LOC100292172 23018

Name: LOC100292172	Sequence: fasta or formatted (294aa)		NCBI GI: 239756937
Description: PREDICTED: hypothetical protein		Not currently referenced in the text
Composition: Amino acid Percentage Count Longest homopolymer A alanine 16.7 49 3 C cysteine 1.7 5 1 D aspartate 2.0 6 1 E glutamate 5.1 15 2 F phenylalanine 2.0 6 1 G glycine 13.9 41 2 H histidine 3.1 9 1 I isoleucine 1.4 4 1 K lysine 0.7 2 1 L leucine 6.5 19 2 M methionine 1.0 3 2 N asparagine 1.0 3 1 P proline 13.6 40 2 Q glutamine 3.1 9 2 R arginine 11.6 34 3 S serine 8.8 26 2 T threonine 2.0 6 2 V valine 3.7 11 1 W tryptophan 2.0 6 2 Y tyrosine 0.0 0 0			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 PREDICTED: hypothetical protein LOC100289763 0.995 PREDICTED: hypothetical protein XP_002347867 LOC100289681 0.991 PREDICTED: hypothetical protein XP_002343623 LOC645321 0.049 PREDICTED: hypothetical protein LOC645321 0.049 PREDICTED: hypothetical protein COL7A1 0.048 alpha 1 type VII collagen precursor COL1A1 0.046 alpha 1 type I collagen preproprotein COL1A2 0.043 alpha 2 type I collagen TAF4 0.043 TBP-associated factor 4 LOC100129852 0.041 PREDICTED: hypothetical protein LOC100129852 0.041 PREDICTED: hypothetical protein LOC100129852 0.041 PREDICTED: hypothetical protein LOC100291490 0.041 PREDICTED: hypothetical protein XP_002347018 LOC100130360 0.041 PREDICTED: hypothetical protein LOC100287037 0.041 PREDICTED: hypothetical protein XP_002342879 COL3A1 0.039 collagen type III alpha 1 preproprotein LOC100293375 0.039 PREDICTED: hypothetical protein COL16A1 0.039 alpha 1 type XVI collagen precursor CASKIN2 0.039 cask-interacting protein 2 isoform b CASKIN2 0.039 cask-interacting protein 2 isoform a LOC729370 0.039 PREDICTED: hypothetical protein CASKIN1 0.036 CASK interacting protein 1 LOC100293107 0.036 PREDICTED: hypothetical protein LOC100293371 0.036 PREDICTED: hypothetical protein LOC100290679 0.036 PREDICTED: hypothetical protein XP_002347834 LOC100288571 0.036 PREDICTED: hypothetical protein XP_002343612 ALPK3 0.034 alpha-kinase 3 LOC100291624 0.034 PREDICTED: hypothetical protein XP_002345876 LOC100289712 0.034 PREDICTED: hypothetical protein XP_002346761 LOC100287455 0.034 PREDICTED: hypothetical protein XP_002342583 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.