Guide to the Human Genome
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Name: RNF157 Sequence: fasta or formatted (679aa) NCBI GI: 58743365
Description:

ring finger protein 157

Referenced in:

Ring Finger Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.2         42           2
 C cysteine            3.1         21           1
 D aspartate           5.7         39           2
 E glutamate           9.0         61           3
 F phenylalanine       2.8         19           1
 G glycine             6.6         45           2
 H histidine           2.5         17           1
 I isoleucine          3.2         22           2
 K lysine              3.5         24           2
 L leucine             8.8         60           2
 M methionine          1.2          8           1
 N asparagine          4.0         27           3
 P proline             7.4         50           3
 Q glutamine           4.3         29           2
 R arginine            3.8         26           3
 S serine             12.8         87           4
 T threonine           5.0         34           1
 V valine              6.8         46           2
 W tryptophan          0.4          3           1
 Y tyrosine            2.8         19           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   ring finger protein 157 
MGRN1                 0.404   mahogunin, ring finger 1 isoform 4 
MGRN1                 0.404   mahogunin, ring finger 1 isoform 2 
MGRN1                 0.396   mahogunin, ring finger 1 isoform 3 
MGRN1                 0.396   mahogunin, ring finger 1 isoform 1 
NEURL1B               0.021   neuralized homolog 1B 
RNF26                 0.020   ring finger protein 26 
RERE                  0.019   atrophin-1 like protein isoform a 
RERE                  0.019   atrophin-1 like protein isoform a 
MUC17                 0.019   mucin 17 
CGRRF1                0.018   cell growth regulator with ring finger domain 1 [Homo...
DSPP                  0.017   dentin sialophosphoprotein preproprotein 
NEURL                 0.016   neuralized-like 
LRSAM1                0.015   leucine rich repeat and sterile alpha motif containi...
LRSAM1                0.015   leucine rich repeat and sterile alpha motif containi...
LRSAM1                0.015   leucine rich repeat and sterile alpha motif containi...
TNRC18                0.015   trinucleotide repeat containing 18 
MUL1                  0.015   mitochondrial ubiquitin ligase activator of NFKB 1 ...
RNF165                0.013   ring finger protein 165 
RNF141                0.013   ring finger protein 141 
MDM2                  0.013   mouse double minute 2 homolog isoform MDM2e 
BIRC3                 0.013   baculoviral IAP repeat-containing protein 3 
BIRC3                 0.013   baculoviral IAP repeat-containing protein 3 
CDKN2AIP              0.012   CDKN2A interacting protein 
BIRC2                 0.012   baculoviral IAP repeat-containing protein 2 
TCOF1                 0.012   Treacher Collins-Franceschetti syndrome 1 isoform f...
TCOF1                 0.012   Treacher Collins-Franceschetti syndrome 1 isoform e...
TCOF1                 0.012   Treacher Collins-Franceschetti syndrome 1 isoform d...
TCOF1                 0.012   Treacher Collins-Franceschetti syndrome 1 isoform b ...
TCOF1                 0.012   Treacher Collins-Franceschetti syndrome 1 isoform a ...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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