Guide to the Human Genome
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Name: FOXI2 Sequence: fasta or formatted (318aa) NCBI GI: 195947376
Description:

forkhead box I2

Referenced in:

FOX Family

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            15.1         48           3
 C cysteine            1.6          5           1
 D aspartate           3.8         12           2
 E glutamate           3.1         10           1
 F phenylalanine       3.8         12           1
 G glycine            11.6         37           3
 H histidine           1.6          5           1
 I isoleucine          1.3          4           1
 K lysine              3.1         10           2
 L leucine             9.7         31           2
 M methionine          1.3          4           1
 N asparagine          3.1         10           1
 P proline            11.6         37           2
 Q glutamine           3.5         11           2
 R arginine            5.3         17           2
 S serine              9.1         29           2
 T threonine           3.5         11           1
 V valine              2.8          9           1
 W tryptophan          1.3          4           1
 Y tyrosine            3.8         12           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   forkhead box I2 
FOXI1                 0.389   forkhead box I1 isoform a 
FOXI3                 0.346   forkhead box I3 
FOXI1                 0.264   forkhead box I1 isoform b 
FOXC1                 0.229   forkhead box C1 
FOXD1                 0.227   forkhead box D1 
FOXD2                 0.212   forkhead box D2 
FOXD3                 0.212   forkhead box D3 
FOXL1                 0.210   forkhead box L1 
FOXE3                 0.207   forkhead box E3 
FOXC2                 0.204   forkhead box C2 
FOXA2                 0.201   forkhead box A2 isoform 2 
FOXA2                 0.201   forkhead box A2 isoform 1 
FOXS1                 0.201   forkhead box S1 
FOXF2                 0.194   forkhead box F2 
FOXE1                 0.191   forkhead box E1 
FOXL2                 0.190   forkhead box L2 
FOXA3                 0.186   forkhead box A3 
FOXF1                 0.185   forkhead box F1 
FOXA1                 0.180   forkhead box A1 
FOXG1                 0.180   forkhead box G1 
FOXQ1                 0.179   forkhead box Q1 
LOC651986             0.177   PREDICTED: similar to forkhead box L2 
LOC651986             0.177   PREDICTED: similar to forkhead box L2 
FOXD4L3               0.177   forkhead box D4-like 3 
FOXD4L2               0.177   forkhead box D4-like 2 
FOXD4L5               0.177   forkhead box D4-like 5 
FOXD4L6               0.177   forkhead box D4-like 6 
FOXD4L4               0.177   forkhead box D4-like 4 
FOXD4L1               0.175   forkhead box D4-like 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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