LOC100293871 23353

Name: LOC100293871	Sequence: fasta or formatted (171aa)		NCBI GI: 239757757
Description: PREDICTED: similar to PRO2325		Not currently referenced in the text
Composition: Amino acid Percentage Count Longest homopolymer A alanine 11.1 19 2 C cysteine 1.8 3 1 D aspartate 7.0 12 1 E glutamate 3.5 6 2 F phenylalanine 1.8 3 1 G glycine 17.0 29 2 H histidine 2.3 4 1 I isoleucine 1.2 2 1 K lysine 2.3 4 1 L leucine 11.1 19 2 M methionine 0.6 1 1 N asparagine 1.2 2 1 P proline 9.4 16 2 Q glutamine 5.3 9 2 R arginine 6.4 11 1 S serine 8.8 15 2 T threonine 0.6 1 1 V valine 7.6 13 2 W tryptophan 1.2 2 1 Y tyrosine 0.0 0 0			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 PREDICTED: similar to PRO2325 TAF4 0.040 TBP-associated factor 4 COL4A3 0.031 alpha 3 type IV collagen isoform 5 precursor COL4A3 0.031 alpha 3 type IV collagen isoform 4 precursor COL4A3 0.031 alpha 3 type IV collagen isoform 2 precursor COL4A3 0.031 alpha 3 type IV collagen isoform 1 precursor COL11A1 0.028 alpha 1 type XI collagen isoform B preproprotein [Ho... COL11A1 0.028 alpha 1 type XI collagen isoform C preproprotein [Ho... COL11A1 0.028 alpha 1 type XI collagen isoform A preproprotein [Ho... LOC284988 0.028 PREDICTED: hypothetical protein COL7A1 0.028 alpha 1 type VII collagen precursor COL2A1 0.021 collagen, type II, alpha 1 isoform 1 precursor [Hom... COL2A1 0.021 collagen, type II, alpha 1 isoform 2 precursor [Hom... COL9A3 0.021 alpha 3 type IX collagen COL11A2 0.021 collagen, type XI, alpha 2 isoform 2 preproprotein ... COL11A2 0.021 collagen, type XI, alpha 2 isoform 3 preproprotein ... COL11A2 0.021 collagen, type XI, alpha 2 isoform 1 preproprotein ... POU3F3 0.021 POU class 3 homeobox 3 COL18A1 0.018 alpha 1 type XVIII collagen isoform 3 precursor [Ho... COL18A1 0.018 alpha 1 type XVIII collagen isoform 2 precursor [Ho... COL18A1 0.018 alpha 1 type XVIII collagen isoform 1 precursor [Ho... COL13A1 0.018 alpha 1 type XIII collagen isoform 20 COL13A1 0.018 alpha 1 type XIII collagen isoform 19 COL13A1 0.018 alpha 1 type XIII collagen isoform 18 COL13A1 0.018 alpha 1 type XIII collagen isoform 17 COL13A1 0.018 alpha 1 type XIII collagen isoform 16 COL13A1 0.018 alpha 1 type XIII collagen isoform 15 COL13A1 0.018 alpha 1 type XIII collagen isoform 14 COL13A1 0.018 alpha 1 type XIII collagen isoform 13 COL13A1 0.018 alpha 1 type XIII collagen isoform 12 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.