Guide to the Human Genome
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Name: FOXJ2 Sequence: fasta or formatted (574aa) NCBI GI: 8923842
Description:

forkhead box J2

Referenced in:

FOX Family

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.3         42           2
 C cysteine            1.4          8           1
 D aspartate           5.1         29           3
 E glutamate           3.7         21           2
 F phenylalanine       2.3         13           1
 G glycine             7.7         44           2
 H histidine           4.0         23           2
 I isoleucine          3.7         21           1
 K lysine              3.7         21           2
 L leucine             5.7         33           2
 M methionine          2.1         12           1
 N asparagine          4.4         25           2
 P proline            13.6         78           4
 Q glutamine           8.9         51           8
 R arginine            3.5         20           2
 S serine             11.8         68           5
 T threonine           4.2         24           1
 V valine              2.1         12           1
 W tryptophan          1.6          9           1
 Y tyrosine            3.5         20           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   forkhead box J2 
FOXJ3                 0.269   forkhead box J3 
FOXC2                 0.092   forkhead box C2 
FOXJ1                 0.084   forkhead box J1 
FOXI3                 0.083   forkhead box I3 
FOXI2                 0.082   forkhead box I2 
FOXI1                 0.081   forkhead box I1 isoform a 
FOXC1                 0.080   forkhead box C1 
FOXL1                 0.075   forkhead box L1 
FOXA3                 0.074   forkhead box A3 
FOXA2                 0.072   forkhead box A2 isoform 2 
FOXA2                 0.072   forkhead box A2 isoform 1 
FOXA1                 0.071   forkhead box A1 
FOXF2                 0.071   forkhead box F2 
FOXG1                 0.070   forkhead box G1 
FOXF1                 0.070   forkhead box F1 
FOXD2                 0.070   forkhead box D2 
FOXD3                 0.069   forkhead box D3 
FOXL2                 0.068   forkhead box L2 
FOXK2                 0.068   forkhead box K2 
FOXE1                 0.067   forkhead box E1 
FOXK1                 0.066   forkhead box K1 
FOXS1                 0.066   forkhead box S1 
FOXN3                 0.065   checkpoint suppressor 1 isoform 1 
FOXN3                 0.065   checkpoint suppressor 1 isoform 2 
FOXD1                 0.064   forkhead box D1 
FOXB1                 0.064   forkhead box B1 
LOC651986             0.064   PREDICTED: similar to forkhead box L2 
LOC651986             0.064   PREDICTED: similar to forkhead box L2 
LOC651986             0.064   PREDICTED: similar to forkhead box L2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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