Guide to the Human Genome
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Name: CACNA1G Sequence: fasta or formatted (2343aa) NCBI GI: 38505292
Description:

voltage-dependent calcium channel alpha 1G subunit isoform 3

Referenced in:

Calcium and TRP Cation Channels
Lung

Other entries for this name:
alt prot [2377aa] voltage-dependent calcium channel alpha 1G subunit isoform 1
alt prot [2171aa] voltage-dependent calcium channel alpha 1G subunit isoform 14
alt prot [2354aa] voltage-dependent calcium channel alpha 1G subunit isoform 2
alt prot [2273aa] voltage-dependent calcium channel alpha 1G subunit isoform 9
alt prot [2298aa] voltage-dependent calcium channel alpha 1G subunit isoform 7
alt prot [2321aa] voltage-dependent calcium channel alpha 1G subunit isoform 5
alt prot [2261aa] voltage-dependent calcium channel alpha 1G subunit isoform 11
alt prot [2306aa] voltage-dependent calcium channel alpha 1G subunit isoform 6
alt prot [2284aa] voltage-dependent calcium channel alpha 1G subunit isoform 8
alt prot [2332aa] voltage-dependent calcium channel alpha 1G subunit isoform 4
alt prot [2266aa] voltage-dependent calcium channel alpha 1G subunit isoform 10
alt prot [2250aa] voltage-dependent calcium channel alpha 1G subunit isoform 12
alt prot [2243aa] voltage-dependent calcium channel alpha 1G subunit isoform 13
alt prot [1555aa] voltage-dependent calcium channel alpha 1G subunit isoform 15
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.9        161           2
 C cysteine            2.3         54           2
 D aspartate           5.0        116           2
 E glutamate           5.8        136           4
 F phenylalanine       4.6        108           2
 G glycine             7.0        163           4
 H histidine           2.8         65           9
 I isoleucine          4.7        111           2
 K lysine              3.3         77           3
 L leucine            11.7        274           3
 M methionine          2.6         61           1
 N asparagine          2.9         68           1
 P proline             7.3        171           3
 Q glutamine           3.5         81           2
 R arginine            6.4        150           3
 S serine             10.0        235           3
 T threonine           4.0         94           2
 V valine              5.8        137           3
 W tryptophan          1.3         31           1
 Y tyrosine            2.1         50           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   voltage-dependent calcium channel alpha 1G subunit i... 
CACNA1G               0.996   voltage-dependent calcium channel alpha 1G subunit i...
CACNA1G               0.993   voltage-dependent calcium channel alpha 1G subunit i...
CACNA1G               0.978   voltage-dependent calcium channel alpha 1G subunit i...
CACNA1G               0.975   voltage-dependent calcium channel alpha 1G subunit i...
CACNA1G               0.971   voltage-dependent calcium channel alpha 1G subunit i...
CACNA1G               0.971   voltage-dependent calcium channel alpha 1G subunit i...
CACNA1G               0.804   voltage-dependent calcium channel alpha 1G subunit i...
CACNA1G               0.804   voltage-dependent calcium channel alpha 1G subunit i...
CACNA1G               0.801   voltage-dependent calcium channel alpha 1G subunit i...
CACNA1G               0.800   voltage-dependent calcium channel alpha 1G subunit i...
CACNA1G               0.800   voltage-dependent calcium channel alpha 1G subunit i...
CACNA1G               0.797   voltage-dependent calcium channel alpha 1G subunit i...
CACNA1G               0.797   voltage-dependent calcium channel alpha 1G subunit i...
CACNA1G               0.614   voltage-dependent calcium channel alpha 1G subunit i...
CACNA1H               0.475   calcium channel, voltage-dependent, T type, alpha 1H...
CACNA1H               0.474   calcium channel, voltage-dependent, T type, alpha 1H...
CACNA1I               0.314   calcium channel, voltage-dependent, T type, alpha 1I...
CACNA1I               0.314   calcium channel, voltage-dependent, T type, alpha 1I...
SCN5A                 0.090   voltage-gated sodium channel type V alpha isoform a ...
SCN5A                 0.090   voltage-gated sodium channel type V alpha isoform c...
SCN5A                 0.090   voltage-gated sodium channel type V alpha isoform b ...
SCN5A                 0.087   voltage-gated sodium channel type V alpha isoform f...
SCN10A                0.085   sodium channel, voltage-gated, type X, alpha 
SCN11A                0.069   sodium channel, voltage-gated, type XI, alpha [Homo...
SCN9A                 0.066   sodium channel, voltage-gated, type IX, alpha 
CACNA1C               0.066   calcium channel, voltage-dependent, L type, alpha 1...
CACNA1C               0.066   calcium channel, voltage-dependent, L type, alpha 1...
CACNA1C               0.066   calcium channel, voltage-dependent, L type, alpha 1...
CACNA1C               0.066   calcium channel, voltage-dependent, L type, alpha 1...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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