LOC100294417 20990

Name: LOC100294417	Sequence: fasta or formatted (491aa)		NCBI GI: 239751849
Description: PREDICTED: hypothetical protein		Not currently referenced in the text
Composition: Amino acid Percentage Count Longest homopolymer A alanine 9.4 46 2 C cysteine 2.0 10 1 D aspartate 3.7 18 1 E glutamate 5.5 27 1 F phenylalanine 3.1 15 3 G glycine 9.2 45 3 H histidine 2.9 14 2 I isoleucine 2.2 11 1 K lysine 1.4 7 2 L leucine 11.6 57 3 M methionine 0.4 2 1 N asparagine 1.8 9 1 P proline 10.0 49 4 Q glutamine 7.1 35 2 R arginine 7.1 35 2 S serine 7.3 36 2 T threonine 2.9 14 2 V valine 9.8 48 3 W tryptophan 1.6 8 1 Y tyrosine 1.0 5 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 PREDICTED: hypothetical protein LOC100292175 0.623 PREDICTED: hypothetical protein LOC100293813 0.021 PREDICTED: hypothetical protein LOC642622 0.017 PREDICTED: similar to hCG1798126 LOC642622 0.017 PREDICTED: similar to hCG1798126 COL5A2 0.016 alpha 2 type V collagen preproprotein COL6A1 0.014 collagen, type VI, alpha 1 precursor COL1A1 0.014 alpha 1 type I collagen preproprotein LOC642622 0.014 PREDICTED: similar to hCG1798126, partial COL5A3 0.014 collagen, type V, alpha 3 preproprotein COL3A1 0.014 collagen type III alpha 1 preproprotein COL1A2 0.013 alpha 2 type I collagen FLJ22184 0.013 PREDICTED: hypothetical protein FLJ22184 COL7A1 0.013 alpha 1 type VII collagen precursor CBLL1 0.013 Cas-Br-M (murine) ecotropic retroviral transforming... LARP1 0.012 la related protein isoform 2 COL16A1 0.012 alpha 1 type XVI collagen precursor COL11A1 0.011 alpha 1 type XI collagen isoform B preproprotein [Ho... COL11A1 0.011 alpha 1 type XI collagen isoform C preproprotein [Ho... COL11A1 0.011 alpha 1 type XI collagen isoform A preproprotein [Ho... ATXN2 0.011 ataxin 2 COL17A1 0.011 alpha 1 type XVII collagen PRDM2 0.011 retinoblastoma protein-binding zinc finger protein i... PRDM2 0.011 retinoblastoma protein-binding zinc finger protein i... PRDM2 0.011 retinoblastoma protein-binding zinc finger protein i... COL21A1 0.011 collagen, type XXI, alpha 1 precursor COL13A1 0.011 alpha 1 type XIII collagen isoform 12 COL13A1 0.011 alpha 1 type XIII collagen isoform 7 TNIP1 0.010 TNFAIP3 interacting protein 1 LOC100291533 0.010 PREDICTED: hypothetical protein XP_002347080 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.