PRRT1 36252

Name: PRRT1	Sequence: fasta or formatted (306aa)		NCBI GI: 77681565
Description: NG5 protein		Not currently referenced in the text
Composition: Amino acid Percentage Count Longest homopolymer A alanine 14.1 43 4 C cysteine 1.6 5 2 D aspartate 1.6 5 1 E glutamate 2.6 8 1 F phenylalanine 2.0 6 1 G glycine 8.8 27 2 H histidine 4.9 15 7 I isoleucine 3.9 12 3 K lysine 0.7 2 1 L leucine 6.9 21 2 M methionine 1.6 5 1 N asparagine 1.0 3 1 P proline 19.9 61 5 Q glutamine 3.9 12 1 R arginine 3.6 11 2 S serine 5.9 18 3 T threonine 7.5 23 2 V valine 5.6 17 2 W tryptophan 0.7 2 1 Y tyrosine 3.3 10 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 NG5 protein LOC642515 0.102 PREDICTED: similar to NG5 protein LOC642515 0.102 PREDICTED: similar to NG5 protein IQSEC2 0.078 IQ motif and Sec7 domain 2 isoform1 SHANK1 0.073 SH3 and multiple ankyrin repeat domains 1 SFPQ 0.072 splicing factor proline/glutamine rich (polypyrimidin... SF1 0.072 splicing factor 1 isoform 1 SF1 0.069 splicing factor 1 isoform 2 FLJ22184 0.067 PREDICTED: hypothetical protein FLJ22184 RAPH1 0.067 Ras association and pleckstrin homology domains 1 is... PRRT2 0.065 proline-rich transmembrane protein 2 FMN2 0.064 formin 2 MUC2 0.064 mucin 2 precursor WIPF1 0.064 WAS/WASL interacting protein family, member 1 [Homo... WIPF1 0.064 WAS/WASL interacting protein family, member 1 WASF2 0.064 WAS protein family, member 2 WBP11 0.064 WW domain binding protein 11 LOC642515 0.062 PREDICTED: similar to NG5 protein NACA 0.062 nascent polypeptide-associated complex alpha subuni... MAPK1IP1L 0.062 MAPK-interacting and spindle-stabilizing protein [Ho... PTPN23 0.062 protein tyrosine phosphatase, non-receptor type 23 [... DIAPH1 0.061 diaphanous 1 isoform 2 DIAPH1 0.061 diaphanous 1 isoform 1 SMARCC1 0.061 SWI/SNF-related matrix-associated actin-dependent r... WIPF3 0.059 WAS/WASL interacting protein family, member 3 [Homo... CPSF6 0.059 cleavage and polyadenylation specific factor 6, 68 ... RERE 0.059 atrophin-1 like protein isoform b RERE 0.059 atrophin-1 like protein isoform a RERE 0.059 atrophin-1 like protein isoform a SAMD1 0.058 sterile alpha motif domain containing 1 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.