Guide to the Human Genome
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Name: ACRC Sequence: fasta or formatted (691aa) NCBI GI: 16445033
Description:

ACRC protein

Referenced in:

Protein Composition and Structure
Nucleus and Nucleolus

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.6         39           4
 C cysteine            2.7         19           2
 D aspartate          17.7        122           3
 E glutamate           7.7         53           3
 F phenylalanine       0.6          4           1
 G glycine             3.5         24           1
 H histidine           1.9         13           1
 I isoleucine          3.5         24           1
 K lysine              8.7         60           3
 L leucine             4.2         29           2
 M methionine          0.7          5           1
 N asparagine          4.2         29           2
 P proline             7.1         49           2
 Q glutamine           2.3         16           1
 R arginine            4.9         34           2
 S serine             13.3         92           3
 T threonine           3.5         24           1
 V valine              5.8         40           3
 W tryptophan          0.7          5           1
 Y tyrosine            1.4         10           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   ACRC protein 
DSPP                  0.103   dentin sialophosphoprotein preproprotein 
LEO1                  0.054   Leo1, Paf1/RNA polymerase II complex component, homo...
TSPYL2                0.044   TSPY-like 2 
MDN1                  0.043   MDN1, midasin homolog 
SETD1A                0.039   SET domain containing 1A 
IWS1                  0.039   IWS1 homolog 
HTATSF1               0.038   HIV-1 Tat specific factor 1 
HTATSF1               0.038   HIV-1 Tat specific factor 1 
DMP1                  0.035   dentin matrix acidic phosphoprotein 1 isoform 1 precu...
DMP1                  0.035   dentin matrix acidic phosphoprotein 1 isoform 2 pre...
NCL                   0.035   nucleolin 
LOC647546             0.035   PREDICTED: hypothetical protein 
BOD1L                 0.034   biorientation of chromosomes in cell division 1-like...
NOLC1                 0.034   nucleolar and coiled-body phosphoprotein 1 
EIF3A                 0.033   eukaryotic translation initiation factor 3, subunit 1...
MYST3                 0.033   MYST histone acetyltransferase (monocytic leukemia)...
MYST3                 0.033   MYST histone acetyltransferase (monocytic leukemia)...
MYST3                 0.033   MYST histone acetyltransferase (monocytic leukemia)...
COMP                  0.032   cartilage oligomeric matrix protein precursor 
CLIC6                 0.032   chloride intracellular channel 6 
UBTF                  0.032   upstream binding transcription factor, RNA polymera...
UBTF                  0.032   upstream binding transcription factor, RNA polymera...
UBTF                  0.032   upstream binding transcription factor, RNA polymerase...
HDGF2                 0.032   hepatoma-derived growth factor-related protein 2 iso...
HDGF2                 0.032   hepatoma-derived growth factor-related protein 2 iso...
NEFH                  0.031   neurofilament, heavy polypeptide 200kDa 
TNRC18                0.031   trinucleotide repeat containing 18 
TGOLN2                0.031   trans-golgi network protein 2 
SETD1B                0.030   SET domain containing 1B 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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