Guide to the Human Genome
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Name: NEURL1B Sequence: fasta or formatted (555aa) NCBI GI: 217416388
Description:

neuralized homolog 1B

Referenced in:

Notch Pathway
Ring Finger Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            10.8         60           5
 C cysteine            3.4         19           2
 D aspartate           5.8         32           2
 E glutamate           3.6         20           1
 F phenylalanine       3.6         20           2
 G glycine             8.8         49           2
 H histidine           2.0         11           1
 I isoleucine          2.3         13           1
 K lysine              2.0         11           1
 L leucine            10.3         57           2
 M methionine          0.7          4           1
 N asparagine          2.7         15           2
 P proline            10.5         58           3
 Q glutamine           2.3         13           1
 R arginine            9.0         50           2
 S serine              7.6         42           3
 T threonine           4.9         27           3
 V valine              7.0         39           2
 W tryptophan          1.1          6           1
 Y tyrosine            1.6          9           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   neuralized homolog 1B 
NEURL                 0.359   neuralized-like 
NEURL4                0.038   neuralized homolog 4 isoform 1 
NEURL4                0.038   neuralized homolog 4 isoform 2 
NEURL2                0.034   neuralized-like protein 2 
LRSAM1                0.030   leucine rich repeat and sterile alpha motif containi...
LRSAM1                0.030   leucine rich repeat and sterile alpha motif containi...
LRSAM1                0.030   leucine rich repeat and sterile alpha motif containi...
RFFL                  0.027   rififylin 
RFFL                  0.027   rififylin 
MEX3D                 0.027   ring finger and KH domain containing 1 
RNF157                0.026   ring finger protein 157 
MGRN1                 0.025   mahogunin, ring finger 1 isoform 4 
MGRN1                 0.025   mahogunin, ring finger 1 isoform 3 
MGRN1                 0.025   mahogunin, ring finger 1 isoform 2 
MGRN1                 0.025   mahogunin, ring finger 1 isoform 1 
MEX3A                 0.025   MEX3A protein 
MEX3B                 0.022   mex-3 homolog B 
MEX3C                 0.021   ring finger and KH domain containing 2 
RNF34                 0.021   ring finger protein 34 isoform 1 
RNF34                 0.021   ring finger protein 34 isoform 2 
BIRC3                 0.021   baculoviral IAP repeat-containing protein 3 
BIRC3                 0.021   baculoviral IAP repeat-containing protein 3 
BIRC2                 0.020   baculoviral IAP repeat-containing protein 2 
MYLIP                 0.018   myosin regulatory light chain interacting protein [H...
MUL1                  0.017   mitochondrial ubiquitin ligase activator of NFKB 1 ...
MIB2                  0.017   mindbomb homolog 2 
RNF26                 0.017   ring finger protein 26 
CGRRF1                0.016   cell growth regulator with ring finger domain 1 [Homo...
RSPRY1                0.016   ring finger and SPRY domain containing 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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