LOC100293538 22692

Name: LOC100293538	Sequence: fasta or formatted (193aa)		NCBI GI: 239756163
Description: PREDICTED: hypothetical protein		Not currently referenced in the text
Composition: Amino acid Percentage Count Longest homopolymer A alanine 7.8 15 2 C cysteine 1.0 2 1 D aspartate 2.1 4 1 E glutamate 1.0 2 1 F phenylalanine 2.6 5 1 G glycine 9.8 19 2 H histidine 4.1 8 1 I isoleucine 1.6 3 1 K lysine 1.6 3 1 L leucine 7.8 15 2 M methionine 1.6 3 1 N asparagine 2.1 4 1 P proline 20.2 39 2 Q glutamine 3.6 7 1 R arginine 14.0 27 2 S serine 8.3 16 3 T threonine 5.2 10 1 V valine 5.2 10 1 W tryptophan 0.0 0 0 Y tyrosine 0.5 1 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 PREDICTED: hypothetical protein LOC100291263 1.000 PREDICTED: hypothetical protein XP_002347505 LOC100287521 1.000 PREDICTED: hypothetical protein XP_002343324 LOC100127930 0.057 PREDICTED: hypothetical protein COL22A1 0.049 collagen, type XXII, alpha 1 SPRED3 0.047 sprouty-related, EVH1 domain containing 3 isoform a... PRB3 0.047 proline-rich protein BstNI subfamily 3 precursor [H... FLJ22184 0.044 PREDICTED: hypothetical protein LOC80164 COL3A1 0.044 collagen type III alpha 1 preproprotein FLJ22184 0.044 PREDICTED: hypothetical protein FLJ22184 COL4A6 0.044 type IV alpha 6 collagen isoform A precursor COLEC12 0.044 collectin sub-family member 12 COL11A2 0.044 collagen, type XI, alpha 2 isoform 2 preproprotein ... COL11A2 0.044 collagen, type XI, alpha 2 isoform 3 preproprotein ... COL11A2 0.044 collagen, type XI, alpha 2 isoform 1 preproprotein ... COL27A1 0.044 collagen, type XXVII, alpha 1 PRRT1 0.044 NG5 protein COL4A6 0.044 type IV alpha 6 collagen isoform B precursor SRRM1 0.044 serine/arginine repetitive matrix 1 LOC100290139 0.042 PREDICTED: hypothetical protein XP_002346782 LOC100288835 0.042 PREDICTED: hypothetical protein XP_002342616 SCARA3 0.042 scavenger receptor class A, member 3 isoform 1 [Homo... C15orf39 0.042 hypothetical protein LOC56905 COL1A1 0.039 alpha 1 type I collagen preproprotein MAPT 0.039 microtubule-associated protein tau isoform 6 COL4A5 0.039 type IV collagen alpha 5 isoform 2 precursor CASKIN1 0.039 CASK interacting protein 1 COL2A1 0.039 collagen, type II, alpha 1 isoform 1 precursor [Hom... COL2A1 0.039 collagen, type II, alpha 1 isoform 2 precursor [Hom... COL7A1 0.039 alpha 1 type VII collagen precursor Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.