Guide to the Human Genome
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Name: MDM2 Sequence: fasta or formatted (452aa) NCBI GI: 223890197
Description:

mouse double minute 2 homolog isoform MDM2f

Referenced in:

p53 Pathway
Ubiquitin and Related Protein Modifications

Other entries for this name:
alt prot [444aa] mouse double minute 2 homolog isoform MDM2g
alt prot [442aa] mouse double minute 2 homolog isoform MDM2h
alt prot [295aa] mouse double minute 2 homolog isoform MDM2i
alt prot [497aa] mouse double minute 2 homolog isoform MDM2
alt prot [249aa] mouse double minute 2 homolog isoform MDM2a
alt prot [179aa] mouse double minute 2 homolog isoform MDM2e
alt prot [111aa] mouse double minute 2 homolog isoform MDM2b
alt prot [172aa] mouse double minute 2 homolog isoform MDM2d
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             3.3         15           1
 C cysteine            4.0         18           2
 D aspartate           7.3         33           2
 E glutamate          11.9         54           2
 F phenylalanine       1.8          8           1
 G glycine             4.0         18           2
 H histidine           1.5          7           1
 I isoleucine          4.0         18           2
 K lysine              6.2         28           2
 L leucine             6.6         30           3
 M methionine          1.8          8           1
 N asparagine          3.8         17           1
 P proline             4.9         22           2
 Q glutamine           5.5         25           2
 R arginine            4.6         21           3
 S serine             14.2         64           4
 T threonine           5.3         24           2
 V valine              6.2         28           3
 W tryptophan          0.9          4           1
 Y tyrosine            2.2         10           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   mouse double minute 2 homolog isoform MDM2f 
MDM2                  0.975   mouse double minute 2 homolog isoform MDM2 
MDM2                  0.825   mouse double minute 2 homolog isoform MDM2g 
MDM2                  0.621   mouse double minute 2 homolog isoform MDM2h 
MDM2                  0.530   mouse double minute 2 homolog isoform MDM2i 
MDM2                  0.238   mouse double minute 2 homolog isoform MDM2a 
MDM2                  0.189   mouse double minute 2 homolog isoform MDM2d 
MDM2                  0.169   mouse double minute 2 homolog isoform MDM2e 
MDM4                  0.157   mouse double minute 4 homolog 
MDM2                  0.103   mouse double minute 2 homolog isoform MDM2b 
DSPP                  0.039   dentin sialophosphoprotein preproprotein 
SPARCL1               0.024   SPARC-like 1 
SPARCL1               0.024   SPARC-like 1 
RNF219                0.020   ring finger protein 219 
NEURL                 0.019   neuralized-like 
EIF5B                 0.019   eukaryotic translation initiation factor 5B 
YTHDC1                0.019   splicing factor YT521-B isoform 2 
YTHDC1                0.019   splicing factor YT521-B isoform 1 
BIRC3                 0.018   baculoviral IAP repeat-containing protein 3 
BIRC3                 0.018   baculoviral IAP repeat-containing protein 3 
CYLC1                 0.017   cylicin, basic protein of sperm head cytoskeleton 1...
ACRC                  0.017   ACRC protein 
ANKRD36B              0.017   ankyrin repeat domain 36B 
NEURL1B               0.016   neuralized homolog 1B 
DMP1                  0.016   dentin matrix acidic phosphoprotein 1 isoform 1 precu...
DMP1                  0.016   dentin matrix acidic phosphoprotein 1 isoform 2 pre...
LOC100133923          0.016   PREDICTED: similar to UPF0634 protein C 
RNF157                0.016   ring finger protein 157 
MYLIP                 0.016   myosin regulatory light chain interacting protein [H...
TSR1                  0.016   TSR1, 20S rRNA accumulation 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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