YTHDC1 37489

Name: YTHDC1	Sequence: fasta or formatted (709aa)		NCBI GI: 94536805
Description: splicing factor YT521-B isoform 2		Referenced in: RNA-binding Proteins Capping and Splicing
Other entries for this name: alt prot [727aa] splicing factor YT521-B isoform 1
Composition: Amino acid Percentage Count Longest homopolymer A alanine 3.5 25 2 C cysteine 0.7 5 1 D aspartate 8.3 59 2 E glutamate 13.5 96 20 F phenylalanine 2.3 16 2 G glycine 6.1 43 2 H histidine 3.2 23 2 I isoleucine 2.5 18 1 K lysine 6.2 44 3 L leucine 4.4 31 2 M methionine 1.4 10 1 N asparagine 3.5 25 2 P proline 6.5 46 4 Q glutamine 3.4 24 1 R arginine 12.6 89 3 S serine 10.2 72 3 T threonine 2.5 18 1 V valine 5.2 37 2 W tryptophan 0.7 5 1 Y tyrosine 3.2 23 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 splicing factor YT521-B isoform 2 YTHDC1 0.992 splicing factor YT521-B isoform 1 YTHDC2 0.071 YTH domain containing 2 EIF5B 0.046 eukaryotic translation initiation factor 5B CDC2L2 0.045 cell division cycle 2-like 2 isoform 4 CDC2L2 0.045 cell division cycle 2-like 2 isoform 1 CDC2L1 0.045 cell division cycle 2-like 1 (PITSLRE proteins) isof... CDC2L1 0.045 cell division cycle 2-like 1 (PITSLRE proteins) isof... CDC2L1 0.045 cell division cycle 2-like 1 (PITSLRE proteins) isof... CDC2L1 0.045 cell division cycle 2-like 1 (PITSLRE proteins) isof... CDC2L1 0.042 cell division cycle 2-like 1 (PITSLRE proteins) isof... MYT1L 0.041 myelin transcription factor 1-like SFRS18 0.041 splicing factor, arginine/serine-rich 130 SFRS18 0.041 splicing factor, arginine/serine-rich 130 RPGR 0.041 retinitis pigmentosa GTPase regulator isoform C [Hom... ZEB1 0.038 zinc finger E-box binding homeobox 1 isoform a [Hom... ZEB1 0.038 zinc finger E-box binding homeobox 1 isoform b [Hom... MYT1 0.037 myelin transcription factor 1 RBM25 0.037 RNA binding motif protein 25 PELP1 0.037 proline, glutamic acid and leucine rich protein 1 [... HRC 0.037 histidine rich calcium binding protein precursor [Hom... SRCAP 0.034 Snf2-related CBP activator protein TCHH 0.034 trichohyalin TTBK1 0.034 tau tubulin kinase 1 CYLC1 0.033 cylicin, basic protein of sperm head cytoskeleton 1... ESF1 0.033 ABT1-associated protein SLC24A1 0.033 solute carrier family 24 (sodium/potassium/calcium ex... LOC100286959 0.033 PREDICTED: hypothetical protein XP_002343921 RDBP 0.033 RD RNA-binding protein SETD1A 0.032 SET domain containing 1A Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.