Guide to the Human Genome
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Name: WFDC3 Sequence: fasta or formatted (231aa) NCBI GI: 32307109
Description:

WAP four-disulfide core domain 3 precursor

Referenced in:

Protease Inhibitors

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             3.9          9           1
 C cysteine           14.3         33           2
 D aspartate           4.8         11           1
 E glutamate           7.4         17           2
 F phenylalanine       1.3          3           1
 G glycine            10.8         25           2
 H histidine           1.3          3           1
 I isoleucine          3.9          9           1
 K lysine              8.2         19           2
 L leucine             9.1         21           2
 M methionine          1.7          4           2
 N asparagine          2.2          5           1
 P proline             8.7         20           2
 Q glutamine           2.6          6           1
 R arginine            4.8         11           1
 S serine              4.8         11           1
 T threonine           4.3         10           2
 V valine              5.2         12           2
 W tryptophan          0.9          2           1
 Y tyrosine            0.0          0           0
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   WAP four-disulfide core domain 3 precursor 
WFDC8                 0.096   WAP four-disulfide core domain 8 precursor 
WFDC8                 0.096   WAP four-disulfide core domain 8 precursor 
SLPI                  0.086   secretory leukocyte peptidase inhibitor precursor [Ho...
WFDC2                 0.084   WAP four-disulfide core domain 2 precursor 
WFDC5                 0.081   WAP four-disulfide core domain 5 precursor 
KRTAP10-6             0.055   keratin associated protein 10-6 
KAL1                  0.053   Kallmann syndrome 1 protein precursor 
KRTAP10-4             0.053   keratin associated protein 10-4 
KRTAP5-3              0.047   keratin associated protein 5-3 
KRTAP10-7             0.045   keratin associated protein 10-7 
LOC100293676          0.043   PREDICTED: similar to Fc fragment of IgG binding pr...
LOC100290309          0.043   PREDICTED: hypothetical protein XP_002348012 
FCGBP                 0.043   Fc fragment of IgG binding protein 
KRTAP5-8              0.043   keratin associated protein 5-8 
SSPO                  0.041   SCO-spondin 
NFXL1                 0.041   nuclear transcription factor, X-box binding-like 1 [...
KRTAP9-4              0.041   keratin associated protein 9-4 
KRTAP10-2             0.039   keratin associated protein 10-2 
KRTAP9-3              0.039   keratin associated protein 9.3 
KRTAP5-1              0.039   keratin associated protein 5-1 
KRTAP4-11             0.037   keratin associated protein 4-11 
WFDC12                0.037   WAP four-disulfide core domain 12 precursor 
PI3                   0.037   elafin preproprotein 
LOC100131696          0.035   PREDICTED: keratin associated protein 
KRTAP17-1             0.035   keratin associated protein 17-1 
KRTAP9-8              0.035   keratin associated protein 9.8 
TNC                   0.035   tenascin C precursor 
KRTAP9-2              0.035   keratin associated protein 9.2 
KRTAP4-4              0.033   keratin associated protein 4.4 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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