SPARCL1 10540

Name: SPARCL1	Sequence: fasta or formatted (664aa)		NCBI GI: 190341024
Description: SPARC-like 1		Referenced in: Bone and Related Tissues
Other entries for this name: alt mRNA [664aa] SPARC-like 1
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.4 36 3 C cysteine 2.3 15 1 D aspartate 7.8 52 3 E glutamate 13.0 86 5 F phenylalanine 2.7 18 2 G glycine 5.3 35 2 H histidine 4.7 31 2 I isoleucine 3.3 22 1 K lysine 6.9 46 2 L leucine 7.2 48 3 M methionine 1.8 12 1 N asparagine 5.7 38 1 P proline 4.5 30 2 Q glutamine 6.5 43 2 R arginine 3.5 23 1 S serine 7.8 52 3 T threonine 5.9 39 2 V valine 3.3 22 1 W tryptophan 0.6 4 1 Y tyrosine 1.8 12 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 SPARC-like 1 SPARCL1 1.000 SPARC-like 1 SPARC 0.222 secreted protein, acidic, cysteine-rich RPGR 0.038 retinitis pigmentosa GTPase regulator isoform C [Hom... SPOCK3 0.032 testican 3 isoform 1 SPOCK3 0.032 testican 3 isoform 2 RP1L1 0.031 retinitis pigmentosa 1-like 1 LEO1 0.030 Leo1, Paf1/RNA polymerase II complex component, homo... DSPP 0.030 dentin sialophosphoprotein preproprotein CYLC1 0.029 cylicin, basic protein of sperm head cytoskeleton 1... IWS1 0.028 IWS1 homolog LOC645202 0.028 PREDICTED: hypothetical protein LOC645202 MDN1 0.028 MDN1, midasin homolog HRC 0.026 histidine rich calcium binding protein precursor [Hom... CALD1 0.026 caldesmon 1 isoform 1 NSBP1 0.025 nucleosomal binding protein 1 FSTL3 0.025 follistatin-like 3 glycoprotein precursor CDC2L1 0.025 cell division cycle 2-like 1 (PITSLRE proteins) isof... CDC2L1 0.025 cell division cycle 2-like 1 (PITSLRE proteins) isof... CDC2L1 0.025 cell division cycle 2-like 1 (PITSLRE proteins) isof... CDC2L2 0.025 cell division cycle 2-like 2 isoform 1 HTATSF1 0.025 HIV-1 Tat specific factor 1 HTATSF1 0.025 HIV-1 Tat specific factor 1 DMP1 0.025 dentin matrix acidic phosphoprotein 1 isoform 2 pre... DMP1 0.024 dentin matrix acidic phosphoprotein 1 isoform 1 precu... LOC100133758 0.024 PREDICTED: hypothetical protein, partial CDC2L1 0.024 cell division cycle 2-like 1 (PITSLRE proteins) isof... CDC2L1 0.024 cell division cycle 2-like 1 (PITSLRE proteins) isof... FLG 0.023 filaggrin LOC283685 0.023 PREDICTED: golgi autoantigen, golgin subfamily a-li... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.