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Search of human proteins with 10864059
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|10864059 calpain 10 isoform h [Homo sapiens]
(138 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|10864059 calpain 10 isoform h [Homo sapiens] 279 5e-76
gi|13186302 calpain 10 isoform a [Homo sapiens] 186 5e-48
gi|89353291 calpain 10 isoform c [Homo sapiens] 184 2e-47
gi|13186314 calpain 10 isoform g [Homo sapiens] 100 7e-22
gi|12408656 calpain 1, large subunit [Homo sapiens] 34 0.044
gi|47078247 calpain 3 isoform f [Homo sapiens] 33 0.098
gi|4557405 calpain 3 isoform a [Homo sapiens] 33 0.098
gi|27765072 calpain 3 isoform b [Homo sapiens] 33 0.098
gi|27765076 calpain 3 isoform d [Homo sapiens] 33 0.098
gi|27765074 calpain 3 isoform c [Homo sapiens] 33 0.098
gi|221554549 calpain 8 [Homo sapiens] 32 0.22
gi|215490104 calpain 11 [Homo sapiens] 31 0.37
gi|38707981 calpain 12 [Homo sapiens] 31 0.37
gi|7656959 calpain 7 [Homo sapiens] 31 0.37
gi|41152101 calpain 13 [Homo sapiens] 30 0.63
gi|157389005 calpain 2 isoform 1 [Homo sapiens] 30 0.83
gi|225703100 calpain 2 isoform 2 [Homo sapiens] 30 0.83
gi|23957700 zinc finger protein 114 [Homo sapiens] 30 0.83
gi|7705383 calpain 9 isoform 2 [Homo sapiens] 28 1.8
gi|5729758 calpain 9 isoform 1 [Homo sapiens] 28 1.8
gi|5174545 myocyte enhancer factor 2D [Homo sapiens] 28 1.8
gi|32307109 WAP four-disulfide core domain 3 precursor [Homo sap... 28 3.1
gi|7305199 Kv channel interacting protein 3 isoform 1 [Homo sapi... 27 5.4
gi|223029519 component of oligomeric golgi complex 2 isoform 2 [... 27 7.0
gi|6678676 component of oligomeric golgi complex 2 isoform 1 [Ho... 27 7.0
gi|81174549 hypothetical protein LOC84792 [Homo sapiens] 27 7.0
gi|38348280 SH2 domain containing 6 [Homo sapiens] 27 7.0
gi|52317150 olfactory receptor, family 51, subfamily D, member 1... 27 7.0
gi|188595687 gamma filamin isoform b [Homo sapiens] 26 9.2
gi|116805322 gamma filamin isoform a [Homo sapiens] 26 9.2
>gi|10864059 calpain 10 isoform h [Homo sapiens]
Length = 138
Score = 279 bits (714), Expect = 5e-76
Identities = 138/138 (100%), Positives = 138/138 (100%)
Query: 1 MRAGRGATPARELFRDAAFPAADSSLFCDLSTPLAQFREDITWRRPQVPEGGRSQDAPPL 60
MRAGRGATPARELFRDAAFPAADSSLFCDLSTPLAQFREDITWRRPQVPEGGRSQDAPPL
Sbjct: 1 MRAGRGATPARELFRDAAFPAADSSLFCDLSTPLAQFREDITWRRPQVPEGGRSQDAPPL 60
Query: 61 LLQEPLLSCVPHRYAQEVSRLCLLPAGTYKVVPSTYLPDTEGAFTVTIATRIDRPSIHSQ 120
LLQEPLLSCVPHRYAQEVSRLCLLPAGTYKVVPSTYLPDTEGAFTVTIATRIDRPSIHSQ
Sbjct: 61 LLQEPLLSCVPHRYAQEVSRLCLLPAGTYKVVPSTYLPDTEGAFTVTIATRIDRPSIHSQ 120
Query: 121 EMLGQFLQEVSVMAVMKT 138
EMLGQFLQEVSVMAVMKT
Sbjct: 121 EMLGQFLQEVSVMAVMKT 138
>gi|13186302 calpain 10 isoform a [Homo sapiens]
Length = 672
Score = 186 bits (472), Expect = 5e-48
Identities = 92/92 (100%), Positives = 92/92 (100%)
Query: 47 QVPEGGRSQDAPPLLLQEPLLSCVPHRYAQEVSRLCLLPAGTYKVVPSTYLPDTEGAFTV 106
QVPEGGRSQDAPPLLLQEPLLSCVPHRYAQEVSRLCLLPAGTYKVVPSTYLPDTEGAFTV
Sbjct: 581 QVPEGGRSQDAPPLLLQEPLLSCVPHRYAQEVSRLCLLPAGTYKVVPSTYLPDTEGAFTV 640
Query: 107 TIATRIDRPSIHSQEMLGQFLQEVSVMAVMKT 138
TIATRIDRPSIHSQEMLGQFLQEVSVMAVMKT
Sbjct: 641 TIATRIDRPSIHSQEMLGQFLQEVSVMAVMKT 672
Score = 99.8 bits (247), Expect = 7e-22
Identities = 47/47 (100%), Positives = 47/47 (100%)
Query: 1 MRAGRGATPARELFRDAAFPAADSSLFCDLSTPLAQFREDITWRRPQ 47
MRAGRGATPARELFRDAAFPAADSSLFCDLSTPLAQFREDITWRRPQ
Sbjct: 1 MRAGRGATPARELFRDAAFPAADSSLFCDLSTPLAQFREDITWRRPQ 47
Score = 39.3 bits (90), Expect = 0.001
Identities = 20/56 (35%), Positives = 27/56 (48%)
Query: 53 RSQDAPPLLLQEPLLSCVPHRYAQEVSRLCLLPAGTYKVVPSTYLPDTEGAFTVTI 108
R + P +L P+ H Y +EV C L G Y VPST+L D G F + +
Sbjct: 430 RRVNLPRVLSMPPVAGTACHAYDREVHLRCELSPGYYLAVPSTFLKDAPGEFLLRV 485
>gi|89353291 calpain 10 isoform c [Homo sapiens]
Length = 517
Score = 184 bits (468), Expect = 2e-47
Identities = 91/92 (98%), Positives = 92/92 (100%)
Query: 47 QVPEGGRSQDAPPLLLQEPLLSCVPHRYAQEVSRLCLLPAGTYKVVPSTYLPDTEGAFTV 106
+VPEGGRSQDAPPLLLQEPLLSCVPHRYAQEVSRLCLLPAGTYKVVPSTYLPDTEGAFTV
Sbjct: 426 KVPEGGRSQDAPPLLLQEPLLSCVPHRYAQEVSRLCLLPAGTYKVVPSTYLPDTEGAFTV 485
Query: 107 TIATRIDRPSIHSQEMLGQFLQEVSVMAVMKT 138
TIATRIDRPSIHSQEMLGQFLQEVSVMAVMKT
Sbjct: 486 TIATRIDRPSIHSQEMLGQFLQEVSVMAVMKT 517
Score = 99.8 bits (247), Expect = 7e-22
Identities = 47/47 (100%), Positives = 47/47 (100%)
Query: 1 MRAGRGATPARELFRDAAFPAADSSLFCDLSTPLAQFREDITWRRPQ 47
MRAGRGATPARELFRDAAFPAADSSLFCDLSTPLAQFREDITWRRPQ
Sbjct: 1 MRAGRGATPARELFRDAAFPAADSSLFCDLSTPLAQFREDITWRRPQ 47
>gi|13186314 calpain 10 isoform g [Homo sapiens]
Length = 139
Score = 99.8 bits (247), Expect = 7e-22
Identities = 47/47 (100%), Positives = 47/47 (100%)
Query: 1 MRAGRGATPARELFRDAAFPAADSSLFCDLSTPLAQFREDITWRRPQ 47
MRAGRGATPARELFRDAAFPAADSSLFCDLSTPLAQFREDITWRRPQ
Sbjct: 1 MRAGRGATPARELFRDAAFPAADSSLFCDLSTPLAQFREDITWRRPQ 47
>gi|12408656 calpain 1, large subunit [Homo sapiens]
Length = 714
Score = 33.9 bits (76), Expect = 0.044
Identities = 18/59 (30%), Positives = 30/59 (50%)
Query: 76 QEVSRLCLLPAGTYKVVPSTYLPDTEGAFTVTIATRIDRPSIHSQEMLGQFLQEVSVMA 134
+EVS LP G Y VVPST+ P+ EG F + + ++ + + L + V++
Sbjct: 481 REVSTRFRLPPGEYVVVPSTFEPNKEGDFVLRFFSEKSAGTVELDDQIQANLPDEQVLS 539
>gi|47078247 calpain 3 isoform f [Homo sapiens]
Length = 728
Score = 32.7 bits (73), Expect = 0.098
Identities = 15/33 (45%), Positives = 20/33 (60%)
Query: 76 QEVSRLCLLPAGTYKVVPSTYLPDTEGAFTVTI 108
+EVS+ LP Y +VPSTY P EG F + +
Sbjct: 454 REVSQRFRLPPSEYVIVPSTYEPHQEGEFILRV 486
>gi|4557405 calpain 3 isoform a [Homo sapiens]
Length = 821
Score = 32.7 bits (73), Expect = 0.098
Identities = 15/33 (45%), Positives = 20/33 (60%)
Query: 76 QEVSRLCLLPAGTYKVVPSTYLPDTEGAFTVTI 108
+EVS+ LP Y +VPSTY P EG F + +
Sbjct: 541 REVSQRFRLPPSEYVIVPSTYEPHQEGEFILRV 573
>gi|27765072 calpain 3 isoform b [Homo sapiens]
Length = 815
Score = 32.7 bits (73), Expect = 0.098
Identities = 15/33 (45%), Positives = 20/33 (60%)
Query: 76 QEVSRLCLLPAGTYKVVPSTYLPDTEGAFTVTI 108
+EVS+ LP Y +VPSTY P EG F + +
Sbjct: 541 REVSQRFRLPPSEYVIVPSTYEPHQEGEFILRV 573
>gi|27765076 calpain 3 isoform d [Homo sapiens]
Length = 309
Score = 32.7 bits (73), Expect = 0.098
Identities = 15/33 (45%), Positives = 20/33 (60%)
Query: 76 QEVSRLCLLPAGTYKVVPSTYLPDTEGAFTVTI 108
+EVS+ LP Y +VPSTY P EG F + +
Sbjct: 29 REVSQRFRLPPSEYVIVPSTYEPHQEGEFILRV 61
>gi|27765074 calpain 3 isoform c [Homo sapiens]
Length = 729
Score = 32.7 bits (73), Expect = 0.098
Identities = 15/33 (45%), Positives = 20/33 (60%)
Query: 76 QEVSRLCLLPAGTYKVVPSTYLPDTEGAFTVTI 108
+EVS+ LP Y +VPSTY P EG F + +
Sbjct: 493 REVSQRFRLPPSEYVIVPSTYEPHQEGEFILRV 525
>gi|221554549 calpain 8 [Homo sapiens]
Length = 703
Score = 31.6 bits (70), Expect = 0.22
Identities = 15/33 (45%), Positives = 20/33 (60%)
Query: 76 QEVSRLCLLPAGTYKVVPSTYLPDTEGAFTVTI 108
+EVS LP G Y VVPST+ P +G F + +
Sbjct: 471 REVSGRARLPPGEYLVVPSTFEPFKDGEFCLRV 503
>gi|215490104 calpain 11 [Homo sapiens]
Length = 739
Score = 30.8 bits (68), Expect = 0.37
Identities = 18/37 (48%), Positives = 25/37 (67%), Gaps = 2/37 (5%)
Query: 12 ELFRDAAFPAADSSL-FCDLSTPLAQFREDITWRRPQ 47
ELF D FPA SSL F DL P ++ ++I+W+RP+
Sbjct: 78 ELFEDPLFPAEPSSLGFKDLG-PNSKNVQNISWQRPK 113
Score = 30.4 bits (67), Expect = 0.49
Identities = 19/59 (32%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Query: 75 AQEVSRLCLLPAGTYKVVPSTYLPDTEGAFTVTIATRIDRPSIHSQEM-LGQFLQEVSV 132
++EVS LP G Y ++PST+ P + F + + T S E+ + LQE V
Sbjct: 505 SREVSSQLRLPPGEYIIIPSTFEPHRDADFLLRVFTEKHSESWELDEVNYAEQLQEEKV 563
>gi|38707981 calpain 12 [Homo sapiens]
Length = 719
Score = 30.8 bits (68), Expect = 0.37
Identities = 16/55 (29%), Positives = 28/55 (50%)
Query: 76 QEVSRLCLLPAGTYKVVPSTYLPDTEGAFTVTIATRIDRPSIHSQEMLGQFLQEV 130
++V+R C L G Y VVPST E FT+ + + ++ +++ LQ +
Sbjct: 487 RDVTRRCCLRPGHYLVVPSTAHAGDEADFTLRVFSERRHTAVEIDDVISADLQSL 541
Score = 27.7 bits (60), Expect = 3.1
Identities = 13/34 (38%), Positives = 18/34 (52%)
Query: 13 LFRDAAFPAADSSLFCDLSTPLAQFREDITWRRP 46
LFRD FPA +L D P ++ + + W RP
Sbjct: 45 LFRDPYFPAGPDALGYDQLGPDSEKAKGVKWMRP 78
>gi|7656959 calpain 7 [Homo sapiens]
Length = 813
Score = 30.8 bits (68), Expect = 0.37
Identities = 10/21 (47%), Positives = 16/21 (76%)
Query: 84 LPAGTYKVVPSTYLPDTEGAF 104
+P+G + ++PST+LP EG F
Sbjct: 777 IPSGIFNIIPSTFLPKQEGPF 797
>gi|41152101 calpain 13 [Homo sapiens]
Length = 669
Score = 30.0 bits (66), Expect = 0.63
Identities = 18/40 (45%), Positives = 24/40 (60%), Gaps = 4/40 (10%)
Query: 14 FRDAAFPAADSSLFCDLSTPLAQFR-EDITWRRPQVPEGG 52
F+D FPAADSS+ L L + R ++ W+RPQ GG
Sbjct: 35 FKDETFPAADSSIGQKL---LQEKRLSNVIWKRPQDLPGG 71
>gi|157389005 calpain 2 isoform 1 [Homo sapiens]
Length = 700
Score = 29.6 bits (65), Expect = 0.83
Identities = 13/33 (39%), Positives = 20/33 (60%)
Query: 76 QEVSRLCLLPAGTYKVVPSTYLPDTEGAFTVTI 108
+EV LP G Y +VPST+ P+ +G F + +
Sbjct: 469 REVLNRFKLPPGEYILVPSTFEPNKDGDFCIRV 501
Score = 27.3 bits (59), Expect = 4.1
Identities = 14/37 (37%), Positives = 19/37 (51%)
Query: 10 ARELFRDAAFPAADSSLFCDLSTPLAQFREDITWRRP 46
A LF+D +FPA S+L P + I W+RP
Sbjct: 42 AGTLFQDPSFPAIPSALGFKELGPYSSKTRGIEWKRP 78
>gi|225703100 calpain 2 isoform 2 [Homo sapiens]
Length = 622
Score = 29.6 bits (65), Expect = 0.83
Identities = 13/33 (39%), Positives = 20/33 (60%)
Query: 76 QEVSRLCLLPAGTYKVVPSTYLPDTEGAFTVTI 108
+EV LP G Y +VPST+ P+ +G F + +
Sbjct: 391 REVLNRFKLPPGEYILVPSTFEPNKDGDFCIRV 423
>gi|23957700 zinc finger protein 114 [Homo sapiens]
Length = 417
Score = 29.6 bits (65), Expect = 0.83
Identities = 23/87 (26%), Positives = 34/87 (39%), Gaps = 9/87 (10%)
Query: 5 RGATPARELFRDAAFPAADSSLFCDLSTPLAQFREDITWRRPQVPE---GGRSQDAPPLL 61
+ ATP ++ FP A+ +S+ + RED WR P+ E G + PP +
Sbjct: 54 KDATPQPDILPKRTFPEANRVCLTSISSQHSTLRED--WRCPKTEEPHRQGVNNVKPPAV 111
Query: 62 LQE----PLLSCVPHRYAQEVSRLCLL 84
E P+ C H C L
Sbjct: 112 APEKDESPVSICEDHEMRNHSKPTCRL 138
>gi|7705383 calpain 9 isoform 2 [Homo sapiens]
Length = 664
Score = 28.5 bits (62), Expect = 1.8
Identities = 14/33 (42%), Positives = 19/33 (57%)
Query: 76 QEVSRLCLLPAGTYKVVPSTYLPDTEGAFTVTI 108
+EVS LP G Y ++PST+ P E F + I
Sbjct: 427 REVSDRFKLPPGEYILIPSTFEPHQEADFCLRI 459
Score = 27.3 bits (59), Expect = 4.1
Identities = 16/34 (47%), Positives = 19/34 (55%), Gaps = 5/34 (14%)
Query: 13 LFRDAAFPAADSSLFCDLSTPLAQFREDITWRRP 46
LF DA FPA++SSLF P F W+RP
Sbjct: 42 LFEDADFPASNSSLFYS-ERPQIPF----VWKRP 70
>gi|5729758 calpain 9 isoform 1 [Homo sapiens]
Length = 690
Score = 28.5 bits (62), Expect = 1.8
Identities = 14/33 (42%), Positives = 19/33 (57%)
Query: 76 QEVSRLCLLPAGTYKVVPSTYLPDTEGAFTVTI 108
+EVS LP G Y ++PST+ P E F + I
Sbjct: 453 REVSDRFKLPPGEYILIPSTFEPHQEADFCLRI 485
Score = 27.3 bits (59), Expect = 4.1
Identities = 16/34 (47%), Positives = 19/34 (55%), Gaps = 5/34 (14%)
Query: 13 LFRDAAFPAADSSLFCDLSTPLAQFREDITWRRP 46
LF DA FPA++SSLF P F W+RP
Sbjct: 42 LFEDADFPASNSSLFYS-ERPQIPF----VWKRP 70
>gi|5174545 myocyte enhancer factor 2D [Homo sapiens]
Length = 521
Score = 28.5 bits (62), Expect = 1.8
Identities = 27/98 (27%), Positives = 43/98 (43%), Gaps = 8/98 (8%)
Query: 16 DAAFPAADSSLFCDLSTPLAQFREDIT-WRRPQVPEGGRS----QDAPPLLLQ-EPLLSC 69
D +A+ S S+P ++T W++PQ P+ + Q PP Q +P
Sbjct: 336 DYQLTSAELSSLPAFSSPGGLSLGNVTAWQQPQQPQQPQQPQPPQQQPPQPQQPQPQQPQ 395
Query: 70 VPHRYAQEVSRLCLLPAGTYKVVPSTYLPDTEGAFTVT 107
P + Q+ S L +P ++P + LP A TVT
Sbjct: 396 QPQQPPQQQSHL--VPVSLSNLIPGSPLPHVGAALTVT 431
>gi|32307109 WAP four-disulfide core domain 3 precursor [Homo
sapiens]
Length = 231
Score = 27.7 bits (60), Expect = 3.1
Identities = 14/44 (31%), Positives = 20/44 (45%)
Query: 50 EGGRSQDAPPLLLQEPLLSCVPHRYAQEVSRLCLLPAGTYKVVP 93
EGGR D P +L+ ++ CV Q + C G + V P
Sbjct: 163 EGGRGGDCPKVLVGLCIVGCVMDENCQAGEKCCKSGCGRFCVPP 206
>gi|7305199 Kv channel interacting protein 3 isoform 1 [Homo
sapiens]
Length = 256
Score = 26.9 bits (58), Expect = 5.4
Identities = 17/41 (41%), Positives = 27/41 (65%), Gaps = 7/41 (17%)
Query: 9 PARELFRDAAFPAADSSLFCDLS-TPLAQFREDITWRRPQV 48
PA+E+ + A+D SL DL TPL++ +E I W+RP++
Sbjct: 3 PAKEVTK-----ASDGSLLGDLGHTPLSK-KEGIKWQRPRL 37
>gi|223029519 component of oligomeric golgi complex 2 isoform 2
[Homo sapiens]
Length = 737
Score = 26.6 bits (57), Expect = 7.0
Identities = 13/27 (48%), Positives = 16/27 (59%)
Query: 30 LSTPLAQFREDITWRRPQVPEGGRSQD 56
LS PL Q RE++ R V EG R+ D
Sbjct: 88 LSVPLGQLREEVLSLRSSVSEGIRAVD 114
>gi|6678676 component of oligomeric golgi complex 2 isoform 1 [Homo
sapiens]
Length = 738
Score = 26.6 bits (57), Expect = 7.0
Identities = 13/27 (48%), Positives = 16/27 (59%)
Query: 30 LSTPLAQFREDITWRRPQVPEGGRSQD 56
LS PL Q RE++ R V EG R+ D
Sbjct: 88 LSVPLGQLREEVLSLRSSVSEGIRAVD 114
>gi|81174549 hypothetical protein LOC84792 [Homo sapiens]
Length = 259
Score = 26.6 bits (57), Expect = 7.0
Identities = 23/83 (27%), Positives = 34/83 (40%), Gaps = 11/83 (13%)
Query: 44 RRPQVPEGGRSQDAPPLLLQEPLLSCVPHRYAQEVSRLCL--LPAGTYKVVPSTYL-PDT 100
R +VPE G QD PP S P E+ CL + + T V P L +T
Sbjct: 157 RHQKVPEMGSFQDDPP--------SAFPKGLGSELEPACLHSILSATLHVYPEVLLSEET 208
Query: 101 EGAFTVTIATRIDRPSIHSQEML 123
+ F + + +I ++ML
Sbjct: 209 KRIFLDRLKPMFSKQTIEFKKML 231
>gi|38348280 SH2 domain containing 6 [Homo sapiens]
Length = 175
Score = 26.6 bits (57), Expect = 7.0
Identities = 22/63 (34%), Positives = 27/63 (42%), Gaps = 1/63 (1%)
Query: 49 PEGGRSQDAPPLLLQEPLLSCVPHRYAQEVSRLCLLPAGTYKVVPSTYLPDTEGAFTVTI 108
P G S LL +P S RYA E + L L G Y V PS+ P FT+ +
Sbjct: 48 PTGSASAAEDSDLLTQPWYSGNCDRYAVESALLHLQKDGAYTVRPSSG-PHGSQPFTLAV 106
Query: 109 ATR 111
R
Sbjct: 107 LLR 109
>gi|52317150 olfactory receptor, family 51, subfamily D, member 1
[Homo sapiens]
Length = 324
Score = 26.6 bits (57), Expect = 7.0
Identities = 18/54 (33%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
Query: 60 LLLQEPLLSC-VPHRYAQEVSRLCLLPAGTYKVVPSTYLPDTEGAFTVTIATRI 112
L+ PL+ V HR S L ++ A TY ++P P GA T I +R+
Sbjct: 262 LVFYVPLIGLSVVHRLGGPTSLLHVVMANTYLLLPPVVNPLVYGAKTKEICSRV 315
>gi|188595687 gamma filamin isoform b [Homo sapiens]
Length = 2692
Score = 26.2 bits (56), Expect = 9.2
Identities = 12/22 (54%), Positives = 15/22 (68%), Gaps = 3/22 (13%)
Query: 87 GTYKVVPSTYLPDTEGAFTVTI 108
GTY V +YLPD G +T+TI
Sbjct: 1596 GTYTV---SYLPDMSGRYTITI 1614
>gi|116805322 gamma filamin isoform a [Homo sapiens]
Length = 2725
Score = 26.2 bits (56), Expect = 9.2
Identities = 12/22 (54%), Positives = 15/22 (68%), Gaps = 3/22 (13%)
Query: 87 GTYKVVPSTYLPDTEGAFTVTI 108
GTY V +YLPD G +T+TI
Sbjct: 1596 GTYTV---SYLPDMSGRYTITI 1614
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.321 0.135 0.405
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,698,463
Number of Sequences: 37866
Number of extensions: 270366
Number of successful extensions: 598
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 565
Number of HSP's gapped (non-prelim): 42
length of query: 138
length of database: 18,247,518
effective HSP length: 91
effective length of query: 47
effective length of database: 14,801,712
effective search space: 695680464
effective search space used: 695680464
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 56 (26.2 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.