Guide to the Human Genome
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Name: RNF219 Sequence: fasta or formatted (726aa) NCBI GI: 88759348
Description:

ring finger protein 219

Referenced in:

Ring Finger Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             3.7         27           2
 C cysteine            3.2         23           2
 D aspartate           5.8         42           2
 E glutamate           9.5         69           2
 F phenylalanine       2.8         20           2
 G glycine             3.6         26           2
 H histidine           1.9         14           1
 I isoleucine          3.3         24           2
 K lysine              9.1         66           3
 L leucine            10.1         73           2
 M methionine          1.7         12           2
 N asparagine          6.2         45           2
 P proline             4.1         30           2
 Q glutamine           4.3         31           1
 R arginine            3.9         28           1
 S serine             15.4        112           4
 T threonine           5.0         36           1
 V valine              4.4         32           2
 W tryptophan          0.8          6           1
 Y tyrosine            1.4         10           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   ring finger protein 219 
DSPP                  0.031   dentin sialophosphoprotein preproprotein 
MYH1                  0.021   myosin, heavy chain 1, skeletal muscle, adult [Homo...
MYH2                  0.021   myosin, heavy chain 2, skeletal muscle, adult [Homo...
MYH2                  0.021   myosin, heavy chain 2, skeletal muscle, adult [Homo...
TPR                   0.020   nuclear pore complex-associated protein TPR 
C6orf97               0.019   hypothetical protein LOC80129 
BRCA1                 0.019   breast cancer 1, early onset isoform 5 
BRCA1                 0.019   breast cancer 1, early onset isoform 4 
MYH10                 0.018   myosin, heavy polypeptide 10, non-muscle 
SMC1A                 0.018   structural maintenance of chromosomes 1A 
MYH4                  0.018   myosin, heavy polypeptide 4, skeletal muscle 
KTN1                  0.017   kinectin 1 isoform b 
MYH13                 0.017   myosin, heavy polypeptide 13, skeletal muscle [Homo...
MYO18A                0.017   myosin 18A isoform b 
CCDC18                0.016   sarcoma antigen NY-SAR-41 
MIA3                  0.016   melanoma inhibitory activity family, member 3 [Homo...
C10orf118             0.016   CTCL tumor antigen L14-2 
RNFT2                 0.016   transmembrane protein 118 isoform 1 
RNFT1                 0.015   PTD016 protein 
KTN1                  0.015   kinectin 1 isoform a 
KTN1                  0.015   kinectin 1 isoform c 
KTN1                  0.015   kinectin 1 isoform a 
CCDC88C               0.015   DVL-binding protein DAPLE 
GCC2                  0.015   GRIP and coiled-coil domain-containing 2 
TMF1                  0.015   TATA element modulatory factor 1 
MYH3                  0.015   myosin, heavy chain 3, skeletal muscle, embryonic [H...
KIAA1524              0.015   p90 autoantigen 
ROCK2                 0.015   Rho-associated, coiled-coil containing protein kinas...
FHAD1                 0.015   forkhead-associated (FHA) phosphopeptide binding do...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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