGD----LGFKGIKGLLGPP-GIRGPPGLPGFPGSPGPMGIRGDQ 1157 Query: 995 ----FEGPLVQQGGGMRFEGPSVPGGGLRIEGPLG-QGGPRFEGCHALR----------- 1038 GP ++G P P G +G G +G P F G + Sbjct: 1158 GRDGIPGPAGEKGETGLLRAPPGPRGNPGAQGAKGDRGAPGFPGLPGRKGAMGDAGPRGP 1217 Query: 1039 -----FDGQPGQP-SLLPRFDGLHGQPGPRFERTPGQPGPQRFDGPPGQQVQPRFDGVPQ 1092 F G PG P +++P G G PG R +PG PGP GPPG V G+ Sbjct: 1218 TGIEGFPGPPGLPGAIIPGQTGNRGPPGSR--GSPGAPGP---PGPPGSHV----IGIKG 1268 Query: 1093 RFDGPQHQQASRFDIPLGLQGTRFDNHPSQRLESVSF-NQTGPYNDPPGNAFNAPSQGLQ 1151 H P G GT D P RL + GP DP F G++ Sbjct: 1269 DKGSMGHPG------PKGPPGTAGDMGPPGRLGAPGTPGLPGPRGDPGFQGF----PGVK 1318 Query: 1152 FQRHEQIFDSPQGPNFNGPHGP 1173 ++ F GP GP GP Sbjct: 1319 GEKGNPGFLGSIGP--PGPIGP 1338 Score = 80.1 bits (196), Expect = 2e-14 Identities = 132/443 (29%), Positives = 164/443 (37%), Gaps = 78/443 (17%) Query: 778 PRIDGPPTPASLRFDGSPGQMGGGGPLRFEGPQGQLGGGCPLRFEGP------------- 824 P DG P + F G PG G G F G +G L GCP + P Sbjct: 688 PGPDGEPGIPGIGFPGPPGPKGDQG---FPGTKGSL--GCPGKMGEPGLPGKPGLPGAKG 742 Query: 825 ------PGPVGTPLRFEGPIGQAG-GGGFRFEGSPGLRFEGSPGGLRFEGPGGQPVGGLR 877 PG GTP F G G +G G G PGL G+PG +GP G P G Sbjct: 743 EPAVAMPGGPGTP-GFPGERGNSGEHGEIGLPGLPGL--PGTPGNEGLDGPRGDP-GQPG 798 Query: 878 FEGHRGQPVGGLRFEGPHG-QPVGGLRFDNPRGQPVGGLRFEGGHGPSG-------AAIR 929 G +G P G EGP G Q + GL + +GQ G R G GP G Sbjct: 799 PPGEQGPP--GRCIEGPRGAQGLPGL--NGLKGQQ--GRR--GKTGPKGDPGIPGLDRSG 850 Query: 930 FDGPHGQPG--GGIRFEGPLLQQGV--GMRFEGPHGQS--VAGLRFEGQHNQLG--GNLR 981 F G G PG G GPL Q+G GP G+ + + F G G GN Sbjct: 851 FPGETGSPGIPGHQGEMGPLGQRGYPGNPGILGPPGEDGVIGMMGFPGAIGPPGPPGNPG 910 Query: 982 FEGPHGQPGV-GIRFEGPLVQQGGGMRFEGPSVPGGGLRIEGPLGQGGPR-FEGCHALRF 1039 G G PG+ G++ + G +G P + G G+ G + F G + Sbjct: 911 TPGQRGSPGIPGVKGQRGTPGAKGEQGDKGNPGPSEISHVIGDKGEPGLKGFAGNPGEKG 970 Query: 1040 D-GQPGQPSL--LPRFDGLHGQPGPRFE----RTPGQPGPQRFDGPPGQQVQPRFDGVPQ 1092 + G PG P L L G G PGPR + PG+PG + G G P G Sbjct: 971 NRGVPGMPGLKGLKGLPGPAGPPGPRGDLGSTGNPGEPGLRGIPGSMGNMGMPGSKGKRG 1030 Query: 1093 RFDGPQHQQASRFDIPLGLQGTRFDNHPSQRLESVSFNQTGPYNDP--PGNAFNAPSQGL 1150 P +A R +P G+ G + D E GP DP PG+ G Sbjct: 1031 TLGFP--GRAGRPGLP-GIHGLQGDKGEPGYSEGTRPGPPGPTGDPGLPGDMGKKGEMG- 1086 Query: 1151 QFQRHEQIFDSPQGPNFNGPHGP 1173 P P GP GP Sbjct: 1087 ----------QPGPPGHLGPAGP 1099 Score = 75.5 bits (184), Expect = 4e-13 Identities = 134/465 (28%), Positives = 165/465 (35%), Gaps = 136/465 (29%) Query: 778 PRIDGPPTPASLRFDGSPGQMGGGGP----------------------------LRFEGP 809 P D TP S GSPG G GP +GP Sbjct: 409 PGKDAMGTPGSPGCAGSPGLPGSPGPPGPPGDIVFRKGPPGDHGLPGYLGSPGIPGVDGP 468 Query: 810 QGQLG---GGCPLRFEGPPGPVGTP--LRFEGPIGQAGGGGFRFEGSPGLRFEGSPGGLR 864 +G+ G CP GPPG G P +G G+ G G + GSP GSPG Sbjct: 469 KGEPGLLCTQCPY-IPGPPGLPGLPGLHGVKGIPGRQGAAGLK--GSP-----GSPGNTG 520 Query: 865 FEG----PGGQPVGGLRFE-----------------GHRGQPVGGLRFEGPHGQPVGGLR 903 G PG Q GL+ E G RGQP G +G G P G Sbjct: 521 LPGFPGFPGAQGDPGLKGEKGETLQPEGQVGVPGDPGLRGQP-GRKGLDGIPGTP-GVKG 578 Query: 904 FDNPRGQ-----------PVGGLRFEGGHGPSG-AAIRFDGPHGQPG-----------GG 940 P+G+ P G G GP+G A GP G+PG G Sbjct: 579 LPGPKGELALSGEKGDQGPPGDPGSPGSPGPAGPAGPPGYGPQGEPGLQGTQGVPGAPGP 638 Query: 941 IRFEGPLLQQGVGMRFEGPHG----------QSVAGLRFEGQHNQLG--GNLRFEGPHGQ 988 GP + V GP G Q G+ LG G+ GP G+ Sbjct: 639 PGEAGPRGELSVSTPVPGPPGPPGPPGHPGPQGPPGI-----PGSLGKCGDPGLPGPDGE 693 Query: 989 PGV-GIRFEGPLVQQGGGMRFEGPSVPGGGLRIEGPLGQGG-------PRFEGCHALRFD 1040 PG+ GI F GP +G +G G L G +G+ G P +G A+ Sbjct: 694 PGIPGIGFPGPPGPKGD----QGFPGTKGSLGCPGKMGEPGLPGKPGLPGAKGEPAVAMP 749 Query: 1041 GQPGQPSLLPR--FDGLHGQPG-PRFERTPGQPGPQRFDGP---PGQQVQPRFDGVPQR- 1093 G PG P G HG+ G P PG PG + DGP PGQ P G P R Sbjct: 750 GGPGTPGFPGERGNSGEHGEIGLPGLPGLPGTPGNEGLDGPRGDPGQPGPPGEQGPPGRC 809 Query: 1094 FDGPQHQQASRFDIPLGLQGTRFDNHPSQRLESVSFNQTGPYNDP 1138 +GP+ Q +P GL G + +R +TGP DP Sbjct: 810 IEGPRGAQG----LP-GLNGLK--GQQGRR------GKTGPKGDP 841 Score = 74.7 bits (182), Expect = 6e-13 Identities = 114/363 (31%), Positives = 139/363 (38%), Gaps = 66/363 (18%) Query: 782 GPPTPASLRFDGSPGQMGGGGPLRFEGPQGQLGGGCPLRFEGPPGPVGTPLRFEGPIGQA 841 GPP GSPGQ G GP GPQG G F G PG G+ +G G + Sbjct: 55 GPP--------GSPGQKGFTGPEGLPGPQGPKG------FPGLPGLTGS----KGVRGIS 96 Query: 842 GGGGFRFEGSPGLRFEGSPGGLRFEGPGGQPVGGLRFEGHRGQP--VGGLRFEGPHGQPV 899 G GF GSPGL G+PG G G P G +G +G P G L + G G Sbjct: 97 GLPGF--SGSPGL--PGTPGNTGPYGLVGVP-GCSGSKGEQGFPGLPGTLGYPGIPG--A 149 Query: 900 GGLRFDNPRGQPV----------GGLRFEGGHGPSG--AAIRFDGPHGQPG--GGIRFEG 945 GL+ +G P G G GP G F GP G PG G F G Sbjct: 150 AGLK--GQKGAPAKEEDIELDAKGDPGLPGAPGPQGLPGPPGFPGPVGPPGPPGFFGFPG 207 Query: 946 PLLQQGVGMRFEGPHGQSVAGLRFEGQHNQLGGNLRFEGPHGQPG-VGIRFEGPLVQQGG 1004 + +G +G G+ V G H G GP G PG V + GP Sbjct: 208 AMGPRGP----KGHMGERVIG------HKGERGVKGLTGPPGPPGTVIVTLTGP----DN 253 Query: 1005 GMRFEGPSVPGGGLRIEGPLGQGGPRFEGCHALRFDGQPGQPSLL--PRFDGLHGQPGPR 1062 +G G + GP G G E + + G PG P L P DG+ G PG Sbjct: 254 RTDLKGEKGDKGAMGEPGPPGPSGLPGESYGSEK--GAPGDPGLQGKPGKDGVPGFPGSE 311 Query: 1063 -FERTPGQPGPQRFDGPPGQQVQ---PRFDGVPQRFDGPQHQQASRFDIPLGLQGTRFDN 1118 + G PG DG GQ+ P F G + +D Q + P G +G R Sbjct: 312 GVKGNRGFPGLMGEDGIKGQKGDIGPPGFRGPTEYYDTYQEKGDEGTPGPPGPRGARGPQ 371 Query: 1119 HPS 1121 PS Sbjct: 372 GPS 374 Score = 74.3 bits (181), Expect = 8e-13 Identities = 108/356 (30%), Positives = 134/356 (37%), Gaps = 81/356 (22%) Query: 793 GSPGQMGGGGPLRFEGPQGQLGGGCPLRFEGPPGPVGTPLRFEGPIGQAGGGGFRFEGSP 852 G PG G G F GP+G G P F G PG G+ +G G +G G F GSP Sbjct: 52 GFPGPPGSPGQKGFTGPEGLPGPQGPKGFPGLPGLTGS----KGVRGISGLPG--FSGSP 105 Query: 853 GLRFEGSPGGLRFEGPGGQPVGGLRFEGHRGQP--VGGLRFEGPHGQPVGGLRFDNPRGQ 910 GL G+PG G G P G +G +G P G L + G G GL+ +G Sbjct: 106 GL--PGTPGNTGPYGLVGVP-GCSGSKGEQGFPGLPGTLGYPGIPG--AAGLK--GQKGA 158 Query: 911 PV----------GGLRFEGGHGPSG--AAIRFDGPHGQPG--GGIRFEGPLLQQG----- 951 P G G GP G F GP G PG G F G + +G Sbjct: 159 PAKEEDIELDAKGDPGLPGAPGPQGLPGPPGFPGPVGPPGPPGFFGFPGAMGPRGPKGHM 218 Query: 952 ----VGMRFE----------GPHGQSVAGLRFEGQHNQLGGNLRFEGPHGQPGVGIRFEG 997 +G + E GP G + L L G +G G+PG G Sbjct: 219 GERVIGHKGERGVKGLTGPPGPPGTVIVTLTGPDNRTDLKGEKGDKGAMGEPGP----PG 274 Query: 998 P--LVQQGGGMRFEGPSVPGGGLRIEGPLGQGG-PRFEGCHALRFDGQPGQPSLLPRFDG 1054 P L + G P PG ++G G+ G P F G ++ G G P L+ DG Sbjct: 275 PSGLPGESYGSEKGAPGDPG----LQGKPGKDGVPGFPGSEGVK--GNRGFPGLMGE-DG 327 Query: 1055 LHGQPG----PRF---------------ERTPGQPGPQRFDGPPGQQVQPRFDGVP 1091 + GQ G P F E TPG PGP+ GP G P G P Sbjct: 328 IKGQKGDIGPPGFRGPTEYYDTYQEKGDEGTPGPPGPRGARGPQGPSGPPGVPGSP 383 Score = 72.0 bits (175), Expect = 4e-12 Identities = 110/342 (32%), Positives = 124/342 (36%), Gaps = 64/342 (18%) Query: 777 SPRIDGPPTPASLRFD-----GSPGQMGGGGPLRFEGPQGQLG---GGCPLRFEGPPGPV 828 SP GPP R G PG +G G +GP+G+ G CP GPPG Sbjct: 431 SPGPPGPPGDIVFRKGPPGDHGLPGYLGSPGIPGVDGPKGEPGLLCTQCPY-IPGPPGLP 489 Query: 829 GTP--LRFEGPIGQAGGGGFRFEGSPGLRFEGSPGGLRFEG----PGGQPVGGLRFE-GH 881 G P +G G+ G G + GSPG SPG G PG Q GL+ E G Sbjct: 490 GLPGLHGVKGIPGRQGAAGLK--GSPG-----SPGNTGLPGFPGFPGAQGDPGLKGEKGE 542 Query: 882 RGQPVGGLRFEGP---HGQPVGGLRFDNPRGQP-VGGLRFEGGHGPSGAAIRFDGPHGQP 937 QP G + G GQP G D G P V GL G GP G P Sbjct: 543 TLQPEGQVGVPGDPGLRGQP-GRKGLDGIPGTPGVKGLPGPKGELALSGEKGDQGPPGDP 601 Query: 938 G--GGIRFEGPLLQQGVGMRFEGPHGQSVAGLRFEGQHNQLGGNLRFEGPHGQPGVGIRF 995 G G GP G G P G+ L G G G PG Sbjct: 602 GSPGSPGPAGPAGPPGYG-----PQGEP-----------GLQGTQGVPGAPGPPGEA--- 642 Query: 996 EGPLVQQGGGMRFEGPSVPGGGLRIEGPLGQGGPRFEGCHALRFDGQPGQPSLLPRFDGL 1055 GP + GP P G GP QG P G +L G PG LP DG Sbjct: 643 -GPRGELSVSTPVPGPPGPPGPPGHPGP--QGPPGIPG--SLGKCGDPG----LPGPDGE 693 Query: 1056 HGQPGPRFERTPGQPGPQRFDGP------PGQQVQPRFDGVP 1091 G PG F PG G Q F G PG+ +P G P Sbjct: 694 PGIPGIGFPGPPGPKGDQGFPGTKGSLGCPGKMGEPGLPGKP 735 Score = 69.7 bits (169), Expect = 2e-11 Identities = 103/327 (31%), Positives = 122/327 (37%), Gaps = 50/327 (15%) Query: 783 PPTPASLRFDGSPGQMG----GGGPLRFEGPQGQLGGGCPLRFEGPPGPVGTP--LRFEG 836 P P +L + G PG G G P + E + G L G PGP G P F G Sbjct: 135 PGLPGTLGYPGIPGAAGLKGQKGAPAKEEDIELDAKGDPGL--PGAPGPQGLPGPPGFPG 192 Query: 837 PIGQAGGGGFRFEGSPGLRFEGSPGGLRFEGPGGQPVGGLRFEGHRGQP-VGGLRFE-GP 894 P+G G GF G PG + GP G G R GH+G+ V GL GP Sbjct: 193 PVGPPGPPGFF----------GFPGAMGPRGPKGHM--GERVIGHKGERGVKGLTGPPGP 240 Query: 895 HGQPVGGLRFDNPRGQPVGGLRFEGGHGPSGAAIRFDGPHGQPGGGIRFE-----GPLLQ 949 G + L + R G +G G G GP G PG E P LQ Sbjct: 241 PGTVIVTLTGPDNRTDLKGEKGDKGAMGEPGPP----GPSGLPGESYGSEKGAPGDPGLQ 296 Query: 950 QGVGMRFEG----PHGQSVAGLR-FEGQHNQLGGNLRFEGPHGQPGVGIRFEGPL----- 999 G +G P + V G R F G + G + +G G PG F GP Sbjct: 297 GKPGK--DGVPGFPGSEGVKGNRGFPGLMGEDGIKGQ-KGDIGPPG----FRGPTEYYDT 349 Query: 1000 VQQGGGMRFEGPSVPGGGLRIEGPLGQGG-PRFEGCHALRFDGQPGQPSLLPRFDGLHGQ 1058 Q+ G GP P G +GP G G P G G PG P L G G+ Sbjct: 350 YQEKGDEGTPGPPGPRGARGPQGPSGPPGVPGSPGSSRPGLRGAPGWPGLKGS-KGERGR 408 Query: 1059 PGPRFERTPGQPGPQRFDGPPGQQVQP 1085 PG TPG PG G PG P Sbjct: 409 PGKDAMGTPGSPGCAGSPGLPGSPGPP 435 Score = 68.6 bits (166), Expect = 5e-11 Identities = 141/501 (28%), Positives = 176/501 (35%), Gaps = 109/501 (21%) Query: 775 KLSPRIDGPPTPASLRFDGSPGQMGGGGPLRFEGPQGQLGGGCPLRFEGPPGPVGTPLRF 834 K P + P P + F G G G G + G G G +GP G G P Sbjct: 741 KGEPAVAMPGGPGTPGFPGERGNSGEHGEIGLPGLPGLPGTPGNEGLDGPRGDPGQP--- 797 Query: 835 EGPIGQAGGGGFRFEGS------PGLR-FEGSPGGLRFEGPGGQP-VGGL---RFEGHRG 883 GP G+ G G EG PGL +G G GP G P + GL F G G Sbjct: 798 -GPPGEQGPPGRCIEGPRGAQGLPGLNGLKGQQGRRGKTGPKGDPGIPGLDRSGFPGETG 856 Query: 884 QP-VGGLRFE-GPHGQP--VGGLRFDNPRGQP--VGGLRFEGGHGPSGAAIRFDGPHGQP 937 P + G + E GP GQ G P G+ +G + F G GP GP G P Sbjct: 857 SPGIPGHQGEMGPLGQRGYPGNPGILGPPGEDGVIGMMGFPGAIGP-------PGPPGNP 909 Query: 938 G-----GGIRFEGPLLQQGV-GMRFE----GPHGQS----VAGLRFEGQHNQLGGNLRFE 983 G G G Q+G G + E G G S V G + E GN + Sbjct: 910 GTPGQRGSPGIPGVKGQRGTPGAKGEQGDKGNPGPSEISHVIGDKGEPGLKGFAGNPGEK 969 Query: 984 GPHGQPGV-GIR----FEGPLVQQG--GGMRFEG-PSVPG--------GGLRIEGPLGQ- 1026 G G PG+ G++ GP G G + G P PG G + + G G+ Sbjct: 970 GNRGVPGMPGLKGLKGLPGPAGPPGPRGDLGSTGNPGEPGLRGIPGSMGNMGMPGSKGKR 1029 Query: 1027 ---------GGPRFEGCHALRFD------------------GQPGQPSLLPRFDGLHGQP 1059 G P G H L+ D G PG P + + G GQP Sbjct: 1030 GTLGFPGRAGRPGLPGIHGLQGDKGEPGYSEGTRPGPPGPTGDPGLPGDMGK-KGEMGQP 1088 Query: 1060 GPRF-------ERTPGQPGPQRFDGPPGQQVQPRFDGV-----PQRFDGPQHQQA-SRFD 1106 GP E PG PG G PG F G+ P GP Sbjct: 1089 GPPGHLGPAGPEGAPGSPGSPGLPGKPGPHGDLGFKGIKGLLGPPGIRGPPGLPGFPGSP 1148 Query: 1107 IPLGLQGTR-FDNHPSQRLESVSFNQTGPYNDPPGNAFNAPSQGLQFQRHEQIFDSPQG- 1164 P+G++G + D P E +TG PPG N +QG + R F G Sbjct: 1149 GPMGIRGDQGRDGIPGPAGEK---GETGLLRAPPGPRGNPGAQGAKGDRGAPGFPGLPGR 1205 Query: 1165 ---PNFNGPHGP-GNQSFSNP 1181 GP GP G + F P Sbjct: 1206 KGAMGDAGPRGPTGIEGFPGP 1226 Score = 62.4 bits (150), Expect = 3e-09 Identities = 65/190 (34%), Positives = 77/190 (40%), Gaps = 28/190 (14%) Query: 755 PSRPSVARDGPTKMIFEGPNKLSPRIDGPPTPAS---LRFDGSPGQMGGGGPLRFEGPQG 811 P P G T ++ SP GPP P + G G MG GP +GP G Sbjct: 1227 PGLPGAIIPGQTGNRGPPGSRGSPGAPGPPGPPGSHVIGIKGDKGSMGHPGP---KGPPG 1283 Query: 812 QLGGGCPLRFEGPPGPVGTPLRFEGPIGQAGGGGFRFEGSPGLRFE-GSPGGLRFEGPGG 870 G P G PG G P GP G G F+G PG++ E G+PG L GP G Sbjct: 1284 TAGDMGPPGRLGAPGTPGLP----GPRGDPG-----FQGFPGVKGEKGNPGFLGSIGPPG 1334 Query: 871 QPVGGLRFEGHRGQPVGGLRFEGPHGQPVGGLRFDNPRGQPVGGLRFEGGHGPSGAAIRF 930 P+G G RG P G L+ G P P G P G +G GP G Sbjct: 1335 -PIGPKGPPGVRGDP-GTLKIISLPGSP-------GPPGTP-GEPGMQGEPGPPGPPGNL 1384 Query: 931 D--GPHGQPG 938 GP G+PG Sbjct: 1385 GPCGPRGKPG 1394 Score = 38.9 bits (89), Expect = 0.039 Identities = 35/97 (36%), Positives = 37/97 (38%), Gaps = 18/97 (18%) Query: 754 GPSRPSVARDGP-TKMIFEGPNKLSPRIDGPPTPASLRFDGSPGQMGGGGPLRFEGPQGQ 812 GP P R P T I P P P TP G PG G GP GP G Sbjct: 1337 GPKGPPGVRGDPGTLKIISLPGSPGP----PGTP------GEPGMQGEPGP---PGPPGN 1383 Query: 813 LGGGCPLRFEGPPGPVGTPLRFEGPIGQAGGGGFRFE 849 LG P G G GTP GP G+ G G + E Sbjct: 1384 LGPCGPRGKPGKDGKPGTP----GPAGEKGNKGSKGE 1416 Database: hs.faa Posted date: Aug 4, 2009 4:42 PM Number of letters in database: 18,247,518 Number of sequences in database: 37,866 Lambda K H 0.312 0.132 0.390 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 73,313,413 Number of Sequences: 37866 Number of extensions: 4505866 Number of successful extensions: 33173 Number of sequences better than 10.0: 30 Number of HSP's better than 10.0 without gapping: 234 Number of HSP's successfully gapped in prelim test: 1149 Number of HSP's that attempted gapping in prelim test: 15740 Number of HSP's gapped (non-prelim): 6715 length of query: 1555 length of database: 18,247,518 effective HSP length: 116 effective length of query: 1439 effective length of database: 13,855,062 effective search space: 19937434218 effective search space used: 19937434218 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.8 bits) S2: 69 (31.2 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.