Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: DMP1 Sequence: fasta or formatted (497aa) NCBI GI: 121256621
Description:

dentin matrix acidic phosphoprotein 1 isoform 2 precursor

Referenced in:

Bone and Related Tissues

Other entries for this name:
alt prot [513aa] dentin matrix acidic phosphoprotein 1 isoform 1 precursor
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             2.8         14           1
 C cysteine            0.4          2           1
 D aspartate          13.1         65           3
 E glutamate          14.5         72           2
 F phenylalanine       1.0          5           1
 G glycine             7.8         39           3
 H histidine           2.0         10           1
 I isoleucine          2.0         10           1
 K lysine              3.8         19           1
 L leucine             4.6         23           2
 M methionine          1.2          6           1
 N asparagine          4.8         24           2
 P proline             3.6         18           2
 Q glutamine           6.0         30           1
 R arginine            4.2         21           2
 S serine             20.7        103           3
 T threonine           3.6         18           2
 V valine              1.8          9           2
 W tryptophan          0.6          3           1
 Y tyrosine            1.2          6           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   dentin matrix acidic phosphoprotein 1 isoform 2 pre... 
DMP1                  0.990   dentin matrix acidic phosphoprotein 1 isoform 1 precu...
DSPP                  0.151   dentin sialophosphoprotein preproprotein 
IWS1                  0.077   IWS1 homolog 
RPGR                  0.076   retinitis pigmentosa GTPase regulator isoform C [Hom...
MDN1                  0.068   MDN1, midasin homolog 
RP1L1                 0.063   retinitis pigmentosa 1-like 1 
LEO1                  0.062   Leo1, Paf1/RNA polymerase II complex component, homo...
SETD1B                0.057   SET domain containing 1B 
FLG                   0.056   filaggrin 
EIF5B                 0.056   eukaryotic translation initiation factor 5B 
HTATSF1               0.053   HIV-1 Tat specific factor 1 
HTATSF1               0.053   HIV-1 Tat specific factor 1 
CDC2L2                0.052   cell division cycle 2-like 2 isoform 1 
ACRC                  0.051   ACRC protein 
CDC2L1                0.051   cell division cycle 2-like 1 (PITSLRE proteins) isof...
CDC2L2                0.051   cell division cycle 2-like 2 isoform 4 
AFF4                  0.051   ALL1 fused gene from 5q31 
CDC2L1                0.050   cell division cycle 2-like 1 (PITSLRE proteins) isof...
ATRX                  0.048   transcriptional regulator ATRX isoform 2 
ATRX                  0.048   transcriptional regulator ATRX isoform 1 
CDC2L1                0.048   cell division cycle 2-like 1 (PITSLRE proteins) isof...
SFRS4                 0.048   splicing factor, arginine/serine-rich 4 
GPATCH8               0.047   G patch domain containing 8 
PPIG                  0.047   peptidylprolyl isomerase G 
HRC                   0.047   histidine rich calcium binding protein precursor [Hom...
SMTNL1                0.046   smoothelin-like 1 
SETD1A                0.046   SET domain containing 1A 
YTHDC1                0.043   splicing factor YT521-B isoform 2 
PRPF38B               0.043   PRP38 pre-mRNA processing factor 38 (yeast) domain ...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press