LARP1 33957

Name: LARP1	Sequence: fasta or formatted (1096aa)		NCBI GI: 61102725
Description: la related protein isoform 2		Referenced in: RNA-binding Proteins
Other entries for this name: alt prot [1019aa] la related protein isoform 1
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.5 60 2 C cysteine 0.6 7 1 D aspartate 5.5 60 2 E glutamate 8.8 96 2 F phenylalanine 3.8 42 2 G glycine 8.0 88 5 H histidine 2.4 26 1 I isoleucine 2.6 29 1 K lysine 7.8 86 3 L leucine 6.2 68 2 M methionine 1.6 17 1 N asparagine 3.0 33 2 P proline 10.2 112 3 Q glutamine 5.0 55 2 R arginine 7.6 83 3 S serine 7.1 78 3 T threonine 5.4 59 2 V valine 4.7 52 2 W tryptophan 1.2 13 1 Y tyrosine 2.9 32 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 la related protein isoform 2 LARP1 0.867 la related protein isoform 1 LARP1B 0.451 La ribonucleoprotein domain family member 2 isoform ... LARP1B 0.218 La ribonucleoprotein domain family member 2 isoform ... LARP1B 0.119 La ribonucleoprotein domain family member 2 isoform ... LOC644578 0.033 PREDICTED: similar to hCG2040199 LOC644578 0.033 PREDICTED: similar to hCG2040199 LOC644578 0.033 PREDICTED: similar to hCG2040199 LARP4 0.022 c-Mpl binding protein isoform a LARP4 0.022 c-Mpl binding protein isoform c LARP4 0.022 c-Mpl binding protein isoform b SSB 0.019 autoantigen La LARP7 0.015 La ribonucleoprotein domain family, member 7 LARP7 0.015 La ribonucleoprotein domain family, member 7 PRB1 0.014 proline-rich protein BstNI subfamily 1 isoform 1 pre... PRB3 0.013 proline-rich protein BstNI subfamily 3 precursor [H... LARP4B 0.013 La ribonucleoprotein domain family, member 4B LARP6 0.013 La ribonucleoprotein domain family, member 6 isoform... COL1A1 0.012 alpha 1 type I collagen preproprotein C2orf55 0.012 hypothetical protein LOC343990 PCLO 0.012 piccolo isoform 2 PCLO 0.012 piccolo isoform 1 RANBP9 0.011 RAN binding protein 9 FLJ37078 0.011 hypothetical protein LOC222183 PRB2 0.011 proline-rich protein BstNI subfamily 2 SRRM1 0.011 serine/arginine repetitive matrix 1 NEFM 0.010 neurofilament, medium polypeptide 150kDa isoform 1 ... NEFM 0.010 neurofilament, medium polypeptide 150kDa isoform 2 ... COL7A1 0.010 alpha 1 type VII collagen precursor BAT2 0.010 HLA-B associated transcript-2 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.