Guide to the Human Genome
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Name: ARMCX2 Sequence: fasta or formatted (632aa) NCBI GI: 7662162
Description:

ALEX2 protein

Referenced in:

Additional Interaction Domain Families

Other entries for this name:
alt mRNA [632aa] ALEX2 protein
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            15.5         98           7
 C cysteine            0.8          5           1
 D aspartate           3.8         24           2
 E glutamate           6.5         41           2
 F phenylalanine       2.5         16           2
 G glycine             9.7         61           3
 H histidine           0.8          5           2
 I isoleucine          4.0         25           2
 K lysine              6.2         39           2
 L leucine             6.6         42           2
 M methionine          2.2         14           1
 N asparagine          4.6         29           2
 P proline             6.5         41           3
 Q glutamine           2.8         18           2
 R arginine            4.9         31           2
 S serine              6.6         42           2
 T threonine           6.0         38           2
 V valine              7.6         48           2
 W tryptophan          0.3          2           1
 Y tyrosine            2.1         13           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   ALEX2 protein 
ARMCX2                1.000   ALEX2 protein 
ARMCX1                0.217   armadillo repeat containing, X-linked 1 
ARMCX3                0.199   armadillo repeat containing, X-linked 3 
ARMCX3                0.199   armadillo repeat containing, X-linked 3 
ARMCX3                0.199   armadillo repeat containing, X-linked 3 
ARMC10                0.175   SVH protein isoform b 
ARMC10                0.174   SVH protein isoform a 
LOC100292655          0.148   PREDICTED: similar to armadillo repeat containing, ...
LOC389137             0.147   PREDICTED: similar to SVH protein isoform 1 
ARMC10                0.146   SVH protein isoform e 
LOC389137             0.146   PREDICTED: similar to SVH protein isoform 1 
LOC389137             0.146   PREDICTED: similar to SVH protein isoform 2 
LOC389137             0.103   PREDICTED: similar to SVH protein isoform 2 
LOC389137             0.103   PREDICTED: similar to SVH protein isoform 2 
LOC389137             0.103   PREDICTED: similar to SVH protein isoform 1 
ARMCX5                0.074   armadillo repeat containing, X-linked 5 
ARMC10                0.072   SVH protein isoform d 
GPRASP1               0.071   G protein-coupled receptor associated sorting prote...
GPRASP1               0.071   G protein-coupled receptor associated sorting prote...
GPRASP1               0.071   G protein-coupled receptor associated sorting prote...
ARMC10                0.070   SVH protein isoform c 
ARMCX6                0.067   armadillo repeat containing, X-linked 6 
ARMCX6                0.067   armadillo repeat containing, X-linked 6 
GPRASP2               0.060   G protein-coupled receptor associated sorting protei...
GPRASP2               0.060   G protein-coupled receptor associated sorting protei...
ARMC10                0.060   SVH protein isoform f 
BHLHB9                0.058   basic helix-loop-helix domain containing, class B, ...
BHLHB9                0.058   basic helix-loop-helix domain containing, class B, ...
BHLHB9                0.058   basic helix-loop-helix domain containing, class B, ...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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