Guide to the Human Genome
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Name: ITPKC Sequence: fasta or formatted (683aa) NCBI GI: 18643383
Description:

inositol 1,4,5-trisphosphate 3-kinase C

Referenced in:

Inositol Pathways

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.6         45           3
 C cysteine            1.9         13           1
 D aspartate           5.6         38           2
 E glutamate           9.4         64           3
 F phenylalanine       2.8         19           2
 G glycine            10.2         70           4
 H histidine           2.6         18           1
 I isoleucine          1.8         12           2
 K lysine              4.5         31           2
 L leucine             8.1         55           2
 M methionine          1.9         13           1
 N asparagine          1.3          9           1
 P proline             8.8         60           2
 Q glutamine           5.9         40           2
 R arginine            5.6         38           3
 S serine              7.3         50           3
 T threonine           7.2         49           2
 V valine              4.1         28           2
 W tryptophan          2.8         19           1
 Y tyrosine            1.8         12           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   inositol 1,4,5-trisphosphate 3-kinase C 
ITPKB                 0.277   1D-myo-inositol-trisphosphate 3-kinase B 
ITPKA                 0.257   1D-myo-inositol-trisphosphate 3-kinase A 
RAB11FIP3             0.013   rab11-family interacting protein 3 isoform 1 
LOC100293107          0.012   PREDICTED: hypothetical protein 
LOC100290679          0.012   PREDICTED: hypothetical protein XP_002347834 
LOC100288571          0.012   PREDICTED: hypothetical protein XP_002343612 
COL4A5                0.012   type IV collagen alpha 5 isoform 2 precursor 
LOC100133915          0.011   PREDICTED: hypothetical protein 
COL7A1                0.011   alpha 1 type VII collagen precursor 
BSN                   0.011   bassoon protein 
BAT2                  0.011   HLA-B associated transcript-2 
LPIN3                 0.011   lipin 3 
FNBP4                 0.011   formin binding protein 4 
COL23A1               0.010   collagen, type XXIII, alpha 1 
GPR153                0.010   G protein-coupled receptor 153 
LOC284988             0.010   PREDICTED: hypothetical protein 
IER5                  0.010   immediate early response 5 
AVEN                  0.010   cell death regulator aven 
COL4A5                0.010   type IV collagen alpha 5 isoform 3 precursor 
SYN1                  0.010   synapsin I isoform Ib 
BASP1                 0.009   brain abundant, membrane attached signal protein 1 [...
FLJ22184              0.009   PREDICTED: hypothetical protein FLJ22184 
FLJ22184              0.009   PREDICTED: hypothetical protein FLJ22184 
FLJ22184              0.009   PREDICTED: hypothetical protein LOC80164 
PABPN1                0.009   poly(A) binding protein, nuclear 1 
MUPCDH                0.009   mucin and cadherin-like isoform 1 
CCDC86                0.008   coiled-coil domain containing 86 
TNRC6C                0.008   trinucleotide repeat containing 6C isoform 1 
TMC5                  0.008   transmembrane channel-like 5 isoform b 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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