Guide to the Human Genome
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Name: DSPP Sequence: fasta or formatted (1301aa) NCBI GI: 89001107
Description:

dentin sialophosphoprotein preproprotein

Referenced in:

Bone and Related Tissues
Protein Composition and Structure

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             1.8         23           1
 C cysteine            0.2          2           1
 D aspartate          19.9        259           3
 E glutamate           4.9         64           2
 F phenylalanine       0.2          3           1
 G glycine             6.1         80           2
 H histidine           1.2         15           1
 I isoleucine          1.8         24           2
 K lysine              3.3         43           1
 L leucine             0.8         10           2
 M methionine          0.3          4           1
 N asparagine          9.1        119           3
 P proline             1.1         14           1
 Q glutamine           1.6         21           1
 R arginine            1.1         14           1
 S serine             41.7        542           5
 T threonine           2.2         29           1
 V valine              1.8         23           2
 W tryptophan          0.3          4           1
 Y tyrosine            0.6          8           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   dentin sialophosphoprotein preproprotein 
FLG                   0.096   filaggrin 
HRNR                  0.096   hornerin 
MUC21                 0.083   mucin 21 
FLG2                  0.070   filaggrin family member 2 
LOC729792             0.068   PREDICTED: hypothetical protein 
LOC100294136          0.068   PREDICTED: hypothetical protein 
LOC100294091          0.068   PREDICTED: hypothetical protein 
LOC729792             0.066   PREDICTED: hypothetical protein 
LOC730401             0.066   PREDICTED: hypothetical protein 
LOC100294501          0.066   PREDICTED: hypothetical protein 
LOC729792             0.065   PREDICTED: hypothetical protein 
LOC100294238          0.065   PREDICTED: hypothetical protein 
LOC100294204          0.065   PREDICTED: hypothetical protein 
LOC100294249          0.065   PREDICTED: hypothetical protein XP_002344067 
DMP1                  0.062   dentin matrix acidic phosphoprotein 1 isoform 1 precu...
DMP1                  0.059   dentin matrix acidic phosphoprotein 1 isoform 2 pre...
ACRC                  0.058   ACRC protein 
MUC12                 0.054   PREDICTED: mucin 12 
MED1                  0.051   mediator complex subunit 1 
MUC12                 0.051   PREDICTED: mucin 12, cell surface associated 
AFF4                  0.051   ALL1 fused gene from 5q31 
IWS1                  0.050   IWS1 homolog 
MUC12                 0.050   PREDICTED: mucin 12 
MUC17                 0.046   mucin 17 
LOC100133714          0.045   PREDICTED: similar to Mucin-12, partial 
LOC100170229          0.045   hypothetical protein LOC100170229 
LOC729815             0.045   PREDICTED: hypothetical protein 
ATRX                  0.045   transcriptional regulator ATRX isoform 2 
ATRX                  0.045   transcriptional regulator ATRX isoform 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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