LOC100292273 23340

Name: LOC100292273	Sequence: fasta or formatted (133aa)		NCBI GI: 239757727
Description: PREDICTED: similar to hCG2013141		Not currently referenced in the text
Composition: Amino acid Percentage Count Longest homopolymer A alanine 14.3 19 2 C cysteine 6.0 8 1 D aspartate 0.8 1 1 E glutamate 5.3 7 2 F phenylalanine 0.0 0 0 G glycine 15.0 20 2 H histidine 3.0 4 1 I isoleucine 0.0 0 0 K lysine 0.0 0 0 L leucine 9.8 13 1 M methionine 1.5 2 1 N asparagine 0.0 0 0 P proline 10.5 14 1 Q glutamine 2.3 3 1 R arginine 6.8 9 1 S serine 11.3 15 2 T threonine 6.0 8 2 V valine 3.8 5 1 W tryptophan 3.0 4 1 Y tyrosine 0.8 1 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 PREDICTED: similar to hCG2013141 LOC100291054 1.000 PREDICTED: hypothetical protein XP_002348134 LOC100293205 0.069 PREDICTED: hypothetical protein LOC100289336 0.069 PREDICTED: hypothetical protein LOC100289336 0.069 PREDICTED: hypothetical protein XP_002342623 COL4A4 0.046 alpha 4 type IV collagen precursor COL5A2 0.042 alpha 2 type V collagen preproprotein LOC100287514 0.042 PREDICTED: hypothetical protein XP_002343754 C11orf61 0.042 hypothetical protein LOC79684 COL8A1 0.042 alpha 1 type VIII collagen precursor COL8A1 0.042 alpha 1 type VIII collagen precursor LOC100294413 0.038 PREDICTED: hypothetical protein COL4A1 0.038 alpha 1 type IV collagen preproprotein COL7A1 0.034 alpha 1 type VII collagen precursor RP1L1 0.034 retinitis pigmentosa 1-like 1 ALPK3 0.034 alpha-kinase 3 COL24A1 0.034 collagen, type XXIV, alpha 1 COL1A1 0.031 alpha 1 type I collagen preproprotein ARMCX2 0.031 ALEX2 protein ARMCX2 0.031 ALEX2 protein COL9A1 0.031 alpha 1 type IX collagen isoform 1 precursor COL10A1 0.031 type X collagen alpha 1 precursor COL27A1 0.031 collagen, type XXVII, alpha 1 COL9A1 0.031 alpha 1 type IX collagen isoform 2 precursor COL1A2 0.031 alpha 2 type I collagen SPNS2 0.027 spinster homolog 2 COL2A1 0.027 collagen, type II, alpha 1 isoform 1 precursor [Hom... COL2A1 0.027 collagen, type II, alpha 1 isoform 2 precursor [Hom... COL5A1 0.027 alpha 1 type V collagen preproprotein COL8A2 0.027 collagen, type VIII, alpha 2 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.