Guide to the Human Genome
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Name: LOC100289763 Sequence: fasta or formatted (315aa) NCBI GI: 239751449
Description:

PREDICTED: hypothetical protein XP_002347867

Not currently referenced in the text

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            15.9         50           3
 C cysteine            1.6          5           1
 D aspartate           1.9          6           1
 E glutamate           5.1         16           2
 F phenylalanine       1.9          6           1
 G glycine            14.3         45           2
 H histidine           3.5         11           1
 I isoleucine          1.3          4           1
 K lysine              1.0          3           1
 L leucine             7.3         23           2
 M methionine          1.0          3           2
 N asparagine          1.0          3           1
 P proline            12.7         40           2
 Q glutamine           3.2         10           2
 R arginine           11.1         35           3
 S serine              8.6         27           2
 T threonine           2.5          8           2
 V valine              4.1         13           1
 W tryptophan          1.9          6           2
 Y tyrosine            0.3          1           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   PREDICTED: hypothetical protein XP_002347867 
LOC100289681          0.997   PREDICTED: hypothetical protein XP_002343623 
LOC100292172          0.929   PREDICTED: hypothetical protein 
LOC645321             0.046   PREDICTED: hypothetical protein 
LOC645321             0.046   PREDICTED: hypothetical protein 
COL1A2                0.040   alpha 2 type I collagen 
COL1A1                0.040   alpha 1 type I collagen preproprotein 
COL7A1                0.040   alpha 1 type VII collagen precursor 
LOC100129852          0.038   PREDICTED: hypothetical protein 
LOC100129852          0.038   PREDICTED: hypothetical protein 
LOC100129852          0.038   PREDICTED: hypothetical protein 
LOC100293375          0.038   PREDICTED: hypothetical protein 
LOC100291490          0.038   PREDICTED: hypothetical protein XP_002347018 
LOC100130360          0.038   PREDICTED: hypothetical protein 
LOC100287037          0.038   PREDICTED: hypothetical protein XP_002342879 
COL3A1                0.037   collagen type III alpha 1 preproprotein 
LOC729370             0.037   PREDICTED: hypothetical protein 
COL2A1                0.035   collagen, type II, alpha 1 isoform 1 precursor [Hom...
COL2A1                0.035   collagen, type II, alpha 1 isoform 2 precursor [Hom...
CASKIN2               0.035   cask-interacting protein 2 isoform b 
CASKIN2               0.035   cask-interacting protein 2 isoform a 
LOC100293107          0.033   PREDICTED: hypothetical protein 
LOC100290679          0.033   PREDICTED: hypothetical protein XP_002347834 
LOC100288571          0.033   PREDICTED: hypothetical protein XP_002343612 
CASKIN1               0.033   CASK interacting protein 1 
LOC100293371          0.033   PREDICTED: hypothetical protein 
ALPK3                 0.032   alpha-kinase 3 
LOC100293055          0.032   PREDICTED: similar to COL22A1 protein 
LOC100291624          0.032   PREDICTED: hypothetical protein XP_002345876 
LOC100289712          0.032   PREDICTED: hypothetical protein XP_002346761 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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