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Search of human proteins with 239745648
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239745648 PREDICTED: similar to predicted protein [Homo
sapiens]
(193 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239751163 PREDICTED: hypothetical protein [Homo sapiens] 416 e-117
gi|239745648 PREDICTED: similar to predicted protein [Homo sapiens] 416 e-117
gi|18079216 CASK interacting protein 1 [Homo sapiens] 46 2e-05
gi|21040326 SON DNA-binding protein isoform F [Homo sapiens] 38 0.005
gi|21040314 SON DNA-binding protein isoform B [Homo sapiens] 38 0.005
gi|134031945 SCO-spondin [Homo sapiens] 38 0.006
gi|38490568 keratin associated protein 10-4 [Homo sapiens] 38 0.006
gi|63053515 keratin associated protein 10-3 [Homo sapiens] 37 0.008
gi|239752594 PREDICTED: hypothetical protein, partial [Homo sapi... 37 0.014
gi|224548950 hypothetical protein LOC644844 [Homo sapiens] 36 0.018
gi|239756142 PREDICTED: hypothetical protein XP_002344837 [Homo ... 36 0.023
gi|239750701 PREDICTED: hypothetical protein [Homo sapiens] 36 0.023
gi|239746604 PREDICTED: similar to Keratin-associated protein 10... 36 0.023
gi|88702793 slit-like 2 [Homo sapiens] 35 0.030
gi|238859649 keratin associated protein 10-8 [Homo sapiens] 35 0.040
gi|154759251 keratin associated protein 10-9 [Homo sapiens] 35 0.040
gi|154759249 keratin associated protein 10-11 [Homo sapiens] 35 0.040
gi|38490571 keratin associated protein 10-7 [Homo sapiens] 35 0.040
gi|163965366 nascent polypeptide-associated complex alpha subuni... 35 0.040
gi|115495445 ankyrin repeat domain 30A [Homo sapiens] 35 0.052
gi|239752100 PREDICTED: hypothetical protein [Homo sapiens] 35 0.052
gi|67782356 corneodesmosin precursor [Homo sapiens] 35 0.052
gi|63053512 keratin associated protein 10-1 [Homo sapiens] 35 0.052
gi|38490587 keratin associated protein 10-12 [Homo sapiens] 35 0.052
gi|20070163 voltage-dependent calcium channel alpha 1G subunit i... 34 0.068
gi|38505292 voltage-dependent calcium channel alpha 1G subunit i... 34 0.068
gi|38505290 voltage-dependent calcium channel alpha 1G subunit i... 34 0.068
gi|38505288 voltage-dependent calcium channel alpha 1G subunit i... 34 0.068
gi|38505286 voltage-dependent calcium channel alpha 1G subunit i... 34 0.068
gi|38505284 voltage-dependent calcium channel alpha 1G subunit i... 34 0.068
>gi|239751163 PREDICTED: hypothetical protein [Homo sapiens]
Length = 193
Score = 416 bits (1068), Expect = e-117
Identities = 193/193 (100%), Positives = 193/193 (100%)
Query: 1 MEHLCATMDLLTQPFCAPWELPLCDSPLDPPPQRLTHLPAALHRKLLIDSHFLIPPRFSP 60
MEHLCATMDLLTQPFCAPWELPLCDSPLDPPPQRLTHLPAALHRKLLIDSHFLIPPRFSP
Sbjct: 1 MEHLCATMDLLTQPFCAPWELPLCDSPLDPPPQRLTHLPAALHRKLLIDSHFLIPPRFSP 60
Query: 61 RLPPETALTRPHLARHGGPLEFLCLLGLCSPQGILCHSSTQLLNLGAPELSRAHRLPREL 120
RLPPETALTRPHLARHGGPLEFLCLLGLCSPQGILCHSSTQLLNLGAPELSRAHRLPREL
Sbjct: 61 RLPPETALTRPHLARHGGPLEFLCLLGLCSPQGILCHSSTQLLNLGAPELSRAHRLPREL 120
Query: 121 GQLLAPPDLCDPTSSGCPDLCDPTSRGSPDLCDPTSSGSPDLCAPTSSGSPDLCAPTSSG 180
GQLLAPPDLCDPTSSGCPDLCDPTSRGSPDLCDPTSSGSPDLCAPTSSGSPDLCAPTSSG
Sbjct: 121 GQLLAPPDLCDPTSSGCPDLCDPTSRGSPDLCDPTSSGSPDLCAPTSSGSPDLCAPTSSG 180
Query: 181 SPDLCAPTSSGSP 193
SPDLCAPTSSGSP
Sbjct: 181 SPDLCAPTSSGSP 193
>gi|239745648 PREDICTED: similar to predicted protein [Homo sapiens]
Length = 193
Score = 416 bits (1068), Expect = e-117
Identities = 193/193 (100%), Positives = 193/193 (100%)
Query: 1 MEHLCATMDLLTQPFCAPWELPLCDSPLDPPPQRLTHLPAALHRKLLIDSHFLIPPRFSP 60
MEHLCATMDLLTQPFCAPWELPLCDSPLDPPPQRLTHLPAALHRKLLIDSHFLIPPRFSP
Sbjct: 1 MEHLCATMDLLTQPFCAPWELPLCDSPLDPPPQRLTHLPAALHRKLLIDSHFLIPPRFSP 60
Query: 61 RLPPETALTRPHLARHGGPLEFLCLLGLCSPQGILCHSSTQLLNLGAPELSRAHRLPREL 120
RLPPETALTRPHLARHGGPLEFLCLLGLCSPQGILCHSSTQLLNLGAPELSRAHRLPREL
Sbjct: 61 RLPPETALTRPHLARHGGPLEFLCLLGLCSPQGILCHSSTQLLNLGAPELSRAHRLPREL 120
Query: 121 GQLLAPPDLCDPTSSGCPDLCDPTSRGSPDLCDPTSSGSPDLCAPTSSGSPDLCAPTSSG 180
GQLLAPPDLCDPTSSGCPDLCDPTSRGSPDLCDPTSSGSPDLCAPTSSGSPDLCAPTSSG
Sbjct: 121 GQLLAPPDLCDPTSSGCPDLCDPTSRGSPDLCDPTSSGSPDLCAPTSSGSPDLCAPTSSG 180
Query: 181 SPDLCAPTSSGSP 193
SPDLCAPTSSGSP
Sbjct: 181 SPDLCAPTSSGSP 193
>gi|18079216 CASK interacting protein 1 [Homo sapiens]
Length = 1431
Score = 46.2 bits (108), Expect = 2e-05
Identities = 50/180 (27%), Positives = 62/180 (34%), Gaps = 38/180 (21%)
Query: 18 PWELPLCDSPLDPPPQRLTHLPAALHRKLLIDSHFLIPPRFSPRLP------PETALTRP 71
P ELP P +PPP L HLP L PP R P P+ LT+P
Sbjct: 1188 PPELPPPPPPAEPPPTDLAHLPP------------LPPPEGEARKPAKPPVSPKPVLTQP 1235
Query: 72 HLARHGGPLEFLCLLGLCSPQGILCHSSTQLLNLGAPELSRAHRLPRELGQLLAPPDLCD 131
G P + L P G+PE+ RAH P + PP
Sbjct: 1236 VPKLQGSPTPTSKKVPLPGP--------------GSPEVKRAHGTPPPVSPKPPPPPTAP 1281
Query: 132 ---PTSSGCPD-LCDPTSRGSPDLCDPTSSGSPDLCAPTSSGSPDLCAPTSSGSPDLCAP 187
+G P P+ SP P + P P+ SP P S G+P L P
Sbjct: 1282 KPVKAVAGLPSGSAGPSPAPSPARQPPAALAKPPGTPPSLGASP--AKPPSPGAPALHVP 1339
>gi|21040326 SON DNA-binding protein isoform F [Homo sapiens]
Length = 2426
Score = 38.1 bits (87), Expect = 0.005
Identities = 22/86 (25%), Positives = 42/86 (48%)
Query: 108 PELSRAHRLPRELGQLLAPPDLCDPTSSGCPDLCDPTSRGSPDLCDPTSSGSPDLCAPTS 167
PEL + L + + + +L P ++ P+L P +L P+++ P+L P S
Sbjct: 362 PELPKTTALELQESSVASAMELPGPPATSMPELQGPPVTPVLELPGPSATPVPELPGPLS 421
Query: 168 SGSPDLCAPTSSGSPDLCAPTSSGSP 193
+ P+L P ++ P+L P+ + P
Sbjct: 422 TPVPELPGPPATAVPELPGPSVTPVP 447
Score = 32.3 bits (72), Expect = 0.26
Identities = 25/94 (26%), Positives = 42/94 (44%), Gaps = 2/94 (2%)
Query: 91 PQGILCHSSTQLLNLGAPELSRAHRLPRELGQLLAPPDLCDPTSSGCPDLCDPTSRGSPD 150
PQ + T L L ++ A LP + P+L P + +L P++ P+
Sbjct: 358 PQELPELPKTTALELQESSVASAMELPGPPATSM--PELQGPPVTPVLELPGPSATPVPE 415
Query: 151 LCDPTSSGSPDLCAPTSSGSPDLCAPTSSGSPDL 184
L P S+ P+L P ++ P+L P+ + P L
Sbjct: 416 LPGPLSTPVPELPGPPATAVPELPGPSVTPVPQL 449
>gi|21040314 SON DNA-binding protein isoform B [Homo sapiens]
Length = 2303
Score = 38.1 bits (87), Expect = 0.005
Identities = 22/86 (25%), Positives = 42/86 (48%)
Query: 108 PELSRAHRLPRELGQLLAPPDLCDPTSSGCPDLCDPTSRGSPDLCDPTSSGSPDLCAPTS 167
PEL + L + + + +L P ++ P+L P +L P+++ P+L P S
Sbjct: 362 PELPKTTALELQESSVASAMELPGPPATSMPELQGPPVTPVLELPGPSATPVPELPGPLS 421
Query: 168 SGSPDLCAPTSSGSPDLCAPTSSGSP 193
+ P+L P ++ P+L P+ + P
Sbjct: 422 TPVPELPGPPATAVPELPGPSVTPVP 447
Score = 32.3 bits (72), Expect = 0.26
Identities = 25/94 (26%), Positives = 42/94 (44%), Gaps = 2/94 (2%)
Query: 91 PQGILCHSSTQLLNLGAPELSRAHRLPRELGQLLAPPDLCDPTSSGCPDLCDPTSRGSPD 150
PQ + T L L ++ A LP + P+L P + +L P++ P+
Sbjct: 358 PQELPELPKTTALELQESSVASAMELPGPPATSM--PELQGPPVTPVLELPGPSATPVPE 415
Query: 151 LCDPTSSGSPDLCAPTSSGSPDLCAPTSSGSPDL 184
L P S+ P+L P ++ P+L P+ + P L
Sbjct: 416 LPGPLSTPVPELPGPPATAVPELPGPSVTPVPQL 449
>gi|134031945 SCO-spondin [Homo sapiens]
Length = 5147
Score = 37.7 bits (86), Expect = 0.006
Identities = 31/99 (31%), Positives = 37/99 (37%), Gaps = 14/99 (14%)
Query: 78 GPLEFLCLLGLCSPQGILCHSSTQLLN----LGAPELSRAHRLPRELG-QLLAPPDLCDP 132
GP EF C G C+P+G C + G H P G ++P LCD
Sbjct: 1566 GPFEFRCGSGECTPRGWRCDQEEDCADGSDERGCGGPCAPHHAPCARGPHCVSPEQLCDG 1625
Query: 133 TSSGCPDLCDPTSRGSPDLCDPTSSGSPDLCAPTSSGSP 171
CPD D PD C G P L P +G P
Sbjct: 1626 VRQ-CPDGSDE----GPDAC----GGLPALGGPNRTGLP 1655
>gi|38490568 keratin associated protein 10-4 [Homo sapiens]
Length = 401
Score = 37.7 bits (86), Expect = 0.006
Identities = 27/76 (35%), Positives = 28/76 (36%), Gaps = 17/76 (22%)
Query: 127 PDLCDPTSSGCPDLCDPTSRGSP-----DLCDPTSSGS--------PDLCAPTSSGSPDL 173
P C P SG C S P C P+SS S P C P P
Sbjct: 325 PVSCVPVCSGASSSCCQQSSCQPACCTTSCCRPSSSVSLLCRPVCRPACCVPV----PSC 380
Query: 174 CAPTSSGSPDLCAPTS 189
CAPTSS P C P S
Sbjct: 381 CAPTSSCQPSCCRPAS 396
Score = 34.3 bits (77), Expect = 0.068
Identities = 32/113 (28%), Positives = 39/113 (34%), Gaps = 4/113 (3%)
Query: 83 LCLLGLCSPQGILC--HSSTQLLNLGAPELSRAHRLPRELGQLLAPPDLCDPTSSGCPDL 140
+C +CS C SS Q + +A +P + P P SG L
Sbjct: 237 VCCKPVCSEDSSSCCQQSSCQPACCTSSPCQQACCVPVCCKPVCCKPVGSVPICSGASSL 296
Query: 141 CDPTSRGSPDLCDPTSSGSPDLCAPTSSGSPDLCAPTSSGSPDLCAPTSSGSP 193
C S P C TSS S C P C P SG+ C SS P
Sbjct: 297 CCQQSSCQPACC--TSSQSQQGCCVPVCCKPVSCVPVCSGASSSCCQQSSCQP 347
Score = 31.2 bits (69), Expect = 0.57
Identities = 20/63 (31%), Positives = 24/63 (38%), Gaps = 6/63 (9%)
Query: 135 SGCPDLCDPTSRGSPDLCDPTSSGSPDLCAPTSSGSPDLCAPTSSGSP-----DLCAPTS 189
S C C +S+ C P P C P SG+ C SS P C P+S
Sbjct: 301 SSCQPACCTSSQSQQGCCVPVCC-KPVSCVPVCSGASSSCCQQSSCQPACCTTSCCRPSS 359
Query: 190 SGS 192
S S
Sbjct: 360 SVS 362
Score = 30.8 bits (68), Expect = 0.75
Identities = 23/72 (31%), Positives = 27/72 (37%), Gaps = 6/72 (8%)
Query: 127 PDLCDPTSSG-----CPDLCDPTSRGSPDLCDPTSSGSPDLCAPTSSGSPDLCAPTSSGS 181
P CD S CP+ C +P C P S +C P S S C T S
Sbjct: 17 PGSCDSCSDSWQVDDCPESCCEPPCCAPSCCAPAPCLSL-VCTPVSRVSSPCCPVTCEPS 75
Query: 182 PDLCAPTSSGSP 193
P TSS +P
Sbjct: 76 PCQSGCTSSCTP 87
Score = 29.6 bits (65), Expect = 1.7
Identities = 21/64 (32%), Positives = 25/64 (39%), Gaps = 2/64 (3%)
Query: 126 PPDLCDPTSSGCPDLCDPTSRGSPDLCDPTSSGSPDLCAPTSSGSPDLCAPTSSGSPDLC 185
P C+P P C P S +C P S S C T SP TSS +P C
Sbjct: 33 PESCCEPPCCA-PSCCAPAPCLSL-VCTPVSRVSSPCCPVTCEPSPCQSGCTSSCTPSCC 90
Query: 186 APTS 189
+S
Sbjct: 91 QQSS 94
>gi|63053515 keratin associated protein 10-3 [Homo sapiens]
Length = 221
Score = 37.4 bits (85), Expect = 0.008
Identities = 26/67 (38%), Positives = 29/67 (43%), Gaps = 7/67 (10%)
Query: 130 CDPTSSGCPDLCDPTSRGS-----PDLCDPTSSGSPDLCAPTSSGSPDLCAPTSSGSPDL 184
C P+SS LC P R + P C P S+ P C P S S LC PT S
Sbjct: 152 CRPSSS-VSLLCRPVCRSTCCVPIPSCCAPASTCQPSCCRPASCVSL-LCRPTCSRLSSA 209
Query: 185 CAPTSSG 191
C SSG
Sbjct: 210 CCGLSSG 216
Score = 35.4 bits (80), Expect = 0.030
Identities = 28/84 (33%), Positives = 30/84 (35%), Gaps = 21/84 (25%)
Query: 127 PDLCDPTSSGCPDLCDPTSRGSP-----DLCDPTSSGS---------------PDLCAPT 166
P C P SG C S P C P+SS S P CAP
Sbjct: 122 PICCVPVCSGASSSCCQQSSRQPACCTTSCCRPSSSVSLLCRPVCRSTCCVPIPSCCAPA 181
Query: 167 SSGSPDLCAPTSSGSPDLCAPTSS 190
S+ P C P S S LC PT S
Sbjct: 182 STCQPSCCRPASCVSL-LCRPTCS 204
Score = 34.7 bits (78), Expect = 0.052
Identities = 24/62 (38%), Positives = 25/62 (40%), Gaps = 6/62 (9%)
Query: 129 LCDPT--SSGC---PDLCDPTSRGSPDLCDPTSSGSPDLCAPTSSGSPDLCAPTSSGSPD 183
LC P S+ C P C P S P C P S S LC PT S C SSG
Sbjct: 161 LCRPVCRSTCCVPIPSCCAPASTCQPSCCRPASCVSL-LCRPTCSRLSSACCGLSSGQKS 219
Query: 184 LC 185
C
Sbjct: 220 SC 221
Score = 30.8 bits (68), Expect = 0.75
Identities = 26/92 (28%), Positives = 30/92 (32%), Gaps = 22/92 (23%)
Query: 122 QLLAPPDLCDPTSSGCPDLCDPTSRGSPDLCDPTSSGSPDLCAPTSSGSP-----DLCAP 176
Q P C P C +C P C P SG+ C SS P C P
Sbjct: 97 QACCVPVCCKPVC--CVPVCCKPVCCKPICCVPVCSGASSSCCQQSSRQPACCTTSCCRP 154
Query: 177 TSSGS---------------PDLCAPTSSGSP 193
+SS S P CAP S+ P
Sbjct: 155 SSSVSLLCRPVCRSTCCVPIPSCCAPASTCQP 186
>gi|239752594 PREDICTED: hypothetical protein, partial [Homo
sapiens]
Length = 673
Score = 36.6 bits (83), Expect = 0.014
Identities = 48/141 (34%), Positives = 59/141 (41%), Gaps = 34/141 (24%)
Query: 55 PPRFSPRLPPETA-LTR-PHLARHGGPLEFLCLLGLCSPQGILCHSS-TQLLNLGAPELS 111
PPR SP P TA LTR P A SP G+L +S T++ + +P
Sbjct: 389 PPRASPTGTPSTASLTRKPPRA---------------SPTGMLSRTSITKMDSTASPT-- 431
Query: 112 RAHRLPRELGQLLAPPDLCDPTSSGCPDLCDPTSRGSPDLCDPTSSGSPDLCAPTSSGSP 171
R P PP PT G P PT G+ PT GSP +PT GSP
Sbjct: 432 ---RTPPRASPTGTPPR-ASPT--GTPSRASPT--GTQSTASPT--GSPSTASPT--GSP 479
Query: 172 DLCAPTSSGSPDLCAPTSSGS 192
+PT GSP + T + S
Sbjct: 480 STASPT--GSPSRASLTRTPS 498
>gi|224548950 hypothetical protein LOC644844 [Homo sapiens]
Length = 82
Score = 36.2 bits (82), Expect = 0.018
Identities = 17/57 (29%), Positives = 17/57 (29%)
Query: 126 PPDLCDPTSSGCPDLCDPTSRGSPDLCDPTSSGSPDLCAPTSSGSPDLCAPTSSGSP 182
PP C P P C P P C P P C P P C P P
Sbjct: 17 PPGHCGPPPGHGPGPCGPPPHHGPGPCGPPPGHGPGPCGPPPHHGPGPCGPPPGHGP 73
Score = 33.9 bits (76), Expect = 0.088
Identities = 16/56 (28%), Positives = 16/56 (28%)
Query: 138 PDLCDPTSRGSPDLCDPTSSGSPDLCAPTSSGSPDLCAPTSSGSPDLCAPTSSGSP 193
P C P P C P P C P P C P P C P P
Sbjct: 18 PGHCGPPPGHGPGPCGPPPHHGPGPCGPPPGHGPGPCGPPPHHGPGPCGPPPGHGP 73
>gi|239756142 PREDICTED: hypothetical protein XP_002344837 [Homo
sapiens]
Length = 208
Score = 35.8 bits (81), Expect = 0.023
Identities = 19/74 (25%), Positives = 32/74 (43%)
Query: 120 LGQLLAPPDLCDPTSSGCPDLCDPTSRGSPDLCDPTSSGSPDLCAPTSSGSPDLCAPTSS 179
LG + P + S+G L P+ +G P P+ +G P P+ +G P+ +
Sbjct: 97 LGPAVLDPSMWVTPSTGGSILLKPSMKGHPSAIAPSVNGHPSEITPSMNGHASELKPSRN 156
Query: 180 GSPDLCAPTSSGSP 193
G P+ +G P
Sbjct: 157 GCSSEITPSVNGHP 170
Score = 30.4 bits (67), Expect = 0.98
Identities = 16/65 (24%), Positives = 25/65 (38%)
Query: 129 LCDPTSSGCPDLCDPTSRGSPDLCDPTSSGSPDLCAPTSSGSPDLCAPTSSGSPDLCAPT 188
L P+ G P P+ G P P+ +G P+ +G P+ +G P
Sbjct: 117 LLKPSMKGHPSAIAPSVNGHPSEITPSMNGHASELKPSRNGCSSEITPSVNGHPSEITQP 176
Query: 189 SSGSP 193
+G P
Sbjct: 177 VNGHP 181
>gi|239750701 PREDICTED: hypothetical protein [Homo sapiens]
Length = 208
Score = 35.8 bits (81), Expect = 0.023
Identities = 19/74 (25%), Positives = 32/74 (43%)
Query: 120 LGQLLAPPDLCDPTSSGCPDLCDPTSRGSPDLCDPTSSGSPDLCAPTSSGSPDLCAPTSS 179
LG + P + S+G L P+ +G P P+ +G P P+ +G P+ +
Sbjct: 97 LGPAVLDPSMWVTPSTGGSILLKPSMKGHPSAIAPSVNGHPSEITPSMNGHASELKPSRN 156
Query: 180 GSPDLCAPTSSGSP 193
G P+ +G P
Sbjct: 157 GCSSEITPSVNGHP 170
Score = 30.4 bits (67), Expect = 0.98
Identities = 16/65 (24%), Positives = 25/65 (38%)
Query: 129 LCDPTSSGCPDLCDPTSRGSPDLCDPTSSGSPDLCAPTSSGSPDLCAPTSSGSPDLCAPT 188
L P+ G P P+ G P P+ +G P+ +G P+ +G P
Sbjct: 117 LLKPSMKGHPSAIAPSVNGHPSEITPSMNGHASELKPSRNGCSSEITPSVNGHPSEITQP 176
Query: 189 SSGSP 193
+G P
Sbjct: 177 VNGHP 181
>gi|239746604 PREDICTED: similar to Keratin-associated protein 10-8
[Homo sapiens]
Length = 312
Score = 35.8 bits (81), Expect = 0.023
Identities = 26/76 (34%), Positives = 27/76 (35%), Gaps = 17/76 (22%)
Query: 127 PDLCDPTSSGCPDLCDPTSRGSP-----DLCDPTSSGS--------PDLCAPTSSGSPDL 173
P C P SG LC S P C P+SS S P C P P
Sbjct: 226 PVCCVPVCSGASSLCCQQSSCQPACCTSSCCRPSSSVSLLCHPVCRPTCCMPV----PSC 281
Query: 174 CAPTSSGSPDLCAPTS 189
CAP S P C P S
Sbjct: 282 CAPAFSCQPSCCHPAS 297
Score = 34.7 bits (78), Expect = 0.052
Identities = 23/68 (33%), Positives = 27/68 (39%), Gaps = 7/68 (10%)
Query: 130 CDPTSSGCPDLCDPTSRGSPDLCDPTSSGS----PDLCAPTSSGSPDLCAPTSSGSPDLC 185
C+P+S C LC S P C + S P C P P C P SG+ LC
Sbjct: 184 CEPSS--CTPLCCQQSSCQPACCTSSPSQQSCCVPVCCKPVCC-KPVCCVPVCSGASSLC 240
Query: 186 APTSSGSP 193
SS P
Sbjct: 241 CQQSSCQP 248
Score = 32.7 bits (73), Expect = 0.20
Identities = 33/117 (28%), Positives = 40/117 (34%), Gaps = 15/117 (12%)
Query: 84 CLLGLCSPQGILCHSSTQLLNLGAPELSRAHRLPRELGQLLAPPDLCDPT--------SS 135
C C+P L T + + +P A P L C P S
Sbjct: 154 CAASCCAPAPCLTLVCTPVSCVSSPCCQAACE-PSSCTPLCCQQSSCQPACCTSSPSQQS 212
Query: 136 GCPDLCDPTSRGSPDLCDPTSSGSPDLCAPTSSGSPDLCAPTSSGSPDLCAPTSSGS 192
C +C P C P SG+ LC SS P C TSS C P+SS S
Sbjct: 213 CCVPVCCKPVCCKPVCCVPVCSGASSLCCQQSSCQPACC--TSS----CCRPSSSVS 263
>gi|88702793 slit-like 2 [Homo sapiens]
Length = 673
Score = 35.4 bits (80), Expect = 0.030
Identities = 40/131 (30%), Positives = 55/131 (41%), Gaps = 24/131 (18%)
Query: 73 LARHGGPLEFLCLLGLCSPQGILCHSSTQLLNLGAPELSRAHRLPRELGQLLAPPDLCDP 132
LA P +C L P H + L +PE +R H P+ G+LL D D
Sbjct: 293 LAAARNPFNCVCPLSWFGPWVRESH-----VTLASPEETRCHFPPKNAGRLLLELDYAD- 346
Query: 133 TSSGCPDLCD----PTSRGSPDLCDPT---SSGSPDLCAP----TSSGSPDLCAPTSSG- 180
GCP PT+R P + +PT SS +P +P T + SP AP + G
Sbjct: 347 --FGCPATTTTATVPTTR--PVVREPTALSSSLAPTWLSPTEPATEAPSPPSTAPPTVGP 402
Query: 181 --SPDLCAPTS 189
P C P++
Sbjct: 403 VPQPQDCPPST 413
>gi|238859649 keratin associated protein 10-8 [Homo sapiens]
Length = 259
Score = 35.0 bits (79), Expect = 0.040
Identities = 37/130 (28%), Positives = 44/130 (33%), Gaps = 28/130 (21%)
Query: 83 LCLLGLCSPQGILC--HSSTQLLNLGAPELSRAHRLPRELGQLLAPPDLCDPTSSGCPDL 140
+C + +CS C SS Q +A +P + P C P SG L
Sbjct: 132 VCCVSICSGASSPCCQQSSCQSACCTFSPCQQACCVP-----ICCKPICCVPVCSGASSL 186
Query: 141 CDPTSRGSP-----DLCDPTSSGS---------------PDLCAPTSSGSPDLCAPTSSG 180
C S P C P+SS S P C P SS P C P S
Sbjct: 187 CCQKSSCQPACCTTSCCRPSSSVSLLCRPVCRPACCVPVPSCCVPASSCQPSCCHPASCL 246
Query: 181 SPDLCAPTSS 190
S LC P S
Sbjct: 247 S-FLCRPACS 255
Score = 32.0 bits (71), Expect = 0.34
Identities = 25/81 (30%), Positives = 27/81 (33%), Gaps = 20/81 (24%)
Query: 133 TSSGCPDLCDPTSRGSPDLCDPTSSGSPDLCAPTSSGSP-----DLCAPTSSGS------ 181
T S C C P C P SG+ LC SS P C P+SS S
Sbjct: 157 TFSPCQQACCVPICCKPICCVPVCSGASSLCCQKSSCQPACCTTSCCRPSSSVSLLCRPV 216
Query: 182 ---------PDLCAPTSSGSP 193
P C P SS P
Sbjct: 217 CRPACCVPVPSCCVPASSCQP 237
Score = 30.0 bits (66), Expect = 1.3
Identities = 20/77 (25%), Positives = 29/77 (37%), Gaps = 9/77 (11%)
Query: 123 LLAPPDLCDPT--SSGCPDLCDPTSRGSPDLCDPTSSGSP-------DLCAPTSSGSPDL 173
L+ P C+P+ SGC D C P+ + SP +C ++ P
Sbjct: 74 LVCAPVSCEPSPCQSGCTDSCTPSCCQQSSCQPACCTSSPCQQACCVPVCCKSNCCKPVC 133
Query: 174 CAPTSSGSPDLCAPTSS 190
C SG+ C SS
Sbjct: 134 CVSICSGASSPCCQQSS 150
>gi|154759251 keratin associated protein 10-9 [Homo sapiens]
Length = 292
Score = 35.0 bits (79), Expect = 0.040
Identities = 36/130 (27%), Positives = 44/130 (33%), Gaps = 23/130 (17%)
Query: 83 LCLLGLCSPQGILC--HSSTQLLNLGAPELSRAHRLPRELGQLLAPPDLCDPTSSGCPDL 140
+C CS C SS Q + +++ +P + P C P SG L
Sbjct: 149 VCCAPTCSEDSYSCCQQSSCQPACCTSSPCQQSYCVPVCCKPVCCKPICCVPVCSGASSL 208
Query: 141 CDPTSRGSP-----DLCDPTSSGS---------------PDLCAPTSSGSPDLCAPTSSG 180
C S P C P+SS S CAPTSS P C S
Sbjct: 209 CCQQSGCQPACCTTSCCRPSSSVSLLCRPVCRPACCVPVSSCCAPTSSRQPSYCRQASCV 268
Query: 181 SPDLCAPTSS 190
S LC P S
Sbjct: 269 SL-LCRPVCS 277
Score = 32.3 bits (72), Expect = 0.26
Identities = 22/67 (32%), Positives = 24/67 (35%), Gaps = 3/67 (4%)
Query: 127 PDLCDPTSSGCPDLCDPTSRGSPDLCDPTSSGSPDLCAPTSSGSPDLCAPTSSGSPDLCA 186
P C P G C +S C +SS P C P P CAPT S C
Sbjct: 107 PVCCVPVCCGASSCCQQSSY--QPACCASSSCQPACCVPVCC-KPVCCAPTCSEDSYSCC 163
Query: 187 PTSSGSP 193
SS P
Sbjct: 164 QQSSCQP 170
Score = 31.2 bits (69), Expect = 0.57
Identities = 30/93 (32%), Positives = 32/93 (34%), Gaps = 30/93 (32%)
Query: 130 CDP---TSSGC------PDLCDPTSRGSPDLCDPTSSGSPDLCAPTSSGSP-----DLCA 175
C P TSS C P C P P C P SG+ LC S P C
Sbjct: 168 CQPACCTSSPCQQSYCVPVCCKPVCC-KPICCVPVCSGASSLCCQQSGCQPACCTTSCCR 226
Query: 176 PTSSGS---------------PDLCAPTSSGSP 193
P+SS S CAPTSS P
Sbjct: 227 PSSSVSLLCRPVCRPACCVPVSSCCAPTSSRQP 259
Score = 30.4 bits (67), Expect = 0.98
Identities = 24/69 (34%), Positives = 27/69 (39%), Gaps = 10/69 (14%)
Query: 126 PPDLCDP----TSSGCPD-----LCDPTSRGSPDLCDPTSSGSPDLCAPTSSGSPDLCAP 176
P C+P TS P +C P SR S C T SP TSS +P C
Sbjct: 23 PESCCEPPCCATSCCAPAPCLTLVCTPVSRVSSPCCQVTCEPSPCQSGCTSSCTPS-CCQ 81
Query: 177 TSSGSPDLC 185
SS P C
Sbjct: 82 QSSCQPAYC 90
Score = 30.0 bits (66), Expect = 1.3
Identities = 22/61 (36%), Positives = 24/61 (39%), Gaps = 5/61 (8%)
Query: 130 CDP---TSSGCPDLCDPTSRGSPDLCDPTSSGSPDLCAPTSSGSPDLCAPTSSGSPDLCA 186
C P TSS C C P C P G+ C SS P CA +SS P C
Sbjct: 85 CQPAYCTSSPCQQACCVPVCCKPVCCVPVCCGASS-CCQQSSYQPACCA-SSSCQPACCV 142
Query: 187 P 187
P
Sbjct: 143 P 143
Score = 29.6 bits (65), Expect = 1.7
Identities = 19/62 (30%), Positives = 22/62 (35%), Gaps = 6/62 (9%)
Query: 132 PTSSGCPDLCDPT----SRGSPDLCDPTSSGSPDLCAPTSSGSPDLCAPTSSGSPDLCAP 187
P SGC C P+ S P C TSS C P C P G+ C
Sbjct: 66 PCQSGCTSSCTPSCCQQSSCQPAYC--TSSPCQQACCVPVCCKPVCCVPVCCGASSCCQQ 123
Query: 188 TS 189
+S
Sbjct: 124 SS 125
>gi|154759249 keratin associated protein 10-11 [Homo sapiens]
Length = 298
Score = 35.0 bits (79), Expect = 0.040
Identities = 27/61 (44%), Positives = 29/61 (47%), Gaps = 8/61 (13%)
Query: 130 CDPTSSGCPDLCDPTSRGSPDLCDPTSSGSPDLCAPTSSGSPDLCAPTSSGSPDLCAPTS 189
C P+SS LC P R + C P SS CAPTSS C P S S LC P S
Sbjct: 231 CRPSSS-VSLLCHPVCRST--CCVPVSS----CCAPTSSCQSSCCRPASCVSL-LCRPAS 282
Query: 190 S 190
S
Sbjct: 283 S 283
Score = 31.2 bits (69), Expect = 0.57
Identities = 18/51 (35%), Positives = 21/51 (41%), Gaps = 1/51 (1%)
Query: 137 CPDLCDPTSRGSPDLCDPTSSGSPDLCAPTSSGSPDLCAPTSSGSPDLCAP 187
C +C T P C P G+ C SS P CA +SS P C P
Sbjct: 100 CVPVCCKTVCCKPVCCVPVCCGAASSCCRQSSCQPACCA-SSSCQPACCVP 149
Score = 30.0 bits (66), Expect = 1.3
Identities = 20/63 (31%), Positives = 23/63 (36%), Gaps = 9/63 (14%)
Query: 130 CDP---TSSGCPDLCDPTSRGSPDLCDPTSSGSPDLCAPTSSGSPDLCAPTSSGSPDLCA 186
C P TSS C C +C T P C P G+ C SS P CA
Sbjct: 85 CQPACCTSSPCQQAC------CVPVCCKTVCCKPVCCVPVCCGAASSCCRQSSCQPACCA 138
Query: 187 PTS 189
+S
Sbjct: 139 SSS 141
Score = 28.5 bits (62), Expect = 3.7
Identities = 21/62 (33%), Positives = 24/62 (38%), Gaps = 2/62 (3%)
Query: 129 LCDPTSSGCPDLCDPTSRGSPDLCDPTSSGSPDLCAPTSSGSPDLCAPTSSGSPDLCAPT 188
+C T P C P G+ C SS P CA +SS P C P P C T
Sbjct: 103 VCCKTVCCKPVCCVPVCCGAASSCCRQSSCQPACCA-SSSCQPACCVPVCC-KPVCCVST 160
Query: 189 SS 190
S
Sbjct: 161 CS 162
Score = 27.7 bits (60), Expect = 6.3
Identities = 20/64 (31%), Positives = 24/64 (37%), Gaps = 2/64 (3%)
Query: 126 PPDLCDPTSSGCPDLCDPTSRGSPDLCDPTSSGSPDLCAPTSSGSPDLCAPTSSGSPDLC 185
P C+P S P C P S +C P S S C S TSS +P C
Sbjct: 23 PESCCEPPCSA-PSCCAPAPSLSL-VCTPVSCVSSPCCQAACEPSACQSGCTSSCTPSCC 80
Query: 186 APTS 189
+S
Sbjct: 81 QQSS 84
>gi|38490571 keratin associated protein 10-7 [Homo sapiens]
Length = 370
Score = 35.0 bits (79), Expect = 0.040
Identities = 27/70 (38%), Positives = 29/70 (41%), Gaps = 16/70 (22%)
Query: 130 CDPTSSGCPDLCDPTSRGSPDLCDPTSSGSPDLCAPTSSGSPDLCAPTSSGS-------- 181
C P+SS LC P R P C P P CAPTSS C P S S
Sbjct: 303 CRPSSS-VSLLCRPVCR--PACCVPV----PSCCAPTSSCQASCCRPASCVSLLCRPACS 355
Query: 182 -PDLCAPTSS 190
P C PTS+
Sbjct: 356 RPACCGPTST 365
Score = 33.9 bits (76), Expect = 0.088
Identities = 22/71 (30%), Positives = 27/71 (38%), Gaps = 6/71 (8%)
Query: 127 PDLCDPTSSGCPDLCDPTSRGSPDLCDPTSSGSPDLCAPTSSGSPDLCAPTSSGSP---- 182
P D + S C C +S+ C P P C P SG+ C SS P
Sbjct: 241 PTCSDDSGSCCQPACCTSSQSQQGCCVPVCC-KPVCCVPVCSGASTSCCQQSSCQPACCT 299
Query: 183 -DLCAPTSSGS 192
C P+SS S
Sbjct: 300 TSCCRPSSSVS 310
Score = 31.2 bits (69), Expect = 0.57
Identities = 25/79 (31%), Positives = 30/79 (37%), Gaps = 10/79 (12%)
Query: 121 GQLLAPPDLCDPTSSG-----CPDLC--DPTSRGSPDL---CDPTSSGSPDLCAPTSSGS 170
G + P CD S CP+ C P +P L C P S S C T S
Sbjct: 16 GSRVCLPGSCDSCSDSWQVDDCPESCCEPPCCAPAPCLSLVCTPVSYVSSPCCRVTCEPS 75
Query: 171 PDLCAPTSSGSPDLCAPTS 189
P TSS +P C +S
Sbjct: 76 PCQSGCTSSCTPSCCQQSS 94
Score = 30.4 bits (67), Expect = 0.98
Identities = 25/70 (35%), Positives = 26/70 (37%), Gaps = 7/70 (10%)
Query: 130 CDP---TSSGCPDLCDPTSRGSPDLCDPT-SSGSPDLCAP---TSSGSPDLCAPTSSGSP 182
C P TSS C C P C PT S S C P TSS S C P
Sbjct: 214 CKPACCTSSPCQQACCVPVCCKPVCCVPTCSDDSGSCCQPACCTSSQSQQGCCVPVCCKP 273
Query: 183 DLCAPTSSGS 192
C P SG+
Sbjct: 274 VCCVPVCSGA 283
Score = 30.4 bits (67), Expect = 0.98
Identities = 22/60 (36%), Positives = 23/60 (38%), Gaps = 4/60 (6%)
Query: 138 PDLCDPT-SRGSPDLCDP---TSSGSPDLCAPTSSGSPDLCAPTSSGSPDLCAPTSSGSP 193
P C PT S S C P TSS S C P C P SG+ C SS P
Sbjct: 236 PVCCVPTCSDDSGSCCQPACCTSSQSQQGCCVPVCCKPVCCVPVCSGASTSCCQQSSCQP 295
Score = 29.3 bits (64), Expect = 2.2
Identities = 19/42 (45%), Positives = 20/42 (47%), Gaps = 2/42 (4%)
Query: 127 PDLCDPTSSGCPDLCDPTSRGSPDLCDPTSSGSPDLCAPTSS 168
P C PTSS C P S S LC P S P C PTS+
Sbjct: 326 PSCCAPTSSCQASCCRPASCVSL-LCRPACS-RPACCGPTST 365
>gi|163965366 nascent polypeptide-associated complex alpha subunit
isoform a [Homo sapiens]
Length = 2078
Score = 35.0 bits (79), Expect = 0.040
Identities = 19/70 (27%), Positives = 29/70 (41%), Gaps = 4/70 (5%)
Query: 126 PPDLCDPTSSGCPDL--CDPTSRGSPDLCDPTSSGSPDLCAPTSSGSPDLCAPTSSGSPD 183
PP + P+ G P L P+S+G P +P P+ G P + P+ P
Sbjct: 1335 PPAVTPPSPKGTPTLPATTPSSKGGPTTPSSKEGPTPPAATPSHKGGPAMTPPSPKRGPA 1394
Query: 184 LCAPTSSGSP 193
+ P+ G P
Sbjct: 1395 I--PSPKGDP 1402
>gi|115495445 ankyrin repeat domain 30A [Homo sapiens]
Length = 1341
Score = 34.7 bits (78), Expect = 0.052
Identities = 18/60 (30%), Positives = 26/60 (43%)
Query: 133 TSSGCPDLCDPTSRGSPDLCDPTSSGSPDLCAPTSSGSPDLCAPTSSGSPDLCAPTSSGS 192
TS+G PD P + +PD + +PD AP +PD +PD A G+
Sbjct: 220 TSAGTPDEAAPLAERTPDTAESLVEKTPDEAAPLVERTPDTAESLVEKTPDEAASLVEGT 279
Score = 32.0 bits (71), Expect = 0.34
Identities = 19/75 (25%), Positives = 28/75 (37%)
Query: 109 ELSRAHRLPRELGQLLAPPDLCDPTSSGCPDLCDPTSRGSPDLCDPTSSGSPDLCAPTSS 168
+LS+ H+ G PD P + PD + +PD P +PD
Sbjct: 207 KLSKNHQNTNPEGTSAGTPDEAAPLAERTPDTAESLVEKTPDEAAPLVERTPDTAESLVE 266
Query: 169 GSPDLCAPTSSGSPD 183
+PD A G+ D
Sbjct: 267 KTPDEAASLVEGTSD 281
Score = 30.4 bits (67), Expect = 0.98
Identities = 14/39 (35%), Positives = 20/39 (51%)
Query: 155 TSSGSPDLCAPTSSGSPDLCAPTSSGSPDLCAPTSSGSP 193
TS+G+PD AP + +PD +PD AP +P
Sbjct: 220 TSAGTPDEAAPLAERTPDTAESLVEKTPDEAAPLVERTP 258
>gi|239752100 PREDICTED: hypothetical protein [Homo sapiens]
Length = 312
Score = 34.7 bits (78), Expect = 0.052
Identities = 23/68 (33%), Positives = 27/68 (39%), Gaps = 7/68 (10%)
Query: 130 CDPTSSGCPDLCDPTSRGSPDLCDPTSSGS----PDLCAPTSSGSPDLCAPTSSGSPDLC 185
C+P+S C LC S P C + S P C P P C P SG+ LC
Sbjct: 184 CEPSS--CTPLCCQQSSCQPACCTSSPSQQSCCVPVCCKPVCC-KPVCCVPVCSGASSLC 240
Query: 186 APTSSGSP 193
SS P
Sbjct: 241 CQQSSCQP 248
Score = 33.9 bits (76), Expect = 0.088
Identities = 28/84 (33%), Positives = 29/84 (34%), Gaps = 21/84 (25%)
Query: 127 PDLCDPTSSGCPDLCDPTSRGSP-----DLCDPTSSGS---------------PDLCAPT 166
P C P SG LC S P C P+SS S P CAP
Sbjct: 226 PVCCVPVCSGASSLCCQQSSCQPACCTSSCCRPSSSVSLLCHPVCRPTCCMPVPSCCAPA 285
Query: 167 SSGSPDLCAPTSSGSPDLCAPTSS 190
S P C P S S LC P S
Sbjct: 286 FSCQPSCCHPASCVSL-LCRPVCS 308
Score = 32.7 bits (73), Expect = 0.20
Identities = 33/117 (28%), Positives = 40/117 (34%), Gaps = 15/117 (12%)
Query: 84 CLLGLCSPQGILCHSSTQLLNLGAPELSRAHRLPRELGQLLAPPDLCDPT--------SS 135
C C+P L T + + +P A P L C P S
Sbjct: 154 CAASCCAPAPCLTLVCTPVSCVSSPCCQAACE-PSSCTPLCCQQSSCQPACCTSSPSQQS 212
Query: 136 GCPDLCDPTSRGSPDLCDPTSSGSPDLCAPTSSGSPDLCAPTSSGSPDLCAPTSSGS 192
C +C P C P SG+ LC SS P C TSS C P+SS S
Sbjct: 213 CCVPVCCKPVCCKPVCCVPVCSGASSLCCQQSSCQPACC--TSS----CCRPSSSVS 263
>gi|67782356 corneodesmosin precursor [Homo sapiens]
Length = 529
Score = 34.7 bits (78), Expect = 0.052
Identities = 23/62 (37%), Positives = 29/62 (46%), Gaps = 3/62 (4%)
Query: 132 PTSSGCPDLCDPTSRGSPDLCDPTSSGSPDLCA-PTSSGSPDLCAPTSSGSPDLCAPTSS 190
P +G LC S GS C P+SS P + +SSG P P S S C+P +
Sbjct: 371 PVGTGGVQLCGGGSTGSKGPCSPSSSRVPSSSSISSSSGLP--YHPCGSASQSPCSPPGT 428
Query: 191 GS 192
GS
Sbjct: 429 GS 430
Score = 30.0 bits (66), Expect = 1.3
Identities = 19/60 (31%), Positives = 28/60 (46%), Gaps = 1/60 (1%)
Query: 135 SGCPDLCDPTSRGSPDLCDPTSSGSPDLCAPTSSGSPDLCAPTSSGSPDLCA-PTSSGSP 193
S P + ++ S P +G LC S+GS C+P+SS P + +SSG P
Sbjct: 352 SSNPIIPSQSAASSAIAFQPVGTGGVQLCGGGSTGSKGPCSPSSSRVPSSSSISSSSGLP 411
>gi|63053512 keratin associated protein 10-1 [Homo sapiens]
Length = 282
Score = 34.7 bits (78), Expect = 0.052
Identities = 31/108 (28%), Positives = 38/108 (35%), Gaps = 3/108 (2%)
Query: 84 CLLGLCSPQGILCHSSTQLLNLGAPELSRA-HRLPRELGQLLAPPDLCDPTSSGCPDLCD 142
C L C+P L T + + +P A P + G + C SS P C
Sbjct: 32 CALSCCAPAPCLTLVCTPVSRVSSPCCQAACEPSPCQSGCTSSCTPSCCQQSSCQPACC- 90
Query: 143 PTSRGSPDLCDPTSSGSPDLCAPTSSGSPDLCAPTSSGSPDLCAPTSS 190
TS C P C PT S C SS P CA +SS
Sbjct: 91 -TSSPCQQACCVPVCCKPVCCLPTCSKDSSSCCQQSSCQPTCCASSSS 137
Score = 32.3 bits (72), Expect = 0.26
Identities = 26/61 (42%), Positives = 27/61 (44%), Gaps = 8/61 (13%)
Query: 130 CDPTSSGCPDLCDPTSRGSPDLCDPTSSGSPDLCAPTSSGSPDLCAPTSSGSPDLCAPTS 189
C P+SS LC P R P C P SS CAP SS C P S S LC P
Sbjct: 226 CRPSSS-VSLLCRPVCR--PACCMPVSS----CCAPASSCQASCCRPASCVSL-LCRPAC 277
Query: 190 S 190
S
Sbjct: 278 S 278
Score = 31.6 bits (70), Expect = 0.44
Identities = 24/71 (33%), Positives = 26/71 (36%), Gaps = 14/71 (19%)
Query: 130 CDP---TSSGCPDLCDPTSRGSPDLCDPTSSGSPDLCAPTSSGSPDLCAPTSSGSP---- 182
C P TSS C C R P C P C P SG+ C SS P
Sbjct: 169 CHPACCTSSPCQQACCVPVRCKPVCCKPIC------CVPVCSGASTSCCQQSSCQPACCT 222
Query: 183 -DLCAPTSSGS 192
C P+SS S
Sbjct: 223 TSCCRPSSSVS 233
>gi|38490587 keratin associated protein 10-12 [Homo sapiens]
Length = 245
Score = 34.7 bits (78), Expect = 0.052
Identities = 28/87 (32%), Positives = 30/87 (34%), Gaps = 23/87 (26%)
Query: 130 CDPT---SSGCPDLCDPTSRGSPDLCDPTSSGSPDLCAPTSSGSP-----DLCAPTSSGS 181
C P SS C C P C P SG+ LC SS P C P+SS S
Sbjct: 137 CQPACCISSPCQQSCCVPVCCKPICCVPVCSGASSLCCQQSSCQPACCTTSCCRPSSSVS 196
Query: 182 ---------------PDLCAPTSSGSP 193
P C PTSS P
Sbjct: 197 LLCRPVCRPARRVPVPSCCVPTSSCQP 223
Score = 34.3 bits (77), Expect = 0.068
Identities = 28/84 (33%), Positives = 30/84 (35%), Gaps = 21/84 (25%)
Query: 127 PDLCDPTSSGCPDLCDPTSRGSP-----DLCDPTSSGS---------------PDLCAPT 166
P C P SG LC S P C P+SS S P C PT
Sbjct: 159 PICCVPVCSGASSLCCQQSSCQPACCTTSCCRPSSSVSLLCRPVCRPARRVPVPSCCVPT 218
Query: 167 SSGSPDLCAPTSSGSPDLCAPTSS 190
SS P C +S LC PT S
Sbjct: 219 SSCQPS-CGRLASCGSLLCRPTCS 241
Score = 31.6 bits (70), Expect = 0.44
Identities = 25/79 (31%), Positives = 30/79 (37%), Gaps = 10/79 (12%)
Query: 121 GQLLAPPDLCDPTSSG-----CPDLC--DPTSRGSPDL---CDPTSSGSPDLCAPTSSGS 170
G + P CD S CP+ C P +P L C P S S C T S
Sbjct: 11 GSRVCLPGSCDSCSDSWQVDDCPESCCEPPCCAPAPCLSLVCTPVSRVSSPCCRVTCEPS 70
Query: 171 PDLCAPTSSGSPDLCAPTS 189
P TSS +P C +S
Sbjct: 71 PCQSGCTSSCTPSCCQQSS 89
Score = 30.4 bits (67), Expect = 0.98
Identities = 23/64 (35%), Positives = 26/64 (40%), Gaps = 5/64 (7%)
Query: 126 PPDLCDP---TSSGCPDL-CDPTSRGSPDLCDPTSSGSPDLCAPTSSGSPDLCAPTSSGS 181
P C+P + C L C P SR S C T SP TSS +P C SS
Sbjct: 33 PESCCEPPCCAPAPCLSLVCTPVSRVSSPCCRVTCEPSPCQSGCTSSCTPS-CCQQSSCQ 91
Query: 182 PDLC 185
P C
Sbjct: 92 PACC 95
>gi|20070163 voltage-dependent calcium channel alpha 1G subunit
isoform 1 [Homo sapiens]
Length = 2377
Score = 34.3 bits (77), Expect = 0.068
Identities = 29/97 (29%), Positives = 40/97 (41%), Gaps = 9/97 (9%)
Query: 89 CSPQGILCHSSTQLLNLGAPELSRAHRLPRELGQLLAPPDLC-DPTSSGCPDLCDPTSRG 147
C G H T NLG L P++ L+PP + DP P+ P +
Sbjct: 2274 CLDSGSQPHLGTDPSNLGGQPLGGPGSRPKKK---LSPPSITIDP-----PESQGPRTPP 2325
Query: 148 SPDLCDPTSSGSPDLCAPTSSGSPDLCAPTSSGSPDL 184
SP +C + S D P +SG PD A + S D+
Sbjct: 2326 SPGICLRRRAPSSDSKDPLASGPPDSMAASPSPKKDV 2362
>gi|38505292 voltage-dependent calcium channel alpha 1G subunit
isoform 3 [Homo sapiens]
Length = 2343
Score = 34.3 bits (77), Expect = 0.068
Identities = 29/97 (29%), Positives = 40/97 (41%), Gaps = 9/97 (9%)
Query: 89 CSPQGILCHSSTQLLNLGAPELSRAHRLPRELGQLLAPPDLC-DPTSSGCPDLCDPTSRG 147
C G H T NLG L P++ L+PP + DP P+ P +
Sbjct: 2240 CLDSGSQPHLGTDPSNLGGQPLGGPGSRPKKK---LSPPSITIDP-----PESQGPRTPP 2291
Query: 148 SPDLCDPTSSGSPDLCAPTSSGSPDLCAPTSSGSPDL 184
SP +C + S D P +SG PD A + S D+
Sbjct: 2292 SPGICLRRRAPSSDSKDPLASGPPDSMAASPSPKKDV 2328
>gi|38505290 voltage-dependent calcium channel alpha 1G subunit
isoform 13 [Homo sapiens]
Length = 2243
Score = 34.3 bits (77), Expect = 0.068
Identities = 29/97 (29%), Positives = 40/97 (41%), Gaps = 9/97 (9%)
Query: 89 CSPQGILCHSSTQLLNLGAPELSRAHRLPRELGQLLAPPDLC-DPTSSGCPDLCDPTSRG 147
C G H T NLG L P++ L+PP + DP P+ P +
Sbjct: 2140 CLDSGSQPHLGTDPSNLGGQPLGGPGSRPKKK---LSPPSITIDP-----PESQGPRTPP 2191
Query: 148 SPDLCDPTSSGSPDLCAPTSSGSPDLCAPTSSGSPDL 184
SP +C + S D P +SG PD A + S D+
Sbjct: 2192 SPGICLRRRAPSSDSKDPLASGPPDSMAASPSPKKDV 2228
>gi|38505288 voltage-dependent calcium channel alpha 1G subunit
isoform 12 [Homo sapiens]
Length = 2250
Score = 34.3 bits (77), Expect = 0.068
Identities = 29/97 (29%), Positives = 40/97 (41%), Gaps = 9/97 (9%)
Query: 89 CSPQGILCHSSTQLLNLGAPELSRAHRLPRELGQLLAPPDLC-DPTSSGCPDLCDPTSRG 147
C G H T NLG L P++ L+PP + DP P+ P +
Sbjct: 2147 CLDSGSQPHLGTDPSNLGGQPLGGPGSRPKKK---LSPPSITIDP-----PESQGPRTPP 2198
Query: 148 SPDLCDPTSSGSPDLCAPTSSGSPDLCAPTSSGSPDL 184
SP +C + S D P +SG PD A + S D+
Sbjct: 2199 SPGICLRRRAPSSDSKDPLASGPPDSMAASPSPKKDV 2235
>gi|38505286 voltage-dependent calcium channel alpha 1G subunit
isoform 10 [Homo sapiens]
Length = 2266
Score = 34.3 bits (77), Expect = 0.068
Identities = 29/97 (29%), Positives = 40/97 (41%), Gaps = 9/97 (9%)
Query: 89 CSPQGILCHSSTQLLNLGAPELSRAHRLPRELGQLLAPPDLC-DPTSSGCPDLCDPTSRG 147
C G H T NLG L P++ L+PP + DP P+ P +
Sbjct: 2163 CLDSGSQPHLGTDPSNLGGQPLGGPGSRPKKK---LSPPSITIDP-----PESQGPRTPP 2214
Query: 148 SPDLCDPTSSGSPDLCAPTSSGSPDLCAPTSSGSPDL 184
SP +C + S D P +SG PD A + S D+
Sbjct: 2215 SPGICLRRRAPSSDSKDPLASGPPDSMAASPSPKKDV 2251
>gi|38505284 voltage-dependent calcium channel alpha 1G subunit
isoform 4 [Homo sapiens]
Length = 2332
Score = 34.3 bits (77), Expect = 0.068
Identities = 29/97 (29%), Positives = 40/97 (41%), Gaps = 9/97 (9%)
Query: 89 CSPQGILCHSSTQLLNLGAPELSRAHRLPRELGQLLAPPDLC-DPTSSGCPDLCDPTSRG 147
C G H T NLG L P++ L+PP + DP P+ P +
Sbjct: 2229 CLDSGSQPHLGTDPSNLGGQPLGGPGSRPKKK---LSPPSITIDP-----PESQGPRTPP 2280
Query: 148 SPDLCDPTSSGSPDLCAPTSSGSPDLCAPTSSGSPDL 184
SP +C + S D P +SG PD A + S D+
Sbjct: 2281 SPGICLRRRAPSSDSKDPLASGPPDSMAASPSPKKDV 2317
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.319 0.138 0.461
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,286,991
Number of Sequences: 37866
Number of extensions: 698251
Number of successful extensions: 3272
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 69
Number of HSP's successfully gapped in prelim test: 131
Number of HSP's that attempted gapping in prelim test: 2639
Number of HSP's gapped (non-prelim): 554
length of query: 193
length of database: 18,247,518
effective HSP length: 97
effective length of query: 96
effective length of database: 14,574,516
effective search space: 1399153536
effective search space used: 1399153536
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.