Guide to the Human Genome
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Name: FOXO6 Sequence: fasta or formatted (589aa) NCBI GI: 239747320
Description:

PREDICTED: forkhead box protein O6

Referenced in:

FOX Family

Other entries for this name:
alt prot [492aa] PREDICTED: forkhead box protein O6
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            14.1         83           5
 C cysteine            1.7         10           1
 D aspartate           5.8         34           1
 E glutamate           5.3         31           2
 F phenylalanine       3.2         19           1
 G glycine            12.9         76           3
 H histidine           1.5          9           2
 I isoleucine          1.5          9           2
 K lysine              3.1         18           2
 L leucine             8.5         50           3
 M methionine          1.9         11           1
 N asparagine          1.9         11           1
 P proline            11.7         69           5
 Q glutamine           3.6         21           1
 R arginine            5.6         33           2
 S serine              6.8         40           3
 T threonine           3.1         18           1
 V valine              3.9         23           2
 W tryptophan          2.4         14           1
 Y tyrosine            1.7         10           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   PREDICTED: forkhead box protein O6 
FOXO6                 0.258   PREDICTED: forkhead box protein O6 
LOC100131908          0.210   PREDICTED: similar to forkhead box O6 
FOXO4                 0.137   forkhead box O4 
FOXO3                 0.099   forkhead box O3A 
FOXO3                 0.099   forkhead box O3A 
FOXO1                 0.096   forkhead box O1 
FOXA1                 0.026   forkhead box A1 
FOXI2                 0.024   forkhead box I2 
COL11A2               0.022   collagen, type XI, alpha 2 isoform 2 preproprotein ...
COL11A2               0.022   collagen, type XI, alpha 2 isoform 3 preproprotein ...
COL11A2               0.022   collagen, type XI, alpha 2 isoform 1 preproprotein ...
FOXL1                 0.022   forkhead box L1 
TAF4                  0.021   TBP-associated factor 4 
FOXJ3                 0.021   forkhead box J3 
COL9A3                0.020   alpha 3 type IX collagen 
FOXJ2                 0.020   forkhead box J2 
RANBP9                0.019   RAN binding protein 9 
KDM6B                 0.019   lysine (K)-specific demethylase 6B 
FOXD2                 0.019   forkhead box D2 
COL4A2                0.018   alpha 2 type IV collagen preproprotein 
COL1A1                0.018   alpha 1 type I collagen preproprotein 
COL2A1                0.018   collagen, type II, alpha 1 isoform 1 precursor [Hom...
COL2A1                0.018   collagen, type II, alpha 1 isoform 2 precursor [Hom...
FMN2                  0.018   formin 2 
PELP1                 0.018   proline, glutamic acid and leucine rich protein 1 [...
FOXA3                 0.018   forkhead box A3 
COL11A1               0.017   alpha 1 type XI collagen isoform B preproprotein [Ho...
COL11A1               0.017   alpha 1 type XI collagen isoform C preproprotein [Ho...
COL11A1               0.017   alpha 1 type XI collagen isoform A preproprotein [Ho...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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