Guide to the Human Genome
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Name: ALPK3 Sequence: fasta or formatted (1907aa) NCBI GI: 115511036
Description:

alpha-kinase 3

Referenced in:

Additional Serine / Threonine Protein Kinases

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.4        180           4
 C cysteine            2.1         40           1
 D aspartate           3.4         64           2
 E glutamate           8.0        153           3
 F phenylalanine       1.6         31           2
 G glycine            11.6        222           3
 H histidine           1.3         25           1
 I isoleucine          2.3         44           2
 K lysine              4.7         90           5
 L leucine             7.6        144           5
 M methionine          1.4         26           2
 N asparagine          1.4         26           2
 P proline             9.4        180           2
 Q glutamine           6.1        117           3
 R arginine            6.8        130           3
 S serine              9.1        174           4
 T threonine           6.6        126           3
 V valine              4.7         90           2
 W tryptophan          1.0         19           1
 Y tyrosine            1.4         26           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   alpha-kinase 3 
ALPK2                 0.080   heart alpha-kinase 
SPEG                  0.014   SPEG complex locus 
RP1L1                 0.012   retinitis pigmentosa 1-like 1 
MYLK                  0.011   myosin light chain kinase isoform 8 
MYLK                  0.011   myosin light chain kinase isoform 3A 
MYLK                  0.011   myosin light chain kinase isoform 1 
MYLK                  0.011   myosin light chain kinase isoform 3B 
MYLK                  0.011   myosin light chain kinase isoform 2 
MYOM1                 0.011   myomesin 1 isoform b 
MYOM1                 0.011   myomesin 1 isoform a 
SRRM2                 0.011   splicing coactivator subunit SRm300 
MYLK                  0.011   myosin light chain kinase isoform 7 
COL7A1                0.010   alpha 1 type VII collagen precursor 
MYOM3                 0.010   myomesin family, member 3 
TCOF1                 0.010   Treacher Collins-Franceschetti syndrome 1 isoform d...
TCOF1                 0.010   Treacher Collins-Franceschetti syndrome 1 isoform b ...
TCOF1                 0.010   Treacher Collins-Franceschetti syndrome 1 isoform a ...
TCOF1                 0.010   Treacher Collins-Franceschetti syndrome 1 isoform f...
COL5A2                0.009   alpha 2 type V collagen preproprotein 
TTN                   0.009   titin isoform novex-3 
TTN                   0.009   titin isoform N2-A 
TTN                   0.009   titin isoform novex-2 
TTN                   0.009   titin isoform novex-1 
TTN                   0.009   titin isoform N2-B 
MYPN                  0.009   myopalladin 
PRG4                  0.009   proteoglycan 4 isoform D 
PRG4                  0.009   proteoglycan 4 isoform C 
OBSCN                 0.009   obscurin, cytoskeletal calmodulin and titin-interact...
OBSCN                 0.009   obscurin, cytoskeletal calmodulin and titin-interac...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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