Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: CACNA1G Sequence: fasta or formatted (2243aa) NCBI GI: 38505290
Description:

voltage-dependent calcium channel alpha 1G subunit isoform 13

Referenced in:

Calcium and TRP Cation Channels
Lung

Other entries for this name:
alt prot [2377aa] voltage-dependent calcium channel alpha 1G subunit isoform 1
alt prot [2171aa] voltage-dependent calcium channel alpha 1G subunit isoform 14
alt prot [2354aa] voltage-dependent calcium channel alpha 1G subunit isoform 2
alt prot [2273aa] voltage-dependent calcium channel alpha 1G subunit isoform 9
alt prot [2298aa] voltage-dependent calcium channel alpha 1G subunit isoform 7
alt prot [2321aa] voltage-dependent calcium channel alpha 1G subunit isoform 5
alt prot [2261aa] voltage-dependent calcium channel alpha 1G subunit isoform 11
alt prot [2306aa] voltage-dependent calcium channel alpha 1G subunit isoform 6
alt prot [2284aa] voltage-dependent calcium channel alpha 1G subunit isoform 8
alt prot [2332aa] voltage-dependent calcium channel alpha 1G subunit isoform 4
alt prot [2266aa] voltage-dependent calcium channel alpha 1G subunit isoform 10
alt prot [2250aa] voltage-dependent calcium channel alpha 1G subunit isoform 12
alt prot [2343aa] voltage-dependent calcium channel alpha 1G subunit isoform 3
alt prot [1555aa] voltage-dependent calcium channel alpha 1G subunit isoform 15
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.8        153           2
 C cysteine            2.4         53           2
 D aspartate           4.8        108           2
 E glutamate           5.6        126           4
 F phenylalanine       4.7        106           2
 G glycine             7.0        157           4
 H histidine           2.9         64           9
 I isoleucine          4.8        107           2
 K lysine              3.3         75           3
 L leucine            11.4        256           3
 M methionine          2.5         57           1
 N asparagine          3.0         67           1
 P proline             7.3        163           3
 Q glutamine           3.4         76           2
 R arginine            6.6        149           3
 S serine              9.8        220           3
 T threonine           4.0         90           2
 V valine              6.1        136           3
 W tryptophan          1.3         30           1
 Y tyrosine            2.2         50           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   voltage-dependent calcium channel alpha 1G subunit i... 
CACNA1G               0.998   voltage-dependent calcium channel alpha 1G subunit i...
CACNA1G               0.997   voltage-dependent calcium channel alpha 1G subunit i...
CACNA1G               0.997   voltage-dependent calcium channel alpha 1G subunit i...
CACNA1G               0.995   voltage-dependent calcium channel alpha 1G subunit i...
CACNA1G               0.994   voltage-dependent calcium channel alpha 1G subunit i...
CACNA1G               0.993   voltage-dependent calcium channel alpha 1G subunit i...
CACNA1G               0.992   voltage-dependent calcium channel alpha 1G subunit i...
CACNA1G               0.990   voltage-dependent calcium channel alpha 1G subunit i...
CACNA1G               0.989   voltage-dependent calcium channel alpha 1G subunit i...
CACNA1G               0.898   voltage-dependent calcium channel alpha 1G subunit i...
CACNA1G               0.834   voltage-dependent calcium channel alpha 1G subunit i...
CACNA1G               0.833   voltage-dependent calcium channel alpha 1G subunit i...
CACNA1G               0.830   voltage-dependent calcium channel alpha 1G subunit i...
CACNA1G               0.640   voltage-dependent calcium channel alpha 1G subunit i...
CACNA1H               0.514   calcium channel, voltage-dependent, T type, alpha 1H...
CACNA1H               0.512   calcium channel, voltage-dependent, T type, alpha 1H...
CACNA1I               0.319   calcium channel, voltage-dependent, T type, alpha 1I...
CACNA1I               0.319   calcium channel, voltage-dependent, T type, alpha 1I...
SCN5A                 0.094   voltage-gated sodium channel type V alpha isoform a ...
SCN5A                 0.094   voltage-gated sodium channel type V alpha isoform c...
SCN5A                 0.093   voltage-gated sodium channel type V alpha isoform b ...
SCN5A                 0.091   voltage-gated sodium channel type V alpha isoform f...
SCN10A                0.088   sodium channel, voltage-gated, type X, alpha 
SCN11A                0.072   sodium channel, voltage-gated, type XI, alpha [Homo...
CACNA1C               0.069   calcium channel, voltage-dependent, L type, alpha 1...
CACNA1C               0.069   calcium channel, voltage-dependent, L type, alpha 1...
CACNA1C               0.069   calcium channel, voltage-dependent, L type, alpha 1...
CACNA1C               0.069   calcium channel, voltage-dependent, L type, alpha 1...
CACNA1C               0.069   calcium channel, voltage-dependent, L type, alpha 1...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press