Guide to the Human Genome
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Name: FOXO1 Sequence: fasta or formatted (655aa) NCBI GI: 9257222
Description:

forkhead box O1

Referenced in:

FOX Family

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.7         57           8
 C cysteine            1.1          7           1
 D aspartate           4.7         31           2
 E glutamate           3.5         23           2
 F phenylalanine       2.4         16           1
 G glycine             7.2         47           2
 H histidine           2.6         17           1
 I isoleucine          2.1         14           2
 K lysine              3.8         25           3
 L leucine             7.3         48           2
 M methionine          4.3         28           2
 N asparagine          5.8         38           2
 P proline            10.7         70           4
 Q glutamine           4.9         32           2
 R arginine            3.5         23           3
 S serine             15.0         98           4
 T threonine           5.0         33           3
 V valine              4.0         26           2
 W tryptophan          1.4          9           2
 Y tyrosine            2.0         13           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   forkhead box O1 
FOXO3                 0.359   forkhead box O3A 
FOXO3                 0.359   forkhead box O3A 
FOXO4                 0.238   forkhead box O4 
FOXO6                 0.194   PREDICTED: forkhead box protein O6 
LOC100131908          0.188   PREDICTED: similar to forkhead box O6 
FOXO6                 0.088   PREDICTED: forkhead box protein O6 
FOXI3                 0.058   forkhead box I3 
FOXG1                 0.056   forkhead box G1 
FOXJ3                 0.056   forkhead box J3 
FOXC1                 0.049   forkhead box C1 
FOXA1                 0.048   forkhead box A1 
FOXD2                 0.047   forkhead box D2 
FOXI2                 0.047   forkhead box I2 
FOXJ2                 0.046   forkhead box J2 
FOXQ1                 0.045   forkhead box Q1 
FOXC2                 0.044   forkhead box C2 
FOXF2                 0.044   forkhead box F2 
FOXD1                 0.043   forkhead box D1 
FOXA3                 0.043   forkhead box A3 
FOXL2                 0.042   forkhead box L2 
FOXA2                 0.042   forkhead box A2 isoform 2 
FOXA2                 0.042   forkhead box A2 isoform 1 
FOXK2                 0.040   forkhead box K2 
FOXM1                 0.039   forkhead box M1 isoform 3 
FOXM1                 0.039   forkhead box M1 isoform 2 
FOXM1                 0.039   forkhead box M1 isoform 1 
FOXL1                 0.038   forkhead box L1 
FOXE1                 0.038   forkhead box E1 
FOXI1                 0.038   forkhead box I1 isoform a 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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