Guide to the Human Genome
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Name: SPRED3 Sequence: fasta or formatted (410aa) NCBI GI: 110225353
Description:

sprouty-related, EVH1 domain containing 3 isoform a

Referenced in:

Additional Genes in Development

Other entries for this name:
alt prot [152aa] sprouty-related, EVH1 domain containing 3 isoform b
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            14.4         59           4
 C cysteine            4.9         20           2
 D aspartate           3.4         14           2
 E glutamate           5.1         21           2
 F phenylalanine       2.2          9           1
 G glycine            10.2         42           4
 H histidine           2.7         11           2
 I isoleucine          1.2          5           2
 K lysine              1.7          7           1
 L leucine             9.0         37           2
 M methionine          0.7          3           1
 N asparagine          0.5          2           1
 P proline            11.5         47           3
 Q glutamine           2.2          9           1
 R arginine            8.8         36           3
 S serine             10.0         41           8
 T threonine           3.9         16           2
 V valine              4.4         18           2
 W tryptophan          1.5          6           1
 Y tyrosine            1.7          7           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   sprouty-related, EVH1 domain containing 3 isoform a... 
SPRED3                0.317   sprouty-related, EVH1 domain containing 3 isoform b ...
SPRED2                0.297   sprouty-related protein with EVH-1 domain 2 isoform...
SPRED2                0.297   sprouty-related protein with EVH-1 domain 2 isoform...
SPRED1                0.142   sprouty-related protein 1 with EVH-1 domain 
EVL                   0.065   Enah/Vasp-like 
VASP                  0.058   vasodilator-stimulated phosphoprotein 
SPRY3                 0.050   sprouty homolog 3 
ENAH                  0.046   enabled homolog isoform a 
ENAH                  0.046   enabled homolog isoform b 
SPRY2                 0.044   sprouty 2 
SPRY1                 0.042   sprouty homolog 1, antagonist of FGF signaling [Homo...
SPRY1                 0.042   sprouty homolog 1, antagonist of FGF signaling [Homo...
PHLDB1                0.037   pleckstrin homology-like domain, family B, member 1...
PHLDB1                0.037   pleckstrin homology-like domain, family B, member 1...
PHLDB1                0.037   pleckstrin homology-like domain, family B, member 1 ...
SPRY4                 0.036   sprouty homolog 4 isoform 2 
SPRY4                 0.036   sprouty homolog 4 isoform 1 
FMN2                  0.032   formin 2 
ANKRD43               0.032   ankyrin repeat domain 43 
RANBP9                0.032   RAN binding protein 9 
RERE                  0.030   atrophin-1 like protein isoform b 
RERE                  0.030   atrophin-1 like protein isoform a 
RERE                  0.030   atrophin-1 like protein isoform a 
MUC7                  0.030   mucin 7, secreted precursor 
MUC7                  0.030   mucin 7, secreted precursor 
MUC7                  0.030   mucin 7, secreted precursor 
UNCX                  0.030   UNC homeobox 
SRRM1                 0.030   serine/arginine repetitive matrix 1 
TNRC18                0.029   trinucleotide repeat containing 18 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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