CAPN10 295

Name: CAPN10	Sequence: fasta or formatted (138aa)		NCBI GI: 10864059
Description: calpain 10 isoform h		Referenced in: Cysteine Proteases
Other entries for this name: alt prot [672aa] calpain 10 isoform a alt prot [139aa] calpain 10 isoform g alt prot [517aa] calpain 10 isoform c
Composition: Amino acid Percentage Count Longest homopolymer A alanine 10.1 14 2 C cysteine 2.2 3 1 D aspartate 5.1 7 1 E glutamate 5.8 8 1 F phenylalanine 4.3 6 1 G glycine 5.1 7 2 H histidine 1.4 2 1 I isoleucine 2.9 4 1 K lysine 1.4 2 1 L leucine 10.9 15 3 M methionine 2.9 4 1 N asparagine 0.0 0 0 P proline 9.4 13 2 Q glutamine 5.8 8 1 R arginine 8.7 12 2 S serine 7.2 10 2 T threonine 7.2 10 1 V valine 6.5 9 2 W tryptophan 0.7 1 1 Y tyrosine 2.2 3 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 calpain 10 isoform h CAPN10 0.634 calpain 10 isoform a CAPN10 0.626 calpain 10 isoform c CAPN10 0.295 calpain 10 isoform g CAPN1 0.035 calpain 1, large subunit CAPN3 0.031 calpain 3 isoform f CAPN3 0.031 calpain 3 isoform a CAPN3 0.031 calpain 3 isoform b CAPN3 0.031 calpain 3 isoform d CAPN3 0.031 calpain 3 isoform c CAPN8 0.028 calpain 8 CAPN11 0.024 calpain 11 CAPN12 0.024 calpain 12 CAPN7 0.024 calpain 7 CAPN13 0.020 calpain 13 CAPN2 0.020 calpain 2 isoform 1 CAPN2 0.020 calpain 2 isoform 2 ZNF114 0.020 zinc finger protein 114 CAPN9 0.012 calpain 9 isoform 2 CAPN9 0.012 calpain 9 isoform 1 MEF2D 0.012 myocyte enhancer factor 2D WFDC3 0.012 WAP four-disulfide core domain 3 precursor KCNIP3 0.008 Kv channel interacting protein 3 isoform 1 COG2 0.008 component of oligomeric golgi complex 2 isoform 2 [... COG2 0.008 component of oligomeric golgi complex 2 isoform 1 [Ho... C7orf70 0.008 hypothetical protein LOC84792 SH2D6 0.008 SH2 domain containing 6 OR51D1 0.008 olfactory receptor, family 51, subfamily D, member 1... FLNC 0.004 gamma filamin isoform b FLNC 0.004 gamma filamin isoform a Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.