| Name: LOC100293107 | Sequence: fasta or formatted (576aa) | NCBI GI: 239756892 | |
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Description: PREDICTED: hypothetical protein
| Not currently referenced in the text | ||
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Composition:
Amino acid Percentage Count Longest homopolymer A alanine 10.2 59 2 C cysteine 1.9 11 2 D aspartate 2.6 15 2 E glutamate 4.5 26 2 F phenylalanine 1.7 10 1 G glycine 11.8 68 3 H histidine 4.3 25 2 I isoleucine 1.6 9 1 K lysine 3.8 22 2 L leucine 10.4 60 3 M methionine 1.2 7 1 N asparagine 1.7 10 1 P proline 10.9 63 2 Q glutamine 3.5 20 1 R arginine 8.7 50 5 S serine 9.5 55 2 T threonine 5.4 31 3 V valine 3.1 18 2 W tryptophan 1.4 8 1 Y tyrosine 1.6 9 1 |
Comparative genomics:
Search single species RefSeq proteins at NCBI
Search summary 
Figure data | ||
Related human proteins:Protein Relative score Description Self-match 1.000 PREDICTED: hypothetical protein LOC100290679 0.652 PREDICTED: hypothetical protein XP_002347834 LOC100288571 0.652 PREDICTED: hypothetical protein XP_002343612 COL1A2 0.020 alpha 2 type I collagen TCF3 0.020 transcription factor 3 isoform E47 TCF3 0.019 transcription factor 3 isoform E12 COL5A1 0.018 alpha 1 type V collagen preproprotein LOC100289763 0.018 PREDICTED: hypothetical protein XP_002347867 LOC100289681 0.018 PREDICTED: hypothetical protein XP_002343623 LOC100292172 0.018 PREDICTED: hypothetical protein COL1A1 0.017 alpha 1 type I collagen preproprotein TBX2 0.017 T-box 2 COL3A1 0.017 collagen type III alpha 1 preproprotein COL2A1 0.016 collagen, type II, alpha 1 isoform 1 precursor [Hom... COL2A1 0.016 collagen, type II, alpha 1 isoform 2 precursor [Hom... EGLN1 0.016 egl nine homolog 1 LOC100292370 0.015 PREDICTED: hypothetical protein FLG 0.015 filaggrin COL5A2 0.015 alpha 2 type V collagen preproprotein COL22A1 0.015 collagen, type XXII, alpha 1 FLJ22184 0.015 PREDICTED: hypothetical protein FLJ22184 FLJ22184 0.015 PREDICTED: hypothetical protein LOC80164 SRRM1 0.015 serine/arginine repetitive matrix 1 LOC100290812 0.015 PREDICTED: hypothetical protein XP_002347678 LOC100288205 0.015 PREDICTED: hypothetical protein XP_002343496 ITPKC 0.015 inositol 1,4,5-trisphosphate 3-kinase C FLJ10357 0.015 hypothetical protein LOC55701 LOC100131774 0.014 PREDICTED: hypothetical protein COL11A2 0.014 collagen, type XI, alpha 2 isoform 2 preproprotein ... COL11A2 0.014 collagen, type XI, alpha 2 isoform 3 preproprotein ...Human BLASTP results (used to prepare the table) | |||
Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.
See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.
