Guide to the Human Genome
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Name: C7orf70 Sequence: fasta or formatted (259aa) NCBI GI: 81174549
Description:

hypothetical protein LOC84792

Not currently referenced in the text

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.3         19           2
 C cysteine            2.7          7           1
 D aspartate           4.6         12           2
 E glutamate           5.8         15           2
 F phenylalanine       3.1          8           1
 G glycine             9.7         25           3
 H histidine           2.3          6           1
 I isoleucine          1.5          4           1
 K lysine              5.4         14           2
 L leucine            11.6         30           2
 M methionine          2.7          7           1
 N asparagine          1.5          4           1
 P proline             9.7         25           2
 Q glutamine           3.9         10           2
 R arginine            6.9         18           2
 S serine              9.7         25           1
 T threonine           4.2         11           1
 V valine              5.0         13           2
 W tryptophan          1.5          4           1
 Y tyrosine            0.8          2           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   hypothetical protein LOC84792 
GJD4                  0.024   connexin40.1 
LOC728800             0.016   PREDICTED: similar to FLJ00402 protein 
LOC728800             0.016   PREDICTED: similar to FLJ00402 protein 
CD19                  0.016   CD19 antigen 
RBM16                 0.016   RNA-binding motif protein 16 
SEC16A                0.014   SEC16 homolog A 
MST150                0.014   putative small membrane protein NID67 
HCN4                  0.012   hyperpolarization activated cyclic nucleotide-gated p...
LOC100292751          0.012   PREDICTED: similar to hCG2005276 
LOC100290602          0.012   PREDICTED: hypothetical protein XP_002347933 
LOC100294438          0.012   PREDICTED: hypothetical protein 
LOC100288051          0.012   PREDICTED: hypothetical protein XP_002344200 
KRTAP4-6              0.010   PREDICTED: keratin associated protein 4.6 
BBC3                  0.010   BCL2 binding component 3 isoform 4 
LOC643355             0.010   PREDICTED: hypothetical protein 
LOC643355             0.010   PREDICTED: hypothetical protein 
KAT2A                 0.010   general control of amino acid synthesis 5-like 2 [H...
IFRD2                 0.010   interferon-related developmental regulator 2 
SMARCA1               0.008   SWI/SNF-related matrix-associated actin-dependent r...
SMARCA1               0.008   SWI/SNF-related matrix-associated actin-dependent re...
GGN                   0.008   gametogenetin 
VWA5B2                0.008   von Willebrand factor A domain containing 5B2 [Homo...
MED26                 0.008   mediator complex subunit 26 
FKBPL                 0.008   WAF-1/CIP1 stabilizing protein 39 
ARMC2                 0.008   armadillo repeat containing 2 
AKAP8L                0.008   A kinase (PRKA) anchor protein 8-like 
LOC100292950          0.006   PREDICTED: hypothetical protein 
LOC100293034          0.006   PREDICTED: similar to c-jun 
LOC100291417          0.006   PREDICTED: hypothetical protein XP_002346430 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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