Guide to the Human Genome
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Name: LOC100133923 Sequence: fasta or formatted (710aa) NCBI GI: 239753245
Description:

PREDICTED: similar to UPF0634 protein C

Referenced in:

Ankyrin Family

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.0         50           1
 C cysteine            0.3          2           1
 D aspartate           6.9         49           1
 E glutamate           6.9         49           2
 F phenylalanine       1.1          8           1
 G glycine             6.8         48           3
 H histidine           0.3          2           1
 I isoleucine          5.5         39           1
 K lysine             14.6        104           3
 L leucine             6.2         44           3
 M methionine          0.7          5           1
 N asparagine          3.4         24           1
 P proline             3.8         27           2
 Q glutamine           4.8         34           2
 R arginine            4.5         32           2
 S serine             13.0         92           2
 T threonine           6.8         48           2
 V valine              6.2         44           1
 W tryptophan          0.1          1           1
 Y tyrosine            1.1          8           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   PREDICTED: similar to UPF0634 protein C 
ANKRD36               0.645   PREDICTED: ankyrin repeat domain 36 
ANKRD36               0.604   PREDICTED: ankyrin repeat domain 36 
LOC400986             0.482   PREDICTED: protein immuno-reactive with anti-PTH po...
ANKRD36B              0.442   ankyrin repeat domain 36B 
LOC100289777          0.353   PREDICTED: hypothetical protein XP_002348316 
LOC400986             0.203   PREDICTED: protein immuno-reactive with anti-PTH po...
ANKRD36               0.130   PREDICTED: ankyrin repeat domain 36 
LOC100291104          0.075   PREDICTED: hypothetical protein XP_002346815 
ANKRD30A              0.063   ankyrin repeat domain 30A 
ANKRD30B              0.058   ankyrin repeat domain 30B 
POTEA                 0.055   POTE ankyrin domain family, member A isoform 2 [Homo...
POTEE                 0.053   protein expressed in prostate, ovary, testis, and p...
LOC653781             0.051   PREDICTED: similar to protein expressed in prostate...
LOC653269             0.051   PREDICTED: similar to protein expressed in prostate,...
POTEF                 0.050   prostate, ovary, testis expressed protein on chromo...
ANKRD20A1             0.050   ankyrin repeat domain 20 family, member A1 
ANKRD20A4             0.050   ankyrin repeat domain 20 family, member A4 
ANKRD20A3             0.048   ankyrin repeat domain 20 family, member A3 
ANKRD20A2             0.048   ankyrin repeat domain 20 family, member A2 
POTEH                 0.047   ANKRD26-like family C, member 3 
LOC653269             0.047   PREDICTED: similar to protein expressed in prostate...
POTEG                 0.047   POTE ankyrin domain family, member G 
ANKRD62               0.047   PREDICTED: ankyrin repeat domain 62 
ANKRD62               0.047   PREDICTED: ankyrin repeat domain 62 isoform 4 [Homo...
P704P                 0.047   prostate-specific P704P 
ANKRD62               0.046   PREDICTED: ankyrin repeat domain 62 isoform 1 [Homo...
POTEB                 0.046   protein expressed in prostate, ovary, testis, and pl...
POTEC                 0.046   ANKRD26-like family B, member 2 
LOC100287399          0.046   PREDICTED: hypothetical protein XP_002343353 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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