Guide to the Human Genome
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Name: C11orf61 Sequence: fasta or formatted (507aa) NCBI GI: 189571647
Description:

hypothetical protein LOC79684

Not currently referenced in the text

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.1         41           8
 C cysteine            1.8          9           1
 D aspartate           3.4         17           1
 E glutamate           8.5         43           2
 F phenylalanine       2.8         14           1
 G glycine             9.7         49           6
 H histidine           1.6          8           1
 I isoleucine          6.1         31           2
 K lysine              4.9         25           1
 L leucine             9.1         46           2
 M methionine          2.0         10           1
 N asparagine          3.4         17           2
 P proline             6.3         32           1
 Q glutamine           4.3         22           2
 R arginine            4.9         25           1
 S serine              9.7         49           3
 T threonine           3.7         19           1
 V valine              4.5         23           2
 W tryptophan          1.8          9           1
 Y tyrosine            3.6         18           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   hypothetical protein LOC79684 
OSBP                  0.022   oxysterol binding protein 
POU4F2                0.021   Brn3b POU domain transcription factor 
PRR12                 0.020   proline rich 12 
GSK3A                 0.019   glycogen synthase kinase 3 alpha 
DGKI                  0.019   diacylglycerol kinase, iota 
CACNG8                0.019   voltage-dependent calcium channel gamma-8 subunit [H...
KRT9                  0.018   keratin 9 
ZIC2                  0.018   zinc finger protein of the cerebellum 2 
MAF                   0.018   v-maf musculoaponeurotic fibrosarcoma oncogene homol...
MAF                   0.018   v-maf musculoaponeurotic fibrosarcoma oncogene homolo...
KLF16                 0.017   BTE-binding protein 4 
CEND1                 0.017   cell cycle exit and neuronal differentiation 1 [Homo...
ARID1B                0.017   AT rich interactive domain 1B (SWI1-like) isoform 2 ...
ARID1B                0.017   AT rich interactive domain 1B (SWI1-like) isoform 1 ...
ARID1B                0.017   AT rich interactive domain 1B (SWI1-like) isoform 3 ...
EOMES                 0.017   eomesodermin 
ZSWIM6                0.017   zinc finger, SWIM-type containing 6 
HECA                  0.016   headcase 
DACH1                 0.016   dachshund homolog 1 isoform b 
DACH1                 0.016   dachshund homolog 1 isoform a 
DACH1                 0.016   dachshund homolog 1 isoform c 
GATA6                 0.015   GATA binding protein 6 
OSBPL10               0.015   oxysterol-binding protein-like protein 10 
GGN                   0.015   gametogenetin 
ELN                   0.015   elastin isoform b precursor 
LOC100293975          0.015   PREDICTED: hypothetical protein 
LOC729989             0.015   PREDICTED: hypothetical protein 
LOC100290812          0.015   PREDICTED: hypothetical protein XP_002347678 
LOC729989             0.015   PREDICTED: hypothetical protein 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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