TCF3 12488

Name: TCF3	Sequence: fasta or formatted (651aa)		NCBI GI: 209915594
Description: transcription factor 3 isoform E47		Referenced in: Muscle Stem Cells and Early Development Helix-Loop-Helix Transcription Factors
Other entries for this name: alt prot [654aa] transcription factor 3 isoform E12
Composition: Amino acid Percentage Count Longest homopolymer A alanine 9.1 59 3 C cysteine 0.3 2 1 D aspartate 4.6 30 1 E glutamate 5.5 36 3 F phenylalanine 2.5 16 1 G glycine 13.5 88 3 H histidine 3.5 23 1 I isoleucine 1.1 7 1 K lysine 3.4 22 2 L leucine 9.2 60 2 M methionine 2.3 15 2 N asparagine 2.2 14 2 P proline 8.6 56 2 Q glutamine 3.4 22 2 R arginine 5.4 35 3 S serine 14.6 95 4 T threonine 4.5 29 2 V valine 3.8 25 2 W tryptophan 0.5 3 1 Y tyrosine 2.2 14 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 transcription factor 3 isoform E47 TCF3 0.967 transcription factor 3 isoform E12 TCF12 0.432 transcription factor 12 isoform b TCF12 0.432 transcription factor 12 isoform b TCF12 0.424 transcription factor 12 isoform a TCF12 0.424 transcription factor 12 isoform a TCF4 0.418 transcription factor 4 isoform a TCF4 0.416 transcription factor 4 isoform b TCF12 0.308 transcription factor 12 isoform c HRNR 0.028 hornerin COL1A1 0.026 alpha 1 type I collagen preproprotein COL3A1 0.026 collagen type III alpha 1 preproprotein COL2A1 0.026 collagen, type II, alpha 1 isoform 1 precursor [Hom... COL2A1 0.026 collagen, type II, alpha 1 isoform 2 precursor [Hom... COL5A2 0.025 alpha 2 type V collagen preproprotein COL13A1 0.025 alpha 1 type XIII collagen isoform 6 MUC12 0.024 PREDICTED: mucin 12 LOC100133915 0.023 PREDICTED: hypothetical protein LOC100293409 0.023 PREDICTED: similar to Mucin-19 LOC100291118 0.023 PREDICTED: hypothetical protein XP_002347351 COL4A6 0.023 type IV alpha 6 collagen isoform A precursor COL4A6 0.023 type IV alpha 6 collagen isoform B precursor IRS1 0.023 insulin receptor substrate 1 LOC100287737 0.023 PREDICTED: hypothetical protein XP_002343203 COL11A2 0.022 collagen, type XI, alpha 2 isoform 2 preproprotein ... COL11A2 0.022 collagen, type XI, alpha 2 isoform 3 preproprotein ... COL11A2 0.022 collagen, type XI, alpha 2 isoform 1 preproprotein ... MED1 0.021 mediator complex subunit 1 COL17A1 0.021 alpha 1 type XVII collagen COL4A3 0.020 alpha 3 type IV collagen isoform 4 precursor Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.