Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: CACNA1G Sequence: fasta or formatted (2377aa) NCBI GI: 20070163
Description:

voltage-dependent calcium channel alpha 1G subunit isoform 1

Referenced in:

Calcium and TRP Cation Channels
Lung

Other entries for this name:
alt prot [2171aa] voltage-dependent calcium channel alpha 1G subunit isoform 14
alt prot [2354aa] voltage-dependent calcium channel alpha 1G subunit isoform 2
alt prot [2273aa] voltage-dependent calcium channel alpha 1G subunit isoform 9
alt prot [2298aa] voltage-dependent calcium channel alpha 1G subunit isoform 7
alt prot [2321aa] voltage-dependent calcium channel alpha 1G subunit isoform 5
alt prot [2261aa] voltage-dependent calcium channel alpha 1G subunit isoform 11
alt prot [2306aa] voltage-dependent calcium channel alpha 1G subunit isoform 6
alt prot [2284aa] voltage-dependent calcium channel alpha 1G subunit isoform 8
alt prot [2332aa] voltage-dependent calcium channel alpha 1G subunit isoform 4
alt prot [2266aa] voltage-dependent calcium channel alpha 1G subunit isoform 10
alt prot [2250aa] voltage-dependent calcium channel alpha 1G subunit isoform 12
alt prot [2243aa] voltage-dependent calcium channel alpha 1G subunit isoform 13
alt prot [2343aa] voltage-dependent calcium channel alpha 1G subunit isoform 3
alt prot [1555aa] voltage-dependent calcium channel alpha 1G subunit isoform 15
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.9        165           2
 C cysteine            2.3         55           2
 D aspartate           5.0        120           2
 E glutamate           5.8        137           4
 F phenylalanine       4.5        108           2
 G glycine             7.0        166           4
 H histidine           2.7         65           9
 I isoleucine          4.8        114           2
 K lysine              3.2         76           3
 L leucine            11.7        278           3
 M methionine          2.6         61           1
 N asparagine          2.9         69           1
 P proline             7.2        172           3
 Q glutamine           3.5         83           2
 R arginine            6.4        151           3
 S serine             10.2        243           3
 T threonine           4.0         94           2
 V valine              5.8        139           3
 W tryptophan          1.3         31           1
 Y tyrosine            2.1         50           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   voltage-dependent calcium channel alpha 1G subunit i... 
CACNA1G               0.988   voltage-dependent calcium channel alpha 1G subunit i...
CACNA1G               0.980   voltage-dependent calcium channel alpha 1G subunit i...
CACNA1G               0.978   voltage-dependent calcium channel alpha 1G subunit i...
CACNA1G               0.970   voltage-dependent calcium channel alpha 1G subunit i...
CACNA1G               0.963   voltage-dependent calcium channel alpha 1G subunit i...
CACNA1G               0.958   voltage-dependent calcium channel alpha 1G subunit i...
CACNA1G               0.807   voltage-dependent calcium channel alpha 1G subunit i...
CACNA1G               0.799   voltage-dependent calcium channel alpha 1G subunit i...
CACNA1G               0.798   voltage-dependent calcium channel alpha 1G subunit i...
CACNA1G               0.795   voltage-dependent calcium channel alpha 1G subunit i...
CACNA1G               0.787   voltage-dependent calcium channel alpha 1G subunit i...
CACNA1G               0.787   voltage-dependent calcium channel alpha 1G subunit i...
CACNA1G               0.786   voltage-dependent calcium channel alpha 1G subunit i...
CACNA1G               0.618   voltage-dependent calcium channel alpha 1G subunit i...
CACNA1H               0.465   calcium channel, voltage-dependent, T type, alpha 1H...
CACNA1H               0.464   calcium channel, voltage-dependent, T type, alpha 1H...
CACNA1I               0.307   calcium channel, voltage-dependent, T type, alpha 1I...
CACNA1I               0.307   calcium channel, voltage-dependent, T type, alpha 1I...
SCN5A                 0.089   voltage-gated sodium channel type V alpha isoform a ...
SCN5A                 0.089   voltage-gated sodium channel type V alpha isoform c...
SCN5A                 0.089   voltage-gated sodium channel type V alpha isoform b ...
SCN10A                0.083   sodium channel, voltage-gated, type X, alpha 
SCN5A                 0.082   voltage-gated sodium channel type V alpha isoform d...
SCN5A                 0.081   voltage-gated sodium channel type V alpha isoform e...
SCN11A                0.067   sodium channel, voltage-gated, type XI, alpha [Homo...
SCN9A                 0.064   sodium channel, voltage-gated, type IX, alpha 
CACNA1C               0.064   calcium channel, voltage-dependent, L type, alpha 1...
CACNA1C               0.064   calcium channel, voltage-dependent, L type, alpha 1...
CACNA1C               0.063   calcium channel, voltage-dependent, L type, alpha 1...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press