Guide to the Human Genome
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Name: ANKRD30A Sequence: fasta or formatted (1341aa) NCBI GI: 115495445
Description:

ankyrin repeat domain 30A

Referenced in:

Ankyrin Family
Mammary Tissues

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.3         98           2
 C cysteine            2.2         30           1
 D aspartate           4.6         62           1
 E glutamate          12.2        164           3
 F phenylalanine       1.9         26           1
 G glycine             2.5         33           1
 H histidine           2.8         38           2
 I isoleucine          4.7         63           1
 K lysine             11.6        156           3
 L leucine             8.7        116           3
 M methionine          2.5         34           1
 N asparagine          4.8         65           2
 P proline             4.5         61           2
 Q glutamine           6.0         81           3
 R arginine            3.4         45           2
 S serine              7.5        100           2
 T threonine           5.4         72           1
 V valine              4.8         65           2
 W tryptophan          0.8         11           1
 Y tyrosine            1.6         21           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   ankyrin repeat domain 30A 
ANKRD30B              0.500   ankyrin repeat domain 30B 
ANKRD26               0.179   ankyrin repeat domain 26 
LOC400986             0.136   PREDICTED: protein immuno-reactive with anti-PTH po...
ANKRD36               0.134   PREDICTED: ankyrin repeat domain 36 
ANKRD36B              0.131   ankyrin repeat domain 36B 
LOC400986             0.123   PREDICTED: protein immuno-reactive with anti-PTH po...
CCDC144A              0.120   coiled-coil domain containing 144A 
ANKRD62               0.115   PREDICTED: ankyrin repeat domain 62 
ANKRD62               0.115   PREDICTED: ankyrin repeat domain 62 isoform 4 [Homo...
ANKRD62               0.115   PREDICTED: ankyrin repeat domain 62 isoform 1 [Homo...
LOC730658             0.109   PREDICTED: similar to UPF0634 protein KIAA1641 [Hom...
ANKRD20A5             0.102   PREDICTED: ankyrin repeat domain 20 family, member ...
ANKRD20A5             0.102   PREDICTED: ankyrin repeat domain 20 family, member ...
LOC100132257          0.101   PREDICTED: similar to Putative ankyrin repeat domai...
LOC730465             0.099   PREDICTED: similar to hCG1793014 
ANKRD20A3             0.098   ankyrin repeat domain 20 family, member A3 
ANKRD20A2             0.098   ankyrin repeat domain 20 family, member A2 
ANKRD20A1             0.098   ankyrin repeat domain 20 family, member A1 
ANKRD20A4             0.097   ankyrin repeat domain 20 family, member A4 
LOC729722             0.095   PREDICTED: ankyrin repeat domain-containing protein...
LOC729722             0.095   PREDICTED: ankyrin repeat domain-containing protein...
LOC730465             0.095   PREDICTED: similar to Putative ankyrin repeat domai...
LOC729549             0.087   PREDICTED: similar to hCG1793014 
LOC729549             0.087   PREDICTED: similar to hCG1793014 
LOC729549             0.085   PREDICTED: similar to UNCoordinated family member (...
POTEF                 0.073   prostate, ovary, testis expressed protein on chromo...
LOC100132257          0.073   PREDICTED: similar to Putative ankyrin repeat domai...
ANKRD18B              0.072   PREDICTED: ankyrin repeat domain 18B 
ANKRD18B              0.072   PREDICTED: ankyrin repeat domain 18B 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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