Guide to the Human Genome
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Name: MEF2D Sequence: fasta or formatted (521aa) NCBI GI: 5174545
Description:

myocyte enhancer factor 2D

Referenced in:

Muscle
Additional Genes in Development

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.7         35           2
 C cysteine            0.8          4           1
 D aspartate           4.2         22           2
 E glutamate           4.2         22           2
 F phenylalanine       2.3         12           1
 G glycine             7.1         37           2
 H histidine           2.1         11           2
 I isoleucine          2.5         13           2
 K lysine              3.6         19           2
 L leucine            10.2         53           2
 M methionine          1.5          8           1
 N asparagine          4.0         21           2
 P proline            13.1         68           4
 Q glutamine           8.1         42           3
 R arginine            5.0         26           2
 S serine             11.1         58           2
 T threonine           6.0         31           2
 V valine              5.2         27           2
 W tryptophan          0.4          2           1
 Y tyrosine            1.9         10           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   myocyte enhancer factor 2D 
MEF2A                 0.457   myocyte enhancer factor 2A isoform 2 
MEF2A                 0.445   myocyte enhancer factor 2A isoform 1 
MEF2C                 0.405   myocyte enhancer factor 2C isoform 1 
MEF2C                 0.375   myocyte enhancer factor 2C isoform 2 
MEF2A                 0.307   myocyte enhancer factor 2A isoform 3 
MEF2A                 0.301   myocyte enhancer factor 2A isoform 4 
LOC729991-MEF2B       0.151   myocyte enhancer factor 2B isoform b 
MEF2B                 0.150   myocyte enhancer factor 2B isoform a 
LOC100294395          0.143   PREDICTED: similar to serum response factor-related...
SFPQ                  0.044   splicing factor proline/glutamine rich (polypyrimidin...
FAM48B1               0.039   hypothetical protein LOC100130302 
SYN1                  0.037   synapsin I isoform Ia 
SYN1                  0.037   synapsin I isoform Ib 
MYST3                 0.036   MYST histone acetyltransferase (monocytic leukemia)...
MYST3                 0.036   MYST histone acetyltransferase (monocytic leukemia)...
MYST3                 0.036   MYST histone acetyltransferase (monocytic leukemia)...
SMARCA2               0.035   SWI/SNF-related matrix-associated actin-dependent re...
SMARCA2               0.035   SWI/SNF-related matrix-associated actin-dependent re...
FLJ22184              0.034   PREDICTED: hypothetical protein FLJ22184 
ARID1A                0.034   AT rich interactive domain 1A isoform a 
ARID1A                0.034   AT rich interactive domain 1A isoform b 
SRF                   0.033   serum response factor (c-fos serum response element-b...
RBM33                 0.033   RNA binding motif protein 33 
POU6F2                0.033   POU domain, class 6, transcription factor 2 
ATN1                  0.032   atrophin-1 
ATN1                  0.032   atrophin-1 
MED12L                0.030   mediator of RNA polymerase II transcription, subunit...
MLL2                  0.030   myeloid/lymphoid or mixed-lineage leukemia 2 
GLTSCR1               0.030   glioma tumor suppressor candidate region gene 1 [Ho...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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