Guide to the Human Genome
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Name: DMP1 Sequence: fasta or formatted (513aa) NCBI GI: 4758172
Description:

dentin matrix acidic phosphoprotein 1 isoform 1 precursor

Referenced in:

Bone and Related Tissues

Other entries for this name:
alt prot [497aa] dentin matrix acidic phosphoprotein 1 isoform 2 precursor
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             2.7         14           1
 C cysteine            0.4          2           1
 D aspartate          12.7         65           3
 E glutamate          15.0         77           2
 F phenylalanine       1.0          5           1
 G glycine             7.8         40           3
 H histidine           1.9         10           1
 I isoleucine          1.9         10           1
 K lysine              3.9         20           1
 L leucine             4.5         23           2
 M methionine          1.2          6           1
 N asparagine          4.7         24           2
 P proline             3.5         18           2
 Q glutamine           6.0         31           1
 R arginine            4.1         21           2
 S serine             21.4        110           3
 T threonine           3.5         18           2
 V valine              1.9         10           2
 W tryptophan          0.6          3           1
 Y tyrosine            1.2          6           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   dentin matrix acidic phosphoprotein 1 isoform 1 precu... 
DMP1                  0.962   dentin matrix acidic phosphoprotein 1 isoform 2 pre...
DSPP                  0.151   dentin sialophosphoprotein preproprotein 
RPGR                  0.078   retinitis pigmentosa GTPase regulator isoform C [Hom...
IWS1                  0.074   IWS1 homolog 
FLG                   0.067   filaggrin 
MDN1                  0.066   MDN1, midasin homolog 
RP1L1                 0.063   retinitis pigmentosa 1-like 1 
LEO1                  0.060   Leo1, Paf1/RNA polymerase II complex component, homo...
SETD1B                0.055   SET domain containing 1B 
EIF5B                 0.054   eukaryotic translation initiation factor 5B 
HTATSF1               0.051   HIV-1 Tat specific factor 1 
HTATSF1               0.051   HIV-1 Tat specific factor 1 
CDC2L2                0.050   cell division cycle 2-like 2 isoform 1 
HRC                   0.050   histidine rich calcium binding protein precursor [Hom...
ACRC                  0.049   ACRC protein 
CDC2L1                0.049   cell division cycle 2-like 1 (PITSLRE proteins) isof...
AFF4                  0.049   ALL1 fused gene from 5q31 
CDC2L2                0.049   cell division cycle 2-like 2 isoform 4 
PPIG                  0.048   peptidylprolyl isomerase G 
CDC2L1                0.048   cell division cycle 2-like 1 (PITSLRE proteins) isof...
ATRX                  0.046   transcriptional regulator ATRX isoform 2 
ATRX                  0.046   transcriptional regulator ATRX isoform 1 
CDC2L1                0.046   cell division cycle 2-like 1 (PITSLRE proteins) isof...
SFRS4                 0.046   splicing factor, arginine/serine-rich 4 
GPATCH8               0.045   G patch domain containing 8 
PCLO                  0.044   piccolo isoform 2 
PCLO                  0.044   piccolo isoform 1 
SMTNL1                0.044   smoothelin-like 1 
SETD1A                0.044   SET domain containing 1A 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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